RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 RAD50Q92878 1312 aa10.33□□□□□ -0.76
BRIP1-204ENST00000579028 TRIP12Q14669 1992 aaPredicted RBP10.32□□□□□ -0.76
BRIP1-204ENST00000579028 A6NJR5 290 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 CCER2I3L3R5 266 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 GPAA1O43292 621 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 GALR2O43603 387 aaPredicted RBP10.32□□□□□ -0.76
BRIP1-204ENST00000579028 GJB5O95377 273 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 PARNO95453 639 aaKnown RBP10.32□□□□□ -0.76
BRIP1-204ENST00000579028 ICAM1P05362 532 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 IL9P15248 144 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 KCNA5P22460 613 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 SNAP25P60880 206 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 DEFB103AP81534 67 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 RBL2Q08999 1139 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 BAATQ14032 418 aaPredicted RBP10.32□□□□□ -0.76
BRIP1-204ENST00000579028 PPP4R3BQ5MIZ7 849 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 KCTD1Q719H9 257 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 CCDC155Q8N6L0 562 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 KBTBD3Q8NAB2 608 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 PANK1Q8TE04 598 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 PPP1R13LQ8WUF5 828 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 PHF12Q96QT6 1004 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 RAD9AQ99638 391 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 ZBED2Q9BTP6 218 aa10.32□□□□□ -0.76
BRIP1-204ENST00000579028 ABHD14A-ACY1A0A1B0GW23 586 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 POTEB3A0JP26 581 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 LINC01553A4QN01 128 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 GRXCR2A6NFK2 248 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 CXCL10P02778 98 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 SELPP16109 830 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 SSTR3P32745 418 aaPredicted RBP10.31□□□□□ -0.76
BRIP1-204ENST00000579028 TFAP4Q01664 338 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 PDE4BQ07343 736 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 PPP2R5BQ15173 497 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 PUS10Q3MIT2 529 aaKnown RBP10.31□□□□□ -0.76
BRIP1-204ENST00000579028 PTCRAQ6ISU1 281 aaPredicted RBP10.31□□□□□ -0.76
BRIP1-204ENST00000579028 CNKSR3Q6P9H4 555 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 POTEBQ6S5H4 581 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 TMCO2Q7Z6W1 182 aaPredicted RBP10.31□□□□□ -0.76
BRIP1-204ENST00000579028 SESTD1Q86VW0 696 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 IFNL3Q8IZI9 196 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 FBXL18Q96ME1 805 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 UIMC1Q96RL1 719 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 CTAGE1Q96RT6 745 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 RANBP17Q9H2T7 1088 aaKnown RBP10.31□□□□□ -0.76
BRIP1-204ENST00000579028 NOD1Q9Y239 953 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 MUC6Q6W4X9 2439 aa10.31□□□□□ -0.76
BRIP1-204ENST00000579028 TRANK1O15050 2925 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 PATL2C9JE40 543 aaKnown RBP10.3□□□□□ -0.76
BRIP1-204ENST00000579028 NFIBO00712 420 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 RNF113AO15541 343 aaKnown RBP10.3□□□□□ -0.76
BRIP1-204ENST00000579028 DCXO43602 365 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 EFCAB14O75071 495 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 ZFYP08048 801 aaPredicted RBP10.3□□□□□ -0.76
BRIP1-204ENST00000579028 EDNRBP24530 442 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 PTGISQ16647 500 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 CSPP1Q1MSJ5 1256 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 BTNL9Q6UXG8 535 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 LRRC8DQ7L1W4 858 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 NEK9Q8TD19 979 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 SCFD2Q8WU76 684 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 COPS5Q92905 334 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 SNX27Q96L92 541 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 ZBTB40Q9NUA8 1239 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 MTUS1Q9ULD2 1270 aa10.3□□□□□ -0.76
BRIP1-204ENST00000579028 BRWD1Q9NSI6 2320 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 PTPDC1A2A3K4 754 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 M0R2C6 588 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 NBNO60934 754 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 APPP05067 770 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 SLC3A2P08195 630 aaKnown RBP10.29□□□□□ -0.76
BRIP1-204ENST00000579028 NOVP48745 357 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 PPARAQ07869 468 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 PDE4DQ08499 809 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 TCTN1Q2MV58 587 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 GDF6Q6KF10 455 aaPredicted RBP10.29□□□□□ -0.76
BRIP1-204ENST00000579028 SLC30A10Q6XR72 485 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 RASGRP2Q7LDG7 609 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 DNERQ8NFT8 737 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 CLEC4DQ8WXI8 215 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 DHX38Q92620 1227 aaKnown RBP10.29□□□□□ -0.76
BRIP1-204ENST00000579028 CHMP4CQ96CF2 233 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 NACAP1Q9BZK3 213 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 LRRCC1Q9C099 1032 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 IL17RBQ9NRM6 502 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 ECHDC1Q9NTX5 307 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 STX8Q9UNK0 236 aa10.29□□□□□ -0.76
BRIP1-204ENST00000579028 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.29□□□□□ -0.76
BRIP1-204ENST00000579028 TXNP10599 105 aaKnown RBP10.28□□□□□ -0.76
BRIP1-204ENST00000579028 MS4A1P11836 297 aa10.28□□□□□ -0.76
BRIP1-204ENST00000579028 CKBP12277 381 aa10.28□□□□□ -0.76
BRIP1-204ENST00000579028 IKBKEQ14164 716 aa10.28□□□□□ -0.76
BRIP1-204ENST00000579028 COL19A1Q14993 1142 aa10.28□□□□□ -0.76
BRIP1-204ENST00000579028 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
BRIP1-204ENST00000579028 DCAF4Q8WV16 495 aa10.28□□□□□ -0.76
BRIP1-204ENST00000579028 MRPL38Q96DV4 380 aaKnown RBP10.28□□□□□ -0.76
BRIP1-204ENST00000579028 MPHOSPH6Q99547 160 aaKnown RBP10.28□□□□□ -0.76
BRIP1-204ENST00000579028 NAPBQ9H115 298 aa10.28□□□□□ -0.76
BRIP1-204ENST00000579028 PRKAG3Q9UGI9 489 aa10.28□□□□□ -0.76
BRIP1-204ENST00000579028 CTNNA3Q9UI47 895 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms