RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 HIC1Q14526 733 aa13.33□□□□□ -0.28
SUPT4H1-203ENST00000579289 CNKSR3Q6P9H4 555 aa13.33□□□□□ -0.28
SUPT4H1-203ENST00000579289 AFAP1L1Q8TED9 768 aa13.33□□□□□ -0.28
SUPT4H1-203ENST00000579289 OSBP2Q969R2 916 aa13.33□□□□□ -0.28
SUPT4H1-203ENST00000579289 MRPL38Q96DV4 380 aaKnown RBP13.33□□□□□ -0.28
SUPT4H1-203ENST00000579289 FTOQ9C0B1 505 aaKnown RBP eCLIP13.33□□□□□ -0.28
SUPT4H1-203ENST00000579289 PRR12Q9ULL5 1215 aa13.33□□□□□ -0.28
SUPT4H1-203ENST00000579289 NFIBO00712 420 aa13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 SSTR3P32745 418 aaPredicted RBP13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 STAT2P52630 851 aa13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 BFSP2Q13515 415 aa13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 BAATQ14032 418 aaPredicted RBP13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 CTC1Q2NKJ3 1217 aa13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 HERC4Q5GLZ8 1057 aaPredicted RBP13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 CCDC62Q6P9F0 684 aa13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.32□□□□□ -0.282e-6■□□□□ 8.8
SUPT4H1-203ENST00000579289 RETREG2Q8NC44 543 aa13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 CAGE1Q8TC20 777 aa13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 CLEC4DQ8WXI8 215 aa13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 PABPC5Q96DU9 382 aaKnown RBP13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 RANBP17Q9H2T7 1088 aaKnown RBP13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 IL17RBQ9NRM6 502 aa13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 PRKAG3Q9UGI9 489 aa13.32□□□□□ -0.28
SUPT4H1-203ENST00000579289 LOC102724159A0A0B4J2E5 919 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 ABHD14A-ACY1A0A1B0GW23 586 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 LGR5O75473 907 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 CKBP12277 381 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 SELPP16109 830 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 MCCP23508 829 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 DLX2Q07687 328 aaPredicted RBP13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 PWP2Q15269 919 aaKnown RBP13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 PTGISQ16647 500 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 PUS10Q3MIT2 529 aaKnown RBP13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 KCTD1Q719H9 257 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 BMP8AQ7Z5Y6 402 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 FAM160B2Q86V87 743 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 ADHFE1Q8IWW8 467 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 OR6J1Q8NGC5 347 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 KIF1BPQ96EK5 621 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 OSBPL7Q9BZF2 842 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 MKNK2Q9HBH9 465 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 KMT2EQ8IZD2 1858 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 DNAH14Q0VDD8 3507 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 MYO7AQ13402 2215 aa13.31□□□□□ -0.28
SUPT4H1-203ENST00000579289 MINDY4BA8MYZ0 360 aa13.3□□□□□ -0.28
SUPT4H1-203ENST00000579289 FOXP2O15409 715 aa13.3□□□□□ -0.28
SUPT4H1-203ENST00000579289 ICAM1P05362 532 aa13.3□□□□□ -0.28
SUPT4H1-203ENST00000579289 TCEAL5Q5H9L2 206 aa13.3□□□□□ -0.28
SUPT4H1-203ENST00000579289 FAM47CQ5HY64 1035 aa13.3□□□□□ -0.28
SUPT4H1-203ENST00000579289 RCSD1Q6JBY9 416 aa13.3□□□□□ -0.28
SUPT4H1-203ENST00000579289 LRRC8DQ7L1W4 858 aa13.3□□□□□ -0.28
SUPT4H1-203ENST00000579289 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
SUPT4H1-203ENST00000579289 CLASRPQ8N2M8 674 aaKnown RBP13.3□□□□□ -0.28
SUPT4H1-203ENST00000579289 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
SUPT4H1-203ENST00000579289 ZFHX2Q9C0A1 2572 aaPredicted RBP13.3□□□□□ -0.28
SUPT4H1-203ENST00000579289 SPTBN4Q9H254 2564 aa13.3□□□□□ -0.28
SUPT4H1-203ENST00000579289 MICAL3Q7RTP6 2002 aa13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 H3BNC9 293 aa13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 KCNJ6P48051 423 aa13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 SMAD2Q15796 467 aaKnown RBP13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 EPC2Q52LR7 807 aa13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 TTBK2Q6IQ55 1244 aa13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 BTNL9Q6UXG8 535 aa13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 NSMFQ6X4W1 530 aa13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 SLC30A10Q6XR72 485 aa13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 ITPRIPQ8IWB1 547 aa13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 MUTYHQ9UIF7 546 aa13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 CTDP1Q9Y5B0 961 aaPredicted RBP13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 PLXNA3P51805 1871 aa13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 CACNA1HO95180 2353 aa13.29□□□□□ -0.28
SUPT4H1-203ENST00000579289 HAS3O00219 553 aa13.28□□□□□ -0.28
SUPT4H1-203ENST00000579289 NKRFO15226 690 aaKnown RBP eCLIP13.28□□□□□ -0.28
SUPT4H1-203ENST00000579289 ST18O60284 1047 aa13.28□□□□□ -0.28
SUPT4H1-203ENST00000579289 KPNA6O60684 536 aa13.28□□□□□ -0.28
SUPT4H1-203ENST00000579289 IFIT2P09913 472 aaKnown RBP13.28□□□□□ -0.28
SUPT4H1-203ENST00000579289 ARHGAP1Q07960 439 aa13.28□□□□□ -0.28
SUPT4H1-203ENST00000579289 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
SUPT4H1-203ENST00000579289 HSP90AB4PQ58FF6 505 aa13.28□□□□□ -0.28
SUPT4H1-203ENST00000579289 FBXO22Q8NEZ5 403 aa13.28□□□□□ -0.28
SUPT4H1-203ENST00000579289 CHMP4CQ96CF2 233 aa13.28□□□□□ -0.28
SUPT4H1-203ENST00000579289 INCENPQ9NQS7 918 aa13.28□□□□□ -0.28
SUPT4H1-203ENST00000579289 GTF2IRD1Q9UHL9 959 aa13.28□□□□□ -0.28
SUPT4H1-203ENST00000579289 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.28□□□□□ -0.28
SUPT4H1-203ENST00000579289 M0R2C6 588 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 MBTPS2O43462 519 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 NMT2O60551 498 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 MMP3P08254 477 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 SLC1A4P43007 532 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 TFAP4Q01664 338 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 ZNF618Q5T7W0 954 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 FAM117BQ6P1L5 589 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 RNF135Q8IUD6 432 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 FTSJ3Q8IY81 847 aaKnown RBP13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 IFNL3Q8IZI9 196 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 ZNF444Q8N0Y2 327 aaPredicted RBP13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 BANK1Q8NDB2 785 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 EDAQ92838 391 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 ZBED2Q9BTP6 218 aa13.27□□□□□ -0.29
SUPT4H1-203ENST00000579289 CCPG1Q9ULG6 757 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms