RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 A6NJR5 290 aa19.02■□□□□ 0.64
SREBF1-221ENST00000583080 IQCF3P0C7M6 154 aa19.02■□□□□ 0.64
SREBF1-221ENST00000583080 ACTN1P12814 892 aa19.02■□□□□ 0.64
SREBF1-221ENST00000583080 TAP1Q03518 808 aa19.02■□□□□ 0.64
SREBF1-221ENST00000583080 ZNF543Q08ER8 600 aa19.02■□□□□ 0.64
SREBF1-221ENST00000583080 NFRKBQ6P4R8 1299 aa19.02■□□□□ 0.64
SREBF1-221ENST00000583080 SCFD2Q8WU76 684 aa19.02■□□□□ 0.64
SREBF1-221ENST00000583080 RAD50Q92878 1312 aa19.01■□□□□ 0.63
SREBF1-221ENST00000583080 PITPNM1O00562 1244 aa19.01■□□□□ 0.63
SREBF1-221ENST00000583080 NKRFO15226 690 aaKnown RBP eCLIP19.01■□□□□ 0.63
SREBF1-221ENST00000583080 FGAP02671 866 aa19.01■□□□□ 0.63
SREBF1-221ENST00000583080 POU3F3P20264 500 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-221ENST00000583080 RFC2P35250 354 aa19.01■□□□□ 0.63
SREBF1-221ENST00000583080 HAND2P61296 217 aa19.01■□□□□ 0.63
SREBF1-221ENST00000583080 ZNF589Q86UQ0 364 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-221ENST00000583080 HERC6Q8IVU3 1022 aa19.01■□□□□ 0.63
SREBF1-221ENST00000583080 ARNTL2Q8WYA1 636 aa19.01■□□□□ 0.63
SREBF1-221ENST00000583080 EVI5LQ96CN4 794 aa19.01■□□□□ 0.63
SREBF1-221ENST00000583080 CPVLQ9H3G5 476 aa19.01■□□□□ 0.63
SREBF1-221ENST00000583080 HELLSQ9NRZ9 838 aa19.01■□□□□ 0.63
SREBF1-221ENST00000583080 TCP11L1Q9NUJ3 509 aa19.01■□□□□ 0.63
SREBF1-221ENST00000583080 WDR19Q8NEZ3 1342 aa19■□□□□ 0.63
SREBF1-221ENST00000583080 GTPBP6O43824 516 aaPredicted RBP19■□□□□ 0.63
SREBF1-221ENST00000583080 TXNP10599 105 aaKnown RBP19■□□□□ 0.63
SREBF1-221ENST00000583080 CHMP4BP1P59074 171 aa19■□□□□ 0.63
SREBF1-221ENST00000583080 USH1GQ495M9 461 aa19■□□□□ 0.63
SREBF1-221ENST00000583080 BRDTQ58F21 947 aaPredicted RBP19■□□□□ 0.63
SREBF1-221ENST00000583080 TBC1D10CQ8IV04 446 aa19■□□□□ 0.63
SREBF1-221ENST00000583080 RETREG2Q8NC44 543 aa19■□□□□ 0.63
SREBF1-221ENST00000583080 CTAGE1Q96RT6 745 aa19■□□□□ 0.63
SREBF1-221ENST00000583080 FTOQ9C0B1 505 aaKnown RBP eCLIP19■□□□□ 0.63
SREBF1-221ENST00000583080 SNHG28P0DPA3 235 aa18.99■□□□□ 0.63
SREBF1-221ENST00000583080 TMCO2Q7Z6W1 182 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-221ENST00000583080 DNERQ8NFT8 737 aa18.99■□□□□ 0.63
SREBF1-221ENST00000583080 PHOSPHO2Q8TCD6 241 aa18.99■□□□□ 0.63
SREBF1-221ENST00000583080 NOD1Q9Y239 953 aa18.99■□□□□ 0.63
SREBF1-221ENST00000583080 LCHNA4D1U4 455 aa18.98■□□□□ 0.63
SREBF1-221ENST00000583080 KPNA6O60684 536 aa18.98■□□□□ 0.63
SREBF1-221ENST00000583080 GOLGA8HP0CJ92 632 aa18.98■□□□□ 0.63
SREBF1-221ENST00000583080 HSPD1P10809 573 aaKnown RBP18.98■□□□□ 0.63
SREBF1-221ENST00000583080 PTPN11Q06124 597 aaPredicted RBP18.98■□□□□ 0.63
SREBF1-221ENST00000583080 BFSP2Q13515 415 aa18.98■□□□□ 0.63
SREBF1-221ENST00000583080 AAK1Q2M2I8 961 aa18.98■□□□□ 0.63
SREBF1-221ENST00000583080 AFG1LQ8WV93 481 aa18.98■□□□□ 0.63
SREBF1-221ENST00000583080 MPHOSPH6Q99547 160 aaKnown RBP18.98■□□□□ 0.63
SREBF1-221ENST00000583080 TRIP12Q14669 1992 aaPredicted RBP18.98■□□□□ 0.63
SREBF1-221ENST00000583080 ZMYM6O95789 1325 aa18.98■□□□□ 0.63
SREBF1-221ENST00000583080 NEDD4P46934 1319 aa18.98■□□□□ 0.63
SREBF1-221ENST00000583080 LPXNO60711 386 aa18.97■□□□□ 0.63
SREBF1-221ENST00000583080 MMP3P08254 477 aa18.97■□□□□ 0.63
SREBF1-221ENST00000583080 PLA2G5P39877 138 aa18.97■□□□□ 0.63
SREBF1-221ENST00000583080 NMIQ13287 307 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-221ENST00000583080 GRB10Q13322 594 aa18.97■□□□□ 0.63
SREBF1-221ENST00000583080 GPNMBQ14956 572 aa18.97■□□□□ 0.63
SREBF1-221ENST00000583080 PTGISQ16647 500 aa18.97■□□□□ 0.63
SREBF1-221ENST00000583080 MCMDC2Q4G0Z9 681 aa18.97■□□□□ 0.63
SREBF1-221ENST00000583080 CCDC62Q6P9F0 684 aa18.97■□□□□ 0.63
SREBF1-221ENST00000583080 DHX38Q92620 1227 aaKnown RBP18.97■□□□□ 0.63
SREBF1-221ENST00000583080 COL20A1Q9P218 1284 aa18.97■□□□□ 0.63
SREBF1-221ENST00000583080 PNMA2Q9UL42 364 aa18.97■□□□□ 0.63
SREBF1-221ENST00000583080 BAIAP3O94812 1187 aa18.96■□□□□ 0.63
SREBF1-221ENST00000583080 PDE1AP54750 535 aa18.96■□□□□ 0.63
SREBF1-221ENST00000583080 WDR5P61964 334 aaKnown RBP18.96■□□□□ 0.63
SREBF1-221ENST00000583080 ARHGAP1Q07960 439 aa18.96■□□□□ 0.63
SREBF1-221ENST00000583080 LY6KQ17RY6 165 aa18.96■□□□□ 0.63
SREBF1-221ENST00000583080 TCTN1Q2MV58 587 aa18.96■□□□□ 0.63
SREBF1-221ENST00000583080 ANKRD45Q5TZF3 282 aa18.96■□□□□ 0.63
SREBF1-221ENST00000583080 GDF6Q6KF10 455 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-221ENST00000583080 TBC1D5Q92609 795 aa18.96■□□□□ 0.63
SREBF1-221ENST00000583080 KAT2BQ92831 832 aa18.96■□□□□ 0.63
SREBF1-221ENST00000583080 ZKSCAN3Q9BRR0 538 aa18.96■□□□□ 0.63
SREBF1-221ENST00000583080 UBA5Q9GZZ9 404 aa18.96■□□□□ 0.63
SREBF1-221ENST00000583080 TLL1O43897 1013 aa18.95■□□□□ 0.62
SREBF1-221ENST00000583080 DEFB103AP81534 67 aa18.95■□□□□ 0.62
SREBF1-221ENST00000583080 CDC37Q16543 378 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-221ENST00000583080 MFSD6Q6ZSS7 791 aa18.95■□□□□ 0.62
SREBF1-221ENST00000583080 SEPT14Q6ZU15 432 aa18.95■□□□□ 0.62
SREBF1-221ENST00000583080 AFAP1L1Q8TED9 768 aa18.95■□□□□ 0.62
SREBF1-221ENST00000583080 GDPD5Q8WTR4 605 aa18.95■□□□□ 0.62
SREBF1-221ENST00000583080 CCDC171Q6TFL3 1326 aa18.95■□□□□ 0.62
SREBF1-221ENST00000583080 KIF28PB7ZC32 967 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 GH1P01241 217 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 KCNJ6P48051 423 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 CHST3Q7LGC8 479 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 SESTD1Q86VW0 696 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 CAGE1Q8TC20 777 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 SYTL5Q8TDW5 730 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-221ENST00000583080 TTC14Q96N46 770 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 TAAR1Q96RJ0 339 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 C1QTNF1Q9BXJ1 281 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 EPHX3Q9H6B9 360 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 COG5Q9UP83 839 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 LAMA4Q16363 1823 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 KIAA1217Q5T5P2 1943 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 BRWD1Q9NSI6 2320 aa18.94■□□□□ 0.62
SREBF1-221ENST00000583080 B4DLN1 442 aa18.93■□□□□ 0.62
SREBF1-221ENST00000583080 NBNO60934 754 aa18.93■□□□□ 0.62
SREBF1-221ENST00000583080 SELPP16109 830 aa18.93■□□□□ 0.62
SREBF1-221ENST00000583080 MRPL12P52815 198 aaKnown RBP18.93■□□□□ 0.62
SREBF1-221ENST00000583080 GPATCH4Q5T3I0 446 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms