RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 SCFD2Q8WU76 684 aa20.52■□□□□ 0.88
RETREG3-212ENST00000593251 TTC14Q96N46 770 aa20.52■□□□□ 0.88
RETREG3-212ENST00000593251 ASB2Q96Q27 587 aa20.52■□□□□ 0.88
RETREG3-212ENST00000593251 LNPKQ9C0E8 428 aa20.52■□□□□ 0.88
RETREG3-212ENST00000593251 UBA5Q9GZZ9 404 aa20.52■□□□□ 0.88
RETREG3-212ENST00000593251 PCDHA11Q9Y5I1 949 aa20.52■□□□□ 0.88
RETREG3-212ENST00000593251 MYH7BA7E2Y1 1941 aa20.52■□□□□ 0.88
RETREG3-212ENST00000593251 WDR19Q8NEZ3 1342 aa20.52■□□□□ 0.87
RETREG3-212ENST00000593251 ARIH2O95376 493 aa20.51■□□□□ 0.87
RETREG3-212ENST00000593251 TXNP10599 105 aaKnown RBP20.51■□□□□ 0.87
RETREG3-212ENST00000593251 BRDTQ58F21 947 aaPredicted RBP20.51■□□□□ 0.87
RETREG3-212ENST00000593251 MPHOSPH6Q99547 160 aaKnown RBP20.51■□□□□ 0.87
RETREG3-212ENST00000593251 RAD50Q92878 1312 aa20.51■□□□□ 0.87
RETREG3-212ENST00000593251 A6NJR5 290 aa20.5■□□□□ 0.87
RETREG3-212ENST00000593251 RFXAPO00287 272 aa20.5■□□□□ 0.87
RETREG3-212ENST00000593251 NKRFO15226 690 aaKnown RBP eCLIP20.5■□□□□ 0.87
RETREG3-212ENST00000593251 PFKMP08237 780 aa20.5■□□□□ 0.87
RETREG3-212ENST00000593251 HDAC1Q13547 482 aaPredicted RBP20.5■□□□□ 0.87
RETREG3-212ENST00000593251 DNERQ8NFT8 737 aa20.5■□□□□ 0.87
RETREG3-212ENST00000593251 TBC1D5Q92609 795 aa20.5■□□□□ 0.87
RETREG3-212ENST00000593251 CERS4Q9HA82 394 aa20.5■□□□□ 0.87
RETREG3-212ENST00000593251 PNMA2Q9UL42 364 aa20.5■□□□□ 0.87
RETREG3-212ENST00000593251 CA3P07451 260 aa20.49■□□□□ 0.87
RETREG3-212ENST00000593251 MRPS5P82675 430 aaKnown RBP20.49■□□□□ 0.87
RETREG3-212ENST00000593251 ADAMTS19Q8TE59 1207 aa20.49■□□□□ 0.87
RETREG3-212ENST00000593251 PCP11498 1178 aaKnown RBP20.48■□□□□ 0.87
RETREG3-212ENST00000593251 TMEM67Q5HYA8 995 aa20.48■□□□□ 0.87
RETREG3-212ENST00000593251 GPATCH4Q5T3I0 446 aaKnown RBP20.48■□□□□ 0.87
RETREG3-212ENST00000593251 B4GALNT3Q6L9W6 998 aa20.48■□□□□ 0.87
RETREG3-212ENST00000593251 NFRKBQ6P4R8 1299 aa20.48■□□□□ 0.87
RETREG3-212ENST00000593251 ESR2Q92731 530 aa20.48■□□□□ 0.87
RETREG3-212ENST00000593251 FTOQ9C0B1 505 aaKnown RBP eCLIP20.48■□□□□ 0.875e-9■■■■□ 21.6
RETREG3-212ENST00000593251 RNF41Q9H4P4 317 aaPredicted RBP20.48■□□□□ 0.87
RETREG3-212ENST00000593251 XIRP2A4UGR9 3374 aa20.48■□□□□ 0.87
RETREG3-212ENST00000593251 PRRC2BQ5JSZ5 2229 aaKnown RBP20.47■□□□□ 0.87
RETREG3-212ENST00000593251 KPNA6O60684 536 aa20.47■□□□□ 0.87
RETREG3-212ENST00000593251 IQCF3P0C7M6 154 aa20.47■□□□□ 0.87
RETREG3-212ENST00000593251 ACTN1P12814 892 aa20.47■□□□□ 0.87
RETREG3-212ENST00000593251 SDSP20132 328 aa20.47■□□□□ 0.87
RETREG3-212ENST00000593251 CDC37Q16543 378 aaPredicted RBP20.47■□□□□ 0.87
RETREG3-212ENST00000593251 RETREG2Q8NC44 543 aa20.47■□□□□ 0.87
RETREG3-212ENST00000593251 PNMA1Q8ND90 353 aa20.47■□□□□ 0.87
RETREG3-212ENST00000593251 TAAR1Q96RJ0 339 aa20.47■□□□□ 0.87
RETREG3-212ENST00000593251 COL20A1Q9P218 1284 aa20.47■□□□□ 0.87
RETREG3-212ENST00000593251 NOD1Q9Y239 953 aa20.47■□□□□ 0.87
RETREG3-212ENST00000593251 COL4A4P53420 1690 aaPredicted RBP20.46■□□□□ 0.87
RETREG3-212ENST00000593251 B4DLN1 442 aa20.46■□□□□ 0.87
RETREG3-212ENST00000593251 RBAK-RBAKDNI3L0D1 243 aa20.46■□□□□ 0.87
RETREG3-212ENST00000593251 ZNF213O14771 459 aa20.46■□□□□ 0.87
RETREG3-212ENST00000593251 KDM4AO75164 1064 aa20.46■□□□□ 0.87
RETREG3-212ENST00000593251 RFC2P35250 354 aa20.46■□□□□ 0.87
RETREG3-212ENST00000593251 MRPL12P52815 198 aaKnown RBP20.46■□□□□ 0.87
RETREG3-212ENST00000593251 LY6KQ17RY6 165 aa20.46■□□□□ 0.87
RETREG3-212ENST00000593251 CCDC62Q6P9F0 684 aa20.46■□□□□ 0.87
RETREG3-212ENST00000593251 SEPT14Q6ZU15 432 aa20.46■□□□□ 0.87
RETREG3-212ENST00000593251 CHST3Q7LGC8 479 aa20.46■□□□□ 0.87
RETREG3-212ENST00000593251 DGKHQ86XP1 1220 aa20.46■□□□□ 0.87
RETREG3-212ENST00000593251 TICAM2Q86XR7 235 aa20.46■□□□□ 0.87
RETREG3-212ENST00000593251 AFG1LQ8WV93 481 aa20.46■□□□□ 0.87
RETREG3-212ENST00000593251 EPOPA6NHQ4 379 aa20.45■□□□□ 0.86
RETREG3-212ENST00000593251 PITPNM1O00562 1244 aa20.45■□□□□ 0.86
RETREG3-212ENST00000593251 ARHGEF15O94989 841 aa20.45■□□□□ 0.86
RETREG3-212ENST00000593251 MFAP1P55081 439 aaKnown RBP20.45■□□□□ 0.86
RETREG3-212ENST00000593251 TFF2Q03403 129 aa20.45■□□□□ 0.86
RETREG3-212ENST00000593251 PTPN11Q06124 597 aaPredicted RBP20.45■□□□□ 0.86
RETREG3-212ENST00000593251 BFSP2Q13515 415 aa20.45■□□□□ 0.86
RETREG3-212ENST00000593251 PTGISQ16647 500 aa20.45■□□□□ 0.86
RETREG3-212ENST00000593251 CWC27Q6UX04 472 aaKnown RBP20.45■□□□□ 0.86
RETREG3-212ENST00000593251 ADGRF4Q8IZF3 695 aa20.45■□□□□ 0.86
RETREG3-212ENST00000593251 RGS22Q8NE09 1264 aa20.45■□□□□ 0.86
RETREG3-212ENST00000593251 IL27Q8NEV9 243 aa20.45■□□□□ 0.86
RETREG3-212ENST00000593251 SYTL5Q8TDW5 730 aaPredicted RBP20.45■□□□□ 0.86
RETREG3-212ENST00000593251 SLC9A7Q96T83 725 aa20.45■□□□□ 0.86
RETREG3-212ENST00000593251 UHRF1Q96T88 793 aaPredicted RBP20.45■□□□□ 0.86
RETREG3-212ENST00000593251 KAT14Q9H8E8 782 aa20.45■□□□□ 0.86
RETREG3-212ENST00000593251 B4E1Z4 1266 aa20.44■□□□□ 0.86
RETREG3-212ENST00000593251 MMP3P08254 477 aa20.44■□□□□ 0.86
RETREG3-212ENST00000593251 ARHGAP1Q07960 439 aa20.44■□□□□ 0.86
RETREG3-212ENST00000593251 KRT40Q6A162 431 aa20.44■□□□□ 0.86
RETREG3-212ENST00000593251 GDF6Q6KF10 455 aaPredicted RBP20.44■□□□□ 0.86
RETREG3-212ENST00000593251 TSPYL2Q9H2G4 693 aaPredicted RBP20.44■□□□□ 0.86
RETREG3-212ENST00000593251 VAT1LQ9HCJ6 419 aa20.44■□□□□ 0.86
RETREG3-212ENST00000593251 ABCB11O95342 1321 aa20.44■□□□□ 0.86
RETREG3-212ENST00000593251 DHX16O60231 1041 aaKnown RBP20.43■□□□□ 0.86
RETREG3-212ENST00000593251 GH1P01241 217 aa20.43■□□□□ 0.86
RETREG3-212ENST00000593251 COL9A1P20849 921 aa20.43■□□□□ 0.86
RETREG3-212ENST00000593251 SKIV2LQ15477 1246 aaKnown RBP20.43■□□□□ 0.86
RETREG3-212ENST00000593251 QRICH1Q2TAL8 776 aa20.43■□□□□ 0.86
RETREG3-212ENST00000593251 IQCA1Q86XH1 822 aa20.43■□□□□ 0.86
RETREG3-212ENST00000593251 HERC6Q8IVU3 1022 aa20.43■□□□□ 0.86
RETREG3-212ENST00000593251 KAT2BQ92831 832 aa20.43■□□□□ 0.86
RETREG3-212ENST00000593251 NECAB3Q96P71 396 aaPredicted RBP20.43■□□□□ 0.86
RETREG3-212ENST00000593251 CTAGE1Q96RT6 745 aa20.43■□□□□ 0.86
RETREG3-212ENST00000593251 MTCH2Q9Y6C9 303 aa20.43■□□□□ 0.86
RETREG3-212ENST00000593251 TAP1Q03518 808 aa20.42■□□□□ 0.86
RETREG3-212ENST00000593251 SPRED2Q7Z698 418 aa20.42■□□□□ 0.86
RETREG3-212ENST00000593251 TMCO2Q7Z6W1 182 aaPredicted RBP20.42■□□□□ 0.86
RETREG3-212ENST00000593251 PLEKHM2Q8IWE5 1019 aa20.42■□□□□ 0.86
RETREG3-212ENST00000593251 ENAHQ8N8S7 591 aaPredicted RBP20.42■□□□□ 0.86
RETREG3-212ENST00000593251 NSUN6Q8TEA1 469 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms