RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 BICD2Q8TD16 824 aa16.48■□□□□ 0.23
VRK3-213ENST00000597215 ARMC5Q96C12 935 aa16.48■□□□□ 0.23
VRK3-213ENST00000597215 TAAR1Q96RJ0 339 aa16.48■□□□□ 0.23
VRK3-213ENST00000597215 KIF3AQ9Y496 699 aa16.48■□□□□ 0.23
VRK3-213ENST00000597215 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.48■□□□□ 0.23
VRK3-213ENST00000597215 CYP2C19P33261 490 aa16.47■□□□□ 0.23
VRK3-213ENST00000597215 CUL4AQ13619 759 aa16.47■□□□□ 0.23
VRK3-213ENST00000597215 ARHGEF16Q5VV41 709 aa16.47■□□□□ 0.23
VRK3-213ENST00000597215 MCTP2Q6DN12 878 aa16.47■□□□□ 0.23
VRK3-213ENST00000597215 GALNT17Q6IS24 598 aa16.47■□□□□ 0.23
VRK3-213ENST00000597215 SHISA4Q96DD7 197 aa16.47■□□□□ 0.23
VRK3-213ENST00000597215 IWS1Q96ST2 819 aa16.47■□□□□ 0.23
VRK3-213ENST00000597215 EHMT1Q9H9B1 1298 aa16.47■□□□□ 0.23
VRK3-213ENST00000597215 PXMP2Q9NR77 195 aa16.47■□□□□ 0.23
VRK3-213ENST00000597215 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.47■□□□□ 0.23
VRK3-213ENST00000597215 LRRC37A2A6NM11 1700 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 SPDYE3A6NKU9 549 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 FOSP01100 380 aaPredicted RBP16.46■□□□□ 0.23
VRK3-213ENST00000597215 PRKAR2AP13861 404 aaKnown RBP16.46■□□□□ 0.23
VRK3-213ENST00000597215 EIF2AK2P19525 551 aaKnown RBP16.46■□□□□ 0.23
VRK3-213ENST00000597215 EDNRBP24530 442 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 CACNB2Q08289 660 aaPredicted RBP16.46■□□□□ 0.23
VRK3-213ENST00000597215 PDE4DQ08499 809 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 TRIM32Q13049 653 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 AP3B2Q13367 1082 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 TRIM29Q14134 588 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 MAP3K21Q5TCX8 1036 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 MORC4Q8TE76 937 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 ZNF333Q96JL9 665 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 NRBP1Q9UHY1 535 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 PCDHA4Q9UN74 947 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 SMC3Q9UQE7 1217 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 CNPY2Q9Y2B0 182 aa16.46■□□□□ 0.23
VRK3-213ENST00000597215 FRMPD4Q14CM0 1322 aa16.45■□□□□ 0.22
VRK3-213ENST00000597215 SNAI1O95863 264 aaPredicted RBP16.45■□□□□ 0.22
VRK3-213ENST00000597215 CLK2P49760 499 aaKnown RBP16.45■□□□□ 0.22
VRK3-213ENST00000597215 REXO1Q8N1G1 1221 aaKnown RBP16.45■□□□□ 0.22
VRK3-213ENST00000597215 DAGLBQ8NCG7 672 aa16.45■□□□□ 0.22
VRK3-213ENST00000597215 PDCD2LQ9BRP1 358 aa16.45■□□□□ 0.22
VRK3-213ENST00000597215 PHF20Q9BVI0 1012 aa16.45■□□□□ 0.22
VRK3-213ENST00000597215 ABHD16BQ9H3Z7 469 aa16.45■□□□□ 0.22
VRK3-213ENST00000597215 PCDHA6Q9UN73 950 aa16.45■□□□□ 0.22
VRK3-213ENST00000597215 PCDHA8Q9Y5H6 950 aa16.45■□□□□ 0.22
VRK3-213ENST00000597215 RPTORQ8N122 1335 aa16.45■□□□□ 0.22
VRK3-213ENST00000597215 NR3C2P08235 984 aa16.44■□□□□ 0.22
VRK3-213ENST00000597215 CYBAP13498 195 aa16.44■□□□□ 0.22
VRK3-213ENST00000597215 TNS4Q8IZW8 715 aa16.44■□□□□ 0.22
VRK3-213ENST00000597215 BLIDQ8IZY5 108 aa16.44■□□□□ 0.22
VRK3-213ENST00000597215 INTS4Q96HW7 963 aaKnown RBP16.44■□□□□ 0.22
VRK3-213ENST00000597215 C8orf76Q96K31 380 aa16.44■□□□□ 0.22
VRK3-213ENST00000597215 BRMS1Q9HCU9 246 aa16.44■□□□□ 0.22
VRK3-213ENST00000597215 HMX1Q9NP08 348 aaPredicted RBP16.44■□□□□ 0.22
VRK3-213ENST00000597215 KCNJ14Q9UNX9 436 aa16.44■□□□□ 0.22
VRK3-213ENST00000597215 GJB2P29033 226 aa16.43■□□□□ 0.22
VRK3-213ENST00000597215 CCND2P30279 289 aa16.43■□□□□ 0.22
VRK3-213ENST00000597215 FOSBP53539 338 aa16.43■□□□□ 0.22
VRK3-213ENST00000597215 ACVR2BQ13705 512 aa16.43■□□□□ 0.22
VRK3-213ENST00000597215 PGM5Q15124 567 aa16.43■□□□□ 0.22
VRK3-213ENST00000597215 STXBP2Q15833 593 aa16.43■□□□□ 0.22
VRK3-213ENST00000597215 PRAMEF19Q5SWL8 479 aa16.43■□□□□ 0.22
VRK3-213ENST00000597215 JAKMIP3Q5VZ66 844 aa16.43■□□□□ 0.22
VRK3-213ENST00000597215 ANO3Q9BYT9 981 aa16.43■□□□□ 0.22
VRK3-213ENST00000597215 VTA1Q9NP79 307 aa16.43■□□□□ 0.22
VRK3-213ENST00000597215 GJB4Q9NTQ9 266 aa16.43■□□□□ 0.22
VRK3-213ENST00000597215 TMEM260Q9NX78 707 aa16.43■□□□□ 0.22
VRK3-213ENST00000597215 ZHX1Q9UKY1 873 aaPredicted RBP16.43■□□□□ 0.22
VRK3-213ENST00000597215 DDX49Q9Y6V7 483 aaKnown RBP16.43■□□□□ 0.22
VRK3-213ENST00000597215 MMP1P03956 469 aa16.42■□□□□ 0.22
VRK3-213ENST00000597215 MYCLP12524 364 aaPredicted RBP16.42■□□□□ 0.22
VRK3-213ENST00000597215 CCL5P13501 91 aa16.42■□□□□ 0.22
VRK3-213ENST00000597215 CNGA1P29973 690 aa16.42■□□□□ 0.22
VRK3-213ENST00000597215 MTFR1Q15390 333 aa16.42■□□□□ 0.22
VRK3-213ENST00000597215 NPY5RQ15761 445 aa16.42■□□□□ 0.22
VRK3-213ENST00000597215 KRT40Q6A162 431 aa16.42■□□□□ 0.22
VRK3-213ENST00000597215 XRRA1Q6P2D8 792 aa16.42■□□□□ 0.22
VRK3-213ENST00000597215 FBXO16Q8IX29 292 aaPredicted RBP16.42■□□□□ 0.22
VRK3-213ENST00000597215 TRPV1Q8NER1 839 aa16.42■□□□□ 0.22
VRK3-213ENST00000597215 IL31RAQ8NI17 732 aa16.42■□□□□ 0.22
VRK3-213ENST00000597215 RASGRP4Q8TDF6 673 aa16.42■□□□□ 0.22
VRK3-213ENST00000597215 PGBD1Q96JS3 809 aa16.42■□□□□ 0.22
VRK3-213ENST00000597215 KATNBL1Q9H079 304 aa16.42■□□□□ 0.22
VRK3-213ENST00000597215 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.42■□□□□ 0.22
VRK3-213ENST00000597215 UNC93B1Q9H1C4 597 aa16.42■□□□□ 0.22
VRK3-213ENST00000597215 ADAMTS3O15072 1205 aa16.41■□□□□ 0.22
VRK3-213ENST00000597215 EIF3JO75822 258 aaKnown RBP16.41■□□□□ 0.22
VRK3-213ENST00000597215 STAM2O75886 525 aa16.41■□□□□ 0.22
VRK3-213ENST00000597215 MYCP01106 439 aaPredicted RBP16.41■□□□□ 0.22
VRK3-213ENST00000597215 ZNF865P0CJ78 1059 aaPredicted RBP16.41■□□□□ 0.22
VRK3-213ENST00000597215 CCND3P30281 292 aaPredicted RBP16.41■□□□□ 0.22
VRK3-213ENST00000597215 KRT2P35908 639 aa16.41■□□□□ 0.22
VRK3-213ENST00000597215 SREBF1P36956 1147 aa16.41■□□□□ 0.22
VRK3-213ENST00000597215 SAFBQ15424 915 aaKnown RBP eCLIP16.41■□□□□ 0.22
VRK3-213ENST00000597215 PCNX4Q63HM2 1172 aa16.41■□□□□ 0.22
VRK3-213ENST00000597215 EEPD1Q7L9B9 569 aa16.41■□□□□ 0.22
VRK3-213ENST00000597215 VSIG10LQ86VR7 867 aa16.41■□□□□ 0.22
VRK3-213ENST00000597215 ABHD8Q96I13 439 aa16.41■□□□□ 0.22
VRK3-213ENST00000597215 RNF208Q9H0X6 261 aa16.41■□□□□ 0.22
VRK3-213ENST00000597215 KIAA1217Q5T5P2 1943 aa16.41■□□□□ 0.22
VRK3-213ENST00000597215 M0R2N6 131 aa16.4■□□□□ 0.22
VRK3-213ENST00000597215 SEPT4O43236 478 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms