RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 ZMYM6O95789 1325 aa21.52■■□□□ 1.03
CIRBP-238ENST00000592412 WDR19Q8NEZ3 1342 aa21.52■■□□□ 1.03
CIRBP-238ENST00000592412 PTPRSQ13332 1948 aa21.51■■□□□ 1.03
CIRBP-238ENST00000592412 PITPNM1O00562 1244 aa21.51■■□□□ 1.03
CIRBP-238ENST00000592412 NKRFO15226 690 aaKnown RBP eCLIP21.51■■□□□ 1.03
CIRBP-238ENST00000592412 PDE1AP54750 535 aa21.51■■□□□ 1.03
CIRBP-238ENST00000592412 HAND2P61296 217 aa21.51■■□□□ 1.03
CIRBP-238ENST00000592412 PDE4DQ08499 809 aa21.51■■□□□ 1.03
CIRBP-238ENST00000592412 KRT40Q6A162 431 aa21.51■■□□□ 1.03
CIRBP-238ENST00000592412 SPRED2Q7Z698 418 aa21.51■■□□□ 1.03
CIRBP-238ENST00000592412 SCFD2Q8WU76 684 aa21.51■■□□□ 1.03
CIRBP-238ENST00000592412 CTAGE1Q96RT6 745 aa21.51■■□□□ 1.03
CIRBP-238ENST00000592412 CPVLQ9H3G5 476 aa21.51■■□□□ 1.03
CIRBP-238ENST00000592412 GPHNQ9NQX3 736 aaPredicted RBP21.51■■□□□ 1.03
CIRBP-238ENST00000592412 RBAK-RBAKDNI3L0D1 243 aa21.5■■□□□ 1.03
CIRBP-238ENST00000592412 RFC2P35250 354 aa21.5■■□□□ 1.03
CIRBP-238ENST00000592412 KCNQ1P51787 676 aa21.5■■□□□ 1.03
CIRBP-238ENST00000592412 MCMDC2Q4G0Z9 681 aa21.5■■□□□ 1.03
CIRBP-238ENST00000592412 TBC1D10CQ8IV04 446 aa21.5■■□□□ 1.03
CIRBP-238ENST00000592412 DNERQ8NFT8 737 aa21.5■■□□□ 1.03
CIRBP-238ENST00000592412 SLC9A7Q96T83 725 aa21.5■■□□□ 1.03
CIRBP-238ENST00000592412 TXNP10599 105 aaKnown RBP21.49■■□□□ 1.03
CIRBP-238ENST00000592412 TAP1Q03518 808 aa21.49■■□□□ 1.03
CIRBP-238ENST00000592412 PTPN11Q06124 597 aaPredicted RBP21.49■■□□□ 1.03
CIRBP-238ENST00000592412 NMIQ13287 307 aaPredicted RBP21.49■■□□□ 1.03
CIRBP-238ENST00000592412 GPNMBQ14956 572 aa21.49■■□□□ 1.03
CIRBP-238ENST00000592412 ANKRD45Q5TZF3 282 aa21.49■■□□□ 1.03
CIRBP-238ENST00000592412 CCDC62Q6P9F0 684 aa21.49■■□□□ 1.03
CIRBP-238ENST00000592412 GOLGA8HP0CJ92 632 aa21.48■■□□□ 1.03
CIRBP-238ENST00000592412 ACTN1P12814 892 aa21.48■■□□□ 1.03
CIRBP-238ENST00000592412 HERC6Q8IVU3 1022 aa21.48■■□□□ 1.03
CIRBP-238ENST00000592412 PHOSPHO2Q8TCD6 241 aa21.48■■□□□ 1.03
CIRBP-238ENST00000592412 TBC1D5Q92609 795 aa21.48■■□□□ 1.03
CIRBP-238ENST00000592412 TTC14Q96N46 770 aa21.48■■□□□ 1.03
CIRBP-238ENST00000592412 NEDD4P46934 1319 aa21.48■■□□□ 1.03
CIRBP-238ENST00000592412 RAD50Q92878 1312 aa21.48■■□□□ 1.03
CIRBP-238ENST00000592412 KPNA6O60684 536 aa21.47■■□□□ 1.03
CIRBP-238ENST00000592412 USH1GQ495M9 461 aa21.47■■□□□ 1.03
CIRBP-238ENST00000592412 BRDTQ58F21 947 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-238ENST00000592412 TSPYL2Q9H2G4 693 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-238ENST00000592412 COL20A1Q9P218 1284 aa21.47■■□□□ 1.03
CIRBP-238ENST00000592412 PNMA2Q9UL42 364 aa21.47■■□□□ 1.03
CIRBP-238ENST00000592412 COL4A4P53420 1690 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-238ENST00000592412 LPXNO60711 386 aa21.46■■□□□ 1.03
CIRBP-238ENST00000592412 RGS22Q8NE09 1264 aa21.46■■□□□ 1.03
CIRBP-238ENST00000592412 IL27Q8NEV9 243 aa21.46■■□□□ 1.03
CIRBP-238ENST00000592412 AFG1LQ8WV93 481 aa21.46■■□□□ 1.03
CIRBP-238ENST00000592412 ARNTL2Q8WYA1 636 aa21.46■■□□□ 1.03
CIRBP-238ENST00000592412 DHX38Q92620 1227 aaKnown RBP21.46■■□□□ 1.03
CIRBP-238ENST00000592412 KAT2BQ92831 832 aa21.46■■□□□ 1.03
CIRBP-238ENST00000592412 ZKSCAN3Q9BRR0 538 aa21.46■■□□□ 1.03
CIRBP-238ENST00000592412 UBA5Q9GZZ9 404 aa21.46■■□□□ 1.03
CIRBP-238ENST00000592412 CCDC171Q6TFL3 1326 aa21.46■■□□□ 1.03
CIRBP-238ENST00000592412 TRIP12Q14669 1992 aaPredicted RBP21.45■■□□□ 1.02
CIRBP-238ENST00000592412 MMP3P08254 477 aa21.45■■□□□ 1.02
CIRBP-238ENST00000592412 ARHGAP1Q07960 439 aa21.45■■□□□ 1.02
CIRBP-238ENST00000592412 BFSP2Q13515 415 aa21.45■■□□□ 1.02
CIRBP-238ENST00000592412 LY6KQ17RY6 165 aa21.45■■□□□ 1.02
CIRBP-238ENST00000592412 GDF6Q6KF10 455 aaPredicted RBP21.45■■□□□ 1.02
CIRBP-238ENST00000592412 MFSD6Q6ZSS7 791 aa21.45■■□□□ 1.02
CIRBP-238ENST00000592412 TMCO2Q7Z6W1 182 aaPredicted RBP21.45■■□□□ 1.02
CIRBP-238ENST00000592412 RETREG2Q8NC44 543 aa21.45■■□□□ 1.02
CIRBP-238ENST00000592412 TAAR1Q96RJ0 339 aa21.45■■□□□ 1.02
CIRBP-238ENST00000592412 FTOQ9C0B1 505 aaKnown RBP eCLIP21.45■■□□□ 1.028e-7■□□□□ 9.3
CIRBP-238ENST00000592412 LCHNA4D1U4 455 aa21.44■■□□□ 1.02
CIRBP-238ENST00000592412 SKIV2LQ15477 1246 aaKnown RBP21.44■■□□□ 1.02
CIRBP-238ENST00000592412 PTGISQ16647 500 aa21.44■■□□□ 1.02
CIRBP-238ENST00000592412 TCTN1Q2MV58 587 aa21.44■■□□□ 1.02
CIRBP-238ENST00000592412 GPATCH4Q5T3I0 446 aaKnown RBP21.44■■□□□ 1.02
CIRBP-238ENST00000592412 SESTD1Q86VW0 696 aa21.44■■□□□ 1.02
CIRBP-238ENST00000592412 SYTL5Q8TDW5 730 aaPredicted RBP21.44■■□□□ 1.02
CIRBP-238ENST00000592412 MPHOSPH6Q99547 160 aaKnown RBP21.44■■□□□ 1.02
CIRBP-238ENST00000592412 GTPBP6O43824 516 aaPredicted RBP21.43■■□□□ 1.02
CIRBP-238ENST00000592412 BAIAP3O94812 1187 aa21.43■■□□□ 1.02
CIRBP-238ENST00000592412 PCP11498 1178 aaKnown RBP21.43■■□□□ 1.02
CIRBP-238ENST00000592412 CHMP4BP1P59074 171 aa21.43■■□□□ 1.02
CIRBP-238ENST00000592412 WDR5P61964 334 aaKnown RBP21.43■■□□□ 1.02
CIRBP-238ENST00000592412 GRB10Q13322 594 aa21.43■■□□□ 1.02
CIRBP-238ENST00000592412 CDC37Q16543 378 aaPredicted RBP21.43■■□□□ 1.02
CIRBP-238ENST00000592412 TICAM2Q86XR7 235 aa21.43■■□□□ 1.02
CIRBP-238ENST00000592412 NOD1Q9Y239 953 aa21.43■■□□□ 1.02
CIRBP-238ENST00000592412 LAMA4Q16363 1823 aa21.43■■□□□ 1.02
CIRBP-238ENST00000592412 RBL2Q08999 1139 aa21.42■■□□□ 1.02
CIRBP-238ENST00000592412 AAK1Q2M2I8 961 aa21.42■■□□□ 1.02
CIRBP-238ENST00000592412 KIAA1217Q5T5P2 1943 aa21.42■■□□□ 1.02
CIRBP-238ENST00000592412 SEPT14Q6ZU15 432 aa21.42■■□□□ 1.02
CIRBP-238ENST00000592412 DGKHQ86XP1 1220 aa21.42■■□□□ 1.02
CIRBP-238ENST00000592412 CAGE1Q8TC20 777 aa21.42■■□□□ 1.02
CIRBP-238ENST00000592412 AFAP1L1Q8TED9 768 aa21.42■■□□□ 1.02
CIRBP-238ENST00000592412 BRWD1Q9NSI6 2320 aa21.42■■□□□ 1.02
CIRBP-238ENST00000592412 ABCB11O95342 1321 aa21.41■■□□□ 1.02
CIRBP-238ENST00000592412 TLL1O43897 1013 aa21.41■■□□□ 1.02
CIRBP-238ENST00000592412 GH1P01241 217 aa21.41■■□□□ 1.02
CIRBP-238ENST00000592412 RRP1P56182 461 aaKnown RBP21.41■■□□□ 1.02
CIRBP-238ENST00000592412 DEFB103AP81534 67 aa21.41■■□□□ 1.02
CIRBP-238ENST00000592412 HDAC1Q13547 482 aaPredicted RBP21.41■■□□□ 1.02
CIRBP-238ENST00000592412 ADGRF4Q8IZF3 695 aa21.41■■□□□ 1.02
CIRBP-238ENST00000592412 PNMA1Q8ND90 353 aa21.41■■□□□ 1.02
CIRBP-238ENST00000592412 ESR2Q92731 530 aa21.41■■□□□ 1.02
CIRBP-238ENST00000592412 CRBNQ96SW2 442 aa21.41■■□□□ 1.02
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