RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 POU3F3P20264 500 aaPredicted RBP19.21■□□□□ 0.67
NPC1-205ENST00000587163 KCNQ1P51787 676 aa19.21■□□□□ 0.67
NPC1-205ENST00000587163 HAND2P61296 217 aa19.21■□□□□ 0.67
NPC1-205ENST00000587163 PPP2R5BQ15173 497 aa19.21■□□□□ 0.67
NPC1-205ENST00000587163 ANKRD45Q5TZF3 282 aa19.21■□□□□ 0.67
NPC1-205ENST00000587163 KRT40Q6A162 431 aa19.21■□□□□ 0.67
NPC1-205ENST00000587163 SCFD2Q8WU76 684 aa19.21■□□□□ 0.67
NPC1-205ENST00000587163 PRRC2BQ5JSZ5 2229 aaKnown RBP19.2■□□□□ 0.66
NPC1-205ENST00000587163 PITPNM1O00562 1244 aa19.2■□□□□ 0.66
NPC1-205ENST00000587163 KPNA6O60684 536 aa19.2■□□□□ 0.66
NPC1-205ENST00000587163 SNHG28P0DPA3 235 aa19.2■□□□□ 0.66
NPC1-205ENST00000587163 ACTN1P12814 892 aa19.2■□□□□ 0.66
NPC1-205ENST00000587163 RFC2P35250 354 aa19.2■□□□□ 0.66
NPC1-205ENST00000587163 PDE1AP54750 535 aa19.2■□□□□ 0.66
NPC1-205ENST00000587163 TAP1Q03518 808 aa19.2■□□□□ 0.66
NPC1-205ENST00000587163 MCMDC2Q4G0Z9 681 aa19.2■□□□□ 0.66
NPC1-205ENST00000587163 BRDTQ58F21 947 aaPredicted RBP19.2■□□□□ 0.66
NPC1-205ENST00000587163 ZNF589Q86UQ0 364 aaPredicted RBP19.2■□□□□ 0.66
NPC1-205ENST00000587163 RETREG2Q8NC44 543 aa19.2■□□□□ 0.66
NPC1-205ENST00000587163 DNERQ8NFT8 737 aa19.2■□□□□ 0.66
NPC1-205ENST00000587163 SLC9A7Q96T83 725 aa19.2■□□□□ 0.66
NPC1-205ENST00000587163 CPVLQ9H3G5 476 aa19.2■□□□□ 0.66
NPC1-205ENST00000587163 RBAK-RBAKDNI3L0D1 243 aa19.19■□□□□ 0.66
NPC1-205ENST00000587163 CHMP4BP1P59074 171 aa19.19■□□□□ 0.66
NPC1-205ENST00000587163 PTPN11Q06124 597 aaPredicted RBP19.19■□□□□ 0.66
NPC1-205ENST00000587163 SKIV2LQ15477 1246 aaKnown RBP19.19■□□□□ 0.66
NPC1-205ENST00000587163 HERC6Q8IVU3 1022 aa19.19■□□□□ 0.66
NPC1-205ENST00000587163 PHOSPHO2Q8TCD6 241 aa19.19■□□□□ 0.66
NPC1-205ENST00000587163 TBC1D5Q92609 795 aa19.19■□□□□ 0.66
NPC1-205ENST00000587163 TTC14Q96N46 770 aa19.19■□□□□ 0.66
NPC1-205ENST00000587163 CTAGE1Q96RT6 745 aa19.19■□□□□ 0.66
NPC1-205ENST00000587163 FTOQ9C0B1 505 aaKnown RBP eCLIP19.19■□□□□ 0.66
NPC1-205ENST00000587163 TET1Q8NFU7 2136 aa19.19■□□□□ 0.66
NPC1-205ENST00000587163 WDR19Q8NEZ3 1342 aa19.19■□□□□ 0.66
NPC1-205ENST00000587163 RAD50Q92878 1312 aa19.19■□□□□ 0.66
NPC1-205ENST00000587163 GOLGA8HP0CJ92 632 aa19.18■□□□□ 0.66
NPC1-205ENST00000587163 NMIQ13287 307 aaPredicted RBP19.18■□□□□ 0.66
NPC1-205ENST00000587163 GPNMBQ14956 572 aa19.18■□□□□ 0.66
NPC1-205ENST00000587163 USH1GQ495M9 461 aa19.18■□□□□ 0.66
NPC1-205ENST00000587163 CCDC62Q6P9F0 684 aa19.18■□□□□ 0.66
NPC1-205ENST00000587163 SPRED2Q7Z698 418 aa19.18■□□□□ 0.66
NPC1-205ENST00000587163 ARNTL2Q8WYA1 636 aa19.18■□□□□ 0.66
NPC1-205ENST00000587163 UBA5Q9GZZ9 404 aa19.18■□□□□ 0.66
NPC1-205ENST00000587163 PNMA2Q9UL42 364 aa19.18■□□□□ 0.66
NPC1-205ENST00000587163 TANC1Q9C0D5 1861 aa19.18■□□□□ 0.66
NPC1-205ENST00000587163 BFSP2Q13515 415 aa19.17■□□□□ 0.66
NPC1-205ENST00000587163 MFSD6Q6ZSS7 791 aa19.17■□□□□ 0.66
NPC1-205ENST00000587163 TBC1D10CQ8IV04 446 aa19.17■□□□□ 0.66
NPC1-205ENST00000587163 RGS22Q8NE09 1264 aa19.17■□□□□ 0.66
NPC1-205ENST00000587163 AFG1LQ8WV93 481 aa19.17■□□□□ 0.66
NPC1-205ENST00000587163 MPHOSPH6Q99547 160 aaKnown RBP19.17■□□□□ 0.66
NPC1-205ENST00000587163 ZKSCAN3Q9BRR0 538 aa19.17■□□□□ 0.66
NPC1-205ENST00000587163 PTPRSQ13332 1948 aa19.16■□□□□ 0.66
NPC1-205ENST00000587163 TRIP12Q14669 1992 aaPredicted RBP19.16■□□□□ 0.66
NPC1-205ENST00000587163 GTPBP6O43824 516 aaPredicted RBP19.16■□□□□ 0.66
NPC1-205ENST00000587163 PTGISQ16647 500 aa19.16■□□□□ 0.66
NPC1-205ENST00000587163 LY6KQ17RY6 165 aa19.16■□□□□ 0.66
NPC1-205ENST00000587163 AAK1Q2M2I8 961 aa19.16■□□□□ 0.66
NPC1-205ENST00000587163 GDF6Q6KF10 455 aaPredicted RBP19.16■□□□□ 0.66
NPC1-205ENST00000587163 TMCO2Q7Z6W1 182 aaPredicted RBP19.16■□□□□ 0.66
NPC1-205ENST00000587163 TAAR1Q96RJ0 339 aa19.16■□□□□ 0.66
NPC1-205ENST00000587163 NOD1Q9Y239 953 aa19.16■□□□□ 0.66
NPC1-205ENST00000587163 ZMYM6O95789 1325 aa19.16■□□□□ 0.66
NPC1-205ENST00000587163 SEPT14Q6ZU15 432 aa19.15■□□□□ 0.66
NPC1-205ENST00000587163 DHX38Q92620 1227 aaKnown RBP19.15■□□□□ 0.66
NPC1-205ENST00000587163 KAT2BQ92831 832 aa19.15■□□□□ 0.66
NPC1-205ENST00000587163 COL20A1Q9P218 1284 aa19.15■□□□□ 0.66
NPC1-205ENST00000587163 ZBTB47Q9UFB7 747 aaPredicted RBP19.15■□□□□ 0.66
NPC1-205ENST00000587163 LCHNA4D1U4 455 aa19.14■□□□□ 0.65
NPC1-205ENST00000587163 B4DLN1 442 aa19.14■□□□□ 0.65
NPC1-205ENST00000587163 KIF28PB7ZC32 967 aa19.14■□□□□ 0.65
NPC1-205ENST00000587163 LPXNO60711 386 aa19.14■□□□□ 0.65
NPC1-205ENST00000587163 MMP3P08254 477 aa19.14■□□□□ 0.65
NPC1-205ENST00000587163 MRPL12P52815 198 aaKnown RBP19.14■□□□□ 0.65
NPC1-205ENST00000587163 ARHGAP1Q07960 439 aa19.14■□□□□ 0.65
NPC1-205ENST00000587163 GRB10Q13322 594 aa19.14■□□□□ 0.65
NPC1-205ENST00000587163 GPATCH4Q5T3I0 446 aaKnown RBP19.14■□□□□ 0.65
NPC1-205ENST00000587163 CHST3Q7LGC8 479 aa19.14■□□□□ 0.65
NPC1-205ENST00000587163 NEDD4P46934 1319 aa19.14■□□□□ 0.65
NPC1-205ENST00000587163 CCDC171Q6TFL3 1326 aa19.14■□□□□ 0.65
NPC1-205ENST00000587163 TLL1O43897 1013 aa19.13■□□□□ 0.65
NPC1-205ENST00000587163 BAIAP3O94812 1187 aa19.13■□□□□ 0.65
NPC1-205ENST00000587163 GH1P01241 217 aa19.13■□□□□ 0.65
NPC1-205ENST00000587163 WDR5P61964 334 aaKnown RBP19.13■□□□□ 0.65
NPC1-205ENST00000587163 CDC37Q16543 378 aaPredicted RBP19.13■□□□□ 0.65
NPC1-205ENST00000587163 TCTN1Q2MV58 587 aa19.13■□□□□ 0.65
NPC1-205ENST00000587163 SESTD1Q86VW0 696 aa19.13■□□□□ 0.65
NPC1-205ENST00000587163 DGKHQ86XP1 1220 aa19.13■□□□□ 0.65
NPC1-205ENST00000587163 SYTL5Q8TDW5 730 aaPredicted RBP19.13■□□□□ 0.65
NPC1-205ENST00000587163 PCP11498 1178 aaKnown RBP19.12■□□□□ 0.65
NPC1-205ENST00000587163 TICAM2Q86XR7 235 aa19.12■□□□□ 0.65
NPC1-205ENST00000587163 ADGRF4Q8IZF3 695 aa19.12■□□□□ 0.65
NPC1-205ENST00000587163 CAGE1Q8TC20 777 aa19.12■□□□□ 0.65
NPC1-205ENST00000587163 NSUN6Q8TEA1 469 aaKnown RBP19.12■□□□□ 0.65
NPC1-205ENST00000587163 AFAP1L1Q8TED9 768 aa19.12■□□□□ 0.65
NPC1-205ENST00000587163 ESR2Q92731 530 aa19.12■□□□□ 0.65
NPC1-205ENST00000587163 COG5Q9UP83 839 aa19.12■□□□□ 0.65
NPC1-205ENST00000587163 ABCB11O95342 1321 aa19.11■□□□□ 0.65
NPC1-205ENST00000587163 TRIM6-TRIM34B2RNG4 842 aa19.11■□□□□ 0.65
NPC1-205ENST00000587163 NBNO60934 754 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms