RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 PCDHA4Q9UN74 947 aa12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 NALCNQ8IZF0 1738 aa12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 ANO9A1A5B4 782 aa12.58□□□□□ -0.39
PCDHGA11-203ENST00000622044 TARSL2A2RTX5 802 aaKnown RBP12.58□□□□□ -0.39
PCDHGA11-203ENST00000622044 DDAH1O94760 285 aa12.58□□□□□ -0.39
PCDHGA11-203ENST00000622044 SLC44A5Q8NCS7 719 aa12.58□□□□□ -0.39
PCDHGA11-203ENST00000622044 PLCD4Q9BRC7 762 aa12.58□□□□□ -0.39
PCDHGA11-203ENST00000622044 RAB34Q9BZG1 259 aa12.58□□□□□ -0.39
PCDHGA11-203ENST00000622044 TROAPQ12815 778 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 DNAAF5Q86Y56 855 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 KSR1Q8IVT5 923 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 MAPKAPK5Q8IW41 473 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 ELOA2Q8IYF1 753 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 FAM133AQ8N9E0 248 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 DHTKD1Q96HY7 919 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 BAIAP2L1Q9UHR4 511 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 LMTK3Q96Q04 1460 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 ABCC6O95255 1503 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 SRGNP10124 158 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 RPS6KA1Q15418 735 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 MSL1Q68DK7 614 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 EMBQ6PCB8 327 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 ARFGAP2Q8N6H7 521 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 SPATA20Q8TB22 786 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 RNPC3Q96LT9 517 aaKnown RBP12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 CEP89Q96ST8 783 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 PLAAQ9Y263 795 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 LTN1O94822 1766 aa12.58□□□□□ -0.4
PCDHGA11-203ENST00000622044 KRT13P13646 458 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 PRDX5P30044 214 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 TRAPPC10P48553 1259 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 NAA25Q14CX7 972 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 PAPD7Q5XG87 772 aaKnown RBP12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 SH3RF1Q7Z6J0 888 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 CD248Q9HCU0 757 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 FAM205AQ6ZU69 1335 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 A0A1W2PQC6 194 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 KLRF2D3W0D1 207 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 PFKFB3Q16875 520 aaPredicted RBP12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 C8orf37Q96NL8 207 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 DNAJC7Q99615 494 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 NCAPGQ9BPX3 1015 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 RGPD2P0DJD1 1756 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 UBAP1LF5GYI3 381 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 MPHOSPH10O00566 681 aaKnown RBP12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 GNAQP50148 359 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 LLGL1Q15334 1064 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 VWA3BQ502W6 1294 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 HERC4Q5GLZ8 1057 aaPredicted RBP12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 CCDC25Q86WR0 208 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 DDX42Q86XP3 938 aaKnown RBP eCLIP12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 RETREG2Q8NC44 543 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 TGFBRAP1Q8WUH2 860 aa12.57□□□□□ -0.4
PCDHGA11-203ENST00000622044 POTEMA6NI47 508 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 TMEM110-MUSTN1A8MSY1 372 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 ADAMTS3O15072 1205 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 IL17AQ16552 155 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 CALCRLQ16602 461 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 DAAM2Q86T65 1068 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 PDS5AQ29RF7 1337 aaKnown RBP12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 CNTNAP5Q8WYK1 1306 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 FAM153BP0C7A2 387 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 SEC23AQ15436 765 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 FAM153CQ494X1 144 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 USP17L2Q6R6M4 530 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 IRF2BP1Q8IU81 584 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 SH2D4AQ9H788 454 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 GPCPD1Q9NPB8 672 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 FAM153AQ9UHL3 310 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 FRMPD2Q68DX3 1309 aaPredicted RBP12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 WDR17Q8IZU2 1322 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 VIMP08670 466 aaKnown RBP12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 EZRP15311 586 aaKnown RBP12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 LSP1P33241 339 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 HDLBPQ00341 1268 aaKnown RBP12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 ASIC2Q16515 512 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 SMIM5Q71RC9 77 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 TBCKQ8TEA7 893 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 ARHGAP20Q9P2F6 1191 aa12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 NOVA2Q9UNW9 492 aaKnown RBP12.56□□□□□ -0.4
PCDHGA11-203ENST00000622044 PRPF6O94906 941 aaKnown RBP12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 CCDC172P0C7W6 258 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 ABCB4P21439 1286 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 TMOD1P28289 359 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 GNA11P29992 359 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 TRIM28Q13263 835 aaKnown RBP12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 PICALMQ13492 652 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 MAN2A1Q16706 1144 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 ALS2CLQ60I27 953 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 ARL6IP4Q66PJ3 421 aaKnown RBP12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 TRIM9Q9C026 710 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 KRIT1O00522 736 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 EPHB6O15197 1021 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 BUB1BO60566 1050 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 GLI1P08151 1106 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 IFNAR2P48551 515 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 AARSP49588 968 aaKnown RBP eCLIP12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 NEK8Q86SG6 692 aa12.55□□□□□ -0.4
PCDHGA11-203ENST00000622044 VPS36Q86VN1 386 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms