RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 BAZ2BQ9UIF8 2168 aaKnown RBP14.65□□□□□ -0.06
FOXN3-219ENST00000615335 A0A1W2PRG0 241 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 USP17L5A8MUK1 530 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 IRF6O14896 467 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 PPP6R2O75170 966 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 PLEKHA8P1O95397 391 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 PARP1P09874 1014 aaKnown RBP14.64□□□□□ -0.07
FOXN3-219ENST00000615335 PDHBP11177 359 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 GRM4Q14833 912 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 NCAPHQ15003 741 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 STAG2Q8N3U4 1231 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 ACER1Q8TDN7 264 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 ZNF408Q9H9D4 720 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 GINM1Q9NU53 330 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 MAD2L2Q9UI95 211 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 IKBKBO14920 756 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 IREB2P48200 963 aaKnown RBP14.64□□□□□ -0.07
FOXN3-219ENST00000615335 TRIM29Q14134 588 aa14.64□□□□□ -0.07
FOXN3-219ENST00000615335 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.64□□□□□ -0.07
FOXN3-219ENST00000615335 KLHL33A6NCF5 533 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 F5H6K3 240 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 IFNAR1P17181 557 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 SFPQP23246 707 aaKnown RBP eCLIP14.63□□□□□ -0.072e-6■□□□□ 10.4
FOXN3-219ENST00000615335 IRX1P78414 480 aaPredicted RBP14.63□□□□□ -0.07
FOXN3-219ENST00000615335 MAP3K9P80192 1104 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 KLRC3Q07444 240 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 LONRF2Q1L5Z9 754 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 HNRNPLLQ8WVV9 542 aaKnown RBP14.63□□□□□ -0.07
FOXN3-219ENST00000615335 PLCD4Q9BRC7 762 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 CARD6Q9BX69 1037 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 SLC26A6Q9BXS9 759 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 GPBP1L1Q9HC44 474 aaPredicted RBP14.63□□□□□ -0.07
FOXN3-219ENST00000615335 HPSEQ9Y251 543 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 TMX2Q9Y320 296 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 FRMPD2Q68DX3 1309 aaPredicted RBP14.63□□□□□ -0.07
FOXN3-219ENST00000615335 DOCK1Q14185 1865 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 FMR1Q06787 632 aaKnown RBP eCLIP14.63□□□□□ -0.07
FOXN3-219ENST00000615335 SSRP1Q08945 709 aaKnown RBP14.63□□□□□ -0.07
FOXN3-219ENST00000615335 PTPAQ15257 358 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 ZKSCAN8Q15776 578 aaPredicted RBP14.63□□□□□ -0.07
FOXN3-219ENST00000615335 ZYXQ15942 572 aaKnown RBP14.63□□□□□ -0.07
FOXN3-219ENST00000615335 SLFN13Q68D06 897 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 ISM2Q6H9L7 571 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 ARMCX5Q6P1M9 558 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 FOXR1Q6PIV2 292 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 LRRC31Q6UY01 552 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 GBP6Q6ZN66 633 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 TMTC3Q6ZXV5 915 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 TRIM22Q8IYM9 498 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 SH2D4AQ9H788 454 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 TUBE1Q9UJT0 475 aa14.63□□□□□ -0.07
FOXN3-219ENST00000615335 PALM3A6NDB9 673 aaPredicted RBP14.62□□□□□ -0.07
FOXN3-219ENST00000615335 KLRF2D3W0D1 207 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 HNRNPH1P31943 449 aaKnown RBP14.62□□□□□ -0.07
FOXN3-219ENST00000615335 SLC1A4P43007 532 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 GNAQP50148 359 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 FANCCQ00597 558 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 CCDC96Q2M329 555 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 SHC4Q6S5L8 630 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 MOB2Q70IA6 237 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 HDXQ7Z353 690 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 SPICE1Q8N0Z3 855 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 SRBD1Q8N5C6 995 aaKnown RBP14.62□□□□□ -0.07
FOXN3-219ENST00000615335 GMCL1P1Q8NEA9 526 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 GOPCQ9HD26 462 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 CSADQ9Y600 493 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 H0YHG0 523 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 URI1O94763 535 aaPredicted RBP14.62□□□□□ -0.07
FOXN3-219ENST00000615335 SNHG28P0DPA3 235 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 PTPRAP18433 802 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 SARNPP82979 210 aaKnown RBP14.62□□□□□ -0.07
FOXN3-219ENST00000615335 VGLL4Q14135 290 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.62□□□□□ -0.07
FOXN3-219ENST00000615335 KCTD1Q719H9 257 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 GPCPD1Q9NPB8 672 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 SYNPO2Q9UMS6 1093 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 ZHX2Q9Y6X8 837 aa14.62□□□□□ -0.07
FOXN3-219ENST00000615335 FAM237AA0A1B0GTK4 181 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 FMNL1O95466 1100 aaPredicted RBP14.61□□□□□ -0.07
FOXN3-219ENST00000615335 AKAP17AQ02040 695 aaKnown RBP14.61□□□□□ -0.07
FOXN3-219ENST00000615335 ASPRV1Q53RT3 343 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 RSRC2Q7L4I2 434 aaKnown RBP14.61□□□□□ -0.07
FOXN3-219ENST00000615335 ARMC9Q7Z3E5 817 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 FMNL3Q8IVF7 1028 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 FAM71BQ8TC56 605 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 MIEF2Q96C03 454 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 PARD6BQ9BYG5 372 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 AS3MTQ9HBK9 375 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 hCG_1642624A0A1W2PR95 340 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 POTEB2H3BUK9 544 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 CUTAO60888 179 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 NDUFB10O96000 172 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 ZNF543Q08ER8 600 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 NEDD9Q14511 834 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 NOL9Q5SY16 702 aaKnown RBP14.61□□□□□ -0.07
FOXN3-219ENST00000615335 RESP18Q5W5W9 173 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 POTEDQ86YR6 584 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 LZTS2Q9BRK4 669 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 CPVLQ9H3G5 476 aa14.61□□□□□ -0.07
FOXN3-219ENST00000615335 ACBD3Q9H3P7 528 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms