RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 IFIT3O14879 490 aaKnown RBP11.34□□□□□ -0.59
TOP3A-211ENST00000581536 PARP1P09874 1014 aaKnown RBP11.34□□□□□ -0.59
TOP3A-211ENST00000581536 RARBP10826 455 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 AKR1A1P14550 325 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 TRDNQ13061 729 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 NECTIN1Q15223 517 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 SLC35G1Q2M3R5 365 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 GPATCH4Q5T3I0 446 aaKnown RBP11.34□□□□□ -0.59
TOP3A-211ENST00000581536 KIAA1211Q6ZU35 1233 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 MSL3Q8N5Y2 521 aaKnown RBP11.34□□□□□ -0.59
TOP3A-211ENST00000581536 NCOA7Q8NI08 942 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 ABHD16BQ9H3Z7 469 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 JMJD4Q9H9V9 463 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 XPNPEP3Q9NQH7 507 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 NRBP1Q9UHY1 535 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 MAD2L2Q9UI95 211 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 FAM184BQ9ULE4 1060 aa11.34□□□□□ -0.59
TOP3A-211ENST00000581536 PTPDC1A2A3K4 754 aa11.33□□□□□ -0.6
TOP3A-211ENST00000581536 PALM3A6NDB9 673 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-211ENST00000581536 KBTBD13C9JR72 458 aa11.33□□□□□ -0.6
TOP3A-211ENST00000581536 SLC27A2O14975 620 aa11.33□□□□□ -0.6
TOP3A-211ENST00000581536 ADAMTS4O75173 837 aa11.33□□□□□ -0.6
TOP3A-211ENST00000581536 CALML3P27482 149 aa11.33□□□□□ -0.6
TOP3A-211ENST00000581536 BMP2KLQ5H9B9 411 aa11.33□□□□□ -0.6
TOP3A-211ENST00000581536 TAPT1Q6NXT6 567 aa11.33□□□□□ -0.6
TOP3A-211ENST00000581536 SLC30A10Q6XR72 485 aa11.33□□□□□ -0.6
TOP3A-211ENST00000581536 NUDT18Q6ZVK8 323 aa11.33□□□□□ -0.6
TOP3A-211ENST00000581536 MB21D2Q8IYB1 491 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-211ENST00000581536 PRO3102Q9H379 93 aa11.33□□□□□ -0.6
TOP3A-211ENST00000581536 ANO2Q9NQ90 1003 aa11.33□□□□□ -0.6
TOP3A-211ENST00000581536 KLRF2D3W0D1 207 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 OATP04181 439 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 FECHP22830 423 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 NT5C2P49902 561 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 RTP1P59025 263 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 RPS6P62753 249 aaKnown RBP11.32□□□□□ -0.6
TOP3A-211ENST00000581536 WTAPQ15007 396 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 KCNA10Q16322 511 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 CDC37Q16543 378 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-211ENST00000581536 QRICH1Q2TAL8 776 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 ASPRV1Q53RT3 343 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 TMEM67Q5HYA8 995 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 CREB3L3Q68CJ9 461 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 RNF207Q6ZRF8 634 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 KLHDC9Q8NEP7 349 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 LRRC2Q9BYS8 371 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 ATP11BQ9Y2G3 1177 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 ADGRG1Q9Y653 693 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 KIAA1217Q5T5P2 1943 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 TRIOBPQ9H2D6 2365 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 SYNRGQ9UMZ2 1314 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 LRRC37A2A6NM11 1700 aa11.32□□□□□ -0.6
TOP3A-211ENST00000581536 ASB14A6NK59 587 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 GOLGA8CPA6NN73 597 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 CTAGE5O15320 804 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 DHX16O60231 1041 aaKnown RBP11.31□□□□□ -0.6
TOP3A-211ENST00000581536 PPP1R11O60927 126 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-211ENST00000581536 DUSP11O75319 330 aaKnown RBP11.31□□□□□ -0.6
TOP3A-211ENST00000581536 ZMYND10O75800 440 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 SMPD1P17405 629 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 ALDH5A1P51649 535 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-211ENST00000581536 MDM2Q00987 491 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-211ENST00000581536 BEX3Q00994 111 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 TNFAIP2Q03169 654 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 MMRN1Q13201 1228 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 GRM4Q14833 912 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 CCSAPQ6IQ19 270 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-211ENST00000581536 SH3RF1Q7Z6J0 888 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 RALYLQ86SE5 291 aaKnown RBP11.31□□□□□ -0.6
TOP3A-211ENST00000581536 RNF180Q86T96 592 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 FBXO16Q8IX29 292 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-211ENST00000581536 TAAR1Q96RJ0 339 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 GDF15Q99988 308 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 MYL10Q9BUA6 226 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 LY9Q9HBG7 655 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 COL20A1Q9P218 1284 aa11.31□□□□□ -0.6
TOP3A-211ENST00000581536 SEPT9Q9UHD8 586 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-211ENST00000581536 A0A1W2PQ45 241 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-211ENST00000581536 A0A1W2PQY0 241 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 DYNC1LI2O43237 492 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-211ENST00000581536 PRC1O43663 620 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 CYTH3O43739 400 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 C6orf222P0C671 652 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-211ENST00000581536 MAGEA10P43363 369 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-211ENST00000581536 FXR1P51114 621 aaKnown RBP eCLIP11.3□□□□□ -0.6
TOP3A-211ENST00000581536 ACLYP53396 1101 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 GJA9P57773 515 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 TROAPQ12815 778 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 TRIM60Q495X7 471 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 GNASQ5JWF2 1037 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
TOP3A-211ENST00000581536 RAB11FIP4Q86YS3 637 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 MORC4Q8TE76 937 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 PIBF1Q8WXW3 757 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 MTMR8Q96EF0 704 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 PIGSQ96S52 555 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 PHF24Q9UPV7 400 aa11.3□□□□□ -0.6
TOP3A-211ENST00000581536 GNEQ9Y223 722 aaKnown RBP11.3□□□□□ -0.6
TOP3A-211ENST00000581536 WDR19Q8NEZ3 1342 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms