RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 hCG_1642624A0A1W2PR95 340 aa14.2□□□□□ -0.14
RARA-208ENST00000577646 SPDYE3A6NKU9 549 aa14.2□□□□□ -0.14
RARA-208ENST00000577646 MEIS2O14770 477 aa14.2□□□□□ -0.14
RARA-208ENST00000577646 CTDNEP1O95476 244 aa14.2□□□□□ -0.14
RARA-208ENST00000577646 CACNB2Q08289 660 aaPredicted RBP14.2□□□□□ -0.14
RARA-208ENST00000577646 STXBP2Q15833 593 aa14.2□□□□□ -0.14
RARA-208ENST00000577646 CCL14Q16627 93 aa14.2□□□□□ -0.14
RARA-208ENST00000577646 ARHGEF16Q5VV41 709 aa14.2□□□□□ -0.14
RARA-208ENST00000577646 SLC30A10Q6XR72 485 aa14.2□□□□□ -0.14
RARA-208ENST00000577646 NOL8Q76FK4 1167 aaKnown RBP14.2□□□□□ -0.14
RARA-208ENST00000577646 TBC1D5Q92609 795 aa14.2□□□□□ -0.14
RARA-208ENST00000577646 GPKOWQ92917 476 aaPredicted RBP eCLIP14.2□□□□□ -0.14
RARA-208ENST00000577646 TMX3Q96JJ7 454 aa14.2□□□□□ -0.14
RARA-208ENST00000577646 FGD4Q96M96 766 aa14.2□□□□□ -0.14
RARA-208ENST00000577646 FLRT1Q9NZU1 646 aa14.2□□□□□ -0.14
RARA-208ENST00000577646 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.2□□□□□ -0.14
RARA-208ENST00000577646 FRMPD4Q14CM0 1322 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 PLXNA1Q9UIW2 1896 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 SEPT4O43236 478 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 EIF3JO75822 258 aaKnown RBP14.19□□□□□ -0.14
RARA-208ENST00000577646 LARGE1O95461 756 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 SNAI1O95863 264 aaPredicted RBP14.19□□□□□ -0.14
RARA-208ENST00000577646 GJB1P08034 283 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 CCL5P13501 91 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
RARA-208ENST00000577646 PDE4DQ08499 809 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 IQSEC1Q6DN90 963 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 KCNV1Q6PIU1 500 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 ARMCX2Q7L311 632 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 VSIG10LQ86VR7 867 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 DAGLBQ8NCG7 672 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 TAAR1Q96RJ0 339 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 RNF208Q9H0X6 261 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 PXMP2Q9NR77 195 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.19□□□□□ -0.14
RARA-208ENST00000577646 RBBP6Q7Z6E9 1792 aaKnown RBP14.19□□□□□ -0.14
RARA-208ENST00000577646 SMCHD1A6NHR9 2005 aa14.19□□□□□ -0.14
RARA-208ENST00000577646 MAFGO15525 162 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 NR3C2P08235 984 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 TGFB3P10600 412 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 CYBAP13498 195 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 CYP2C19P33261 490 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 CLK2P49760 499 aaKnown RBP14.18□□□□□ -0.14
RARA-208ENST00000577646 NLRP5P59047 1200 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 ACVR2BQ13705 512 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 TRIM29Q14134 588 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 MTFR1Q15390 333 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 CCDC83Q8IWF9 413 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 REXO1Q8N1G1 1221 aaKnown RBP14.18□□□□□ -0.14
RARA-208ENST00000577646 INTS4Q96HW7 963 aaKnown RBP14.18□□□□□ -0.14
RARA-208ENST00000577646 PDCD2LQ9BRP1 358 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 ALG1Q9BT22 464 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 PAK6Q9NQU5 681 aaPredicted RBP14.18□□□□□ -0.14
RARA-208ENST00000577646 FAM184BQ9ULE4 1060 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 BRCA2P51587 3418 aa14.18□□□□□ -0.14
RARA-208ENST00000577646 RBM47A0AV96 593 aaKnown RBP14.17□□□□□ -0.14
RARA-208ENST00000577646 NKRFO15226 690 aaKnown RBP eCLIP14.17□□□□□ -0.143e-6■■□□□ 12
RARA-208ENST00000577646 PDIA4P13667 645 aaKnown RBP14.17□□□□□ -0.14
RARA-208ENST00000577646 FDPSP14324 419 aaKnown RBP14.17□□□□□ -0.14
RARA-208ENST00000577646 AKR1A1P14550 325 aa14.17□□□□□ -0.14
RARA-208ENST00000577646 TAL1P17542 331 aaPredicted RBP14.17□□□□□ -0.14
RARA-208ENST00000577646 CCND2P30279 289 aa14.17□□□□□ -0.14
RARA-208ENST00000577646 HOXA13P31271 388 aaPredicted RBP14.17□□□□□ -0.14
RARA-208ENST00000577646 CUL4AQ13619 759 aa14.17□□□□□ -0.14
RARA-208ENST00000577646 PCNX4Q63HM2 1172 aa14.17□□□□□ -0.14
RARA-208ENST00000577646 TYW1BQ6NUM6 668 aa14.17□□□□□ -0.14
RARA-208ENST00000577646 USP17L6PQ6QN14 398 aa14.17□□□□□ -0.14
RARA-208ENST00000577646 FAM184AQ8NB25 1140 aa14.17□□□□□ -0.14
RARA-208ENST00000577646 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.17□□□□□ -0.14
RARA-208ENST00000577646 BRMS1Q9HCU9 246 aa14.17□□□□□ -0.14
RARA-208ENST00000577646 COL20A1Q9P218 1284 aa14.17□□□□□ -0.14
RARA-208ENST00000577646 PCDHA4Q9UN74 947 aa14.17□□□□□ -0.14
RARA-208ENST00000577646 Q9Y3F1 56 aa14.17□□□□□ -0.14
RARA-208ENST00000577646 K7ELQ4 463 aaPredicted RBP14.16□□□□□ -0.14
RARA-208ENST00000577646 ZNF865P0CJ78 1059 aaPredicted RBP14.16□□□□□ -0.14
RARA-208ENST00000577646 PGM5Q15124 567 aa14.16□□□□□ -0.14
RARA-208ENST00000577646 GNPTABQ3T906 1256 aa14.16□□□□□ -0.14
RARA-208ENST00000577646 FCHSD1Q86WN1 690 aa14.16□□□□□ -0.14
RARA-208ENST00000577646 BLIDQ8IZY5 108 aa14.16□□□□□ -0.14
RARA-208ENST00000577646 ANKLE1Q8NAG6 615 aa14.16□□□□□ -0.14
RARA-208ENST00000577646 SCFD2Q8WU76 684 aa14.16□□□□□ -0.14
RARA-208ENST00000577646 CDHR1Q96JP9 859 aa14.16□□□□□ -0.14
RARA-208ENST00000577646 PHF20Q9BVI0 1012 aa14.16□□□□□ -0.14
RARA-208ENST00000577646 KATNBL1Q9H079 304 aa14.16□□□□□ -0.14
RARA-208ENST00000577646 VPS54Q9P1Q0 977 aa14.16□□□□□ -0.14
RARA-208ENST00000577646 PCDHA6Q9UN73 950 aa14.16□□□□□ -0.14
RARA-208ENST00000577646 PCDHA8Q9Y5H6 950 aa14.16□□□□□ -0.14
RARA-208ENST00000577646 ASTN1O14525 1302 aa14.15□□□□□ -0.14
RARA-208ENST00000577646 DUSP11O75319 330 aaKnown RBP14.15□□□□□ -0.14
RARA-208ENST00000577646 CD2BP2O95400 341 aaKnown RBP14.15□□□□□ -0.14
RARA-208ENST00000577646 SGPL1O95470 568 aa14.15□□□□□ -0.14
RARA-208ENST00000577646 GJA8P48165 433 aa14.15□□□□□ -0.14
RARA-208ENST00000577646 USP11P51784 963 aa14.15□□□□□ -0.14
RARA-208ENST00000577646 ST3GAL1Q11201 340 aa14.15□□□□□ -0.14
RARA-208ENST00000577646 SAFBQ15424 915 aaKnown RBP eCLIP14.15□□□□□ -0.14
RARA-208ENST00000577646 HSCBQ8IWL3 235 aa14.15□□□□□ -0.14
RARA-208ENST00000577646 ARRDC4Q8NCT1 418 aa14.15□□□□□ -0.14
RARA-208ENST00000577646 UNC93B1Q9H1C4 597 aa14.15□□□□□ -0.14
RARA-208ENST00000577646 DDX20Q9UHI6 824 aaKnown RBP14.15□□□□□ -0.14
RARA-208ENST00000577646 CYP3A4P08684 503 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms