RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 GALNT17Q6IS24 598 aa16.63■□□□□ 0.25
NPLOC4-209ENST00000572760 REXO1Q8N1G1 1221 aaKnown RBP16.63■□□□□ 0.25
NPLOC4-209ENST00000572760 TRIB2Q92519 343 aa16.63■□□□□ 0.25
NPLOC4-209ENST00000572760 TINF2Q9BSI4 451 aa16.63■□□□□ 0.25
NPLOC4-209ENST00000572760 FLRT1Q9NZU1 646 aa16.63■□□□□ 0.25
NPLOC4-209ENST00000572760 COL20A1Q9P218 1284 aa16.63■□□□□ 0.25
NPLOC4-209ENST00000572760 FOSP01100 380 aaPredicted RBP16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 HMGCRP04035 888 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 UBXN2AP68543 259 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 GUCY1B3Q02153 619 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 PDE4DQ08499 809 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 SAFBQ15424 915 aaKnown RBP eCLIP16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 MCTP2Q6DN12 878 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 BLIDQ8IZY5 108 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 MSL3Q8N5Y2 521 aaKnown RBP16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 SH3TC2Q8TF17 1288 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 INTS4Q96HW7 963 aaKnown RBP16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 MCOLN1Q9GZU1 580 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 PXMP2Q9NR77 195 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 GJB4Q9NTQ9 266 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 PCDHA6Q9UN73 950 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 PCDHA4Q9UN74 947 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 CNPY2Q9Y2B0 182 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 PCDHA8Q9Y5H6 950 aa16.62■□□□□ 0.25
NPLOC4-209ENST00000572760 LOC102724159A0A0B4J2E5 919 aa16.61■□□□□ 0.25
NPLOC4-209ENST00000572760 MYCLP12524 364 aaPredicted RBP16.61■□□□□ 0.25
NPLOC4-209ENST00000572760 CYP2C19P33261 490 aa16.61■□□□□ 0.25
NPLOC4-209ENST00000572760 AP3B2Q13367 1082 aa16.61■□□□□ 0.25
NPLOC4-209ENST00000572760 PWP2Q15269 919 aaKnown RBP16.61■□□□□ 0.25
NPLOC4-209ENST00000572760 KRT40Q6A162 431 aa16.61■□□□□ 0.25
NPLOC4-209ENST00000572760 ARMCX2Q7L311 632 aa16.61■□□□□ 0.25
NPLOC4-209ENST00000572760 FGD4Q96M96 766 aa16.61■□□□□ 0.25
NPLOC4-209ENST00000572760 IWS1Q96ST2 819 aa16.61■□□□□ 0.25
NPLOC4-209ENST00000572760 PHF20Q9BVI0 1012 aa16.61■□□□□ 0.25
NPLOC4-209ENST00000572760 TMEM260Q9NX78 707 aa16.61■□□□□ 0.25
NPLOC4-209ENST00000572760 H3BQV1 296 aa16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 INHAP05111 366 aa16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 KRT2P35908 639 aa16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 ANP32AP39687 249 aaKnown RBP16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 GNL2Q13823 731 aaKnown RBP16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 IFFO2Q5TF58 517 aa16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 MAMDC4Q6UXC1 1216 aa16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 SPRYD3Q8NCJ5 442 aa16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 RASGRP4Q8TDF6 673 aa16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 SHISA4Q96DD7 197 aa16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 PGBD1Q96JS3 809 aa16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 ANO3Q9BYT9 981 aa16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 SYNGAP1Q96PV0 1343 aa16.6■□□□□ 0.25
NPLOC4-209ENST00000572760 MMP1P03956 469 aa16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 NR3C2P08235 984 aa16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 PRKAR2AP13861 404 aaKnown RBP16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 PDCP20941 246 aa16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 CNGA1P29973 690 aa16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 CCND2P30279 289 aa16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 PGM5Q15124 567 aa16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 STXBP2Q15833 593 aa16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 LARP1BQ659C4 914 aaKnown RBP16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 EEPD1Q7L9B9 569 aa16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 DAGLBQ8NCG7 672 aa16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 PDCD2LQ9BRP1 358 aa16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 ABHD16BQ9H3Z7 469 aa16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 ZHX1Q9UKY1 873 aaPredicted RBP16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 ASTN1O14525 1302 aa16.59■□□□□ 0.25
NPLOC4-209ENST00000572760 CCDC194A0A1B0GVG4 234 aa16.58■□□□□ 0.24
NPLOC4-209ENST00000572760 MYCP01106 439 aaPredicted RBP16.58■□□□□ 0.24
NPLOC4-209ENST00000572760 CLK2P49760 499 aaKnown RBP16.58■□□□□ 0.24
NPLOC4-209ENST00000572760 CACNB2Q08289 660 aaPredicted RBP16.58■□□□□ 0.24
NPLOC4-209ENST00000572760 TRIM32Q13049 653 aa16.58■□□□□ 0.24
NPLOC4-209ENST00000572760 PRAMEF19Q5SWL8 479 aa16.58■□□□□ 0.24
NPLOC4-209ENST00000572760 COL13A1Q5TAT6 717 aaPredicted RBP16.58■□□□□ 0.24
NPLOC4-209ENST00000572760 DIS3L2Q8IYB7 885 aaKnown RBP16.58■□□□□ 0.24
NPLOC4-209ENST00000572760 FBXO18Q8NFZ0 1043 aa16.58■□□□□ 0.24
NPLOC4-209ENST00000572760 HMX1Q9NP08 348 aaPredicted RBP16.58■□□□□ 0.24
NPLOC4-209ENST00000572760 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.24
NPLOC4-209ENST00000572760 DDX49Q9Y6V7 483 aaKnown RBP16.58■□□□□ 0.24
NPLOC4-209ENST00000572760 LRRC37A2A6NM11 1700 aa16.58■□□□□ 0.24
NPLOC4-209ENST00000572760 ADAMTS3O15072 1205 aa16.57■□□□□ 0.24
NPLOC4-209ENST00000572760 SNAI1O95863 264 aaPredicted RBP16.57■□□□□ 0.24
NPLOC4-209ENST00000572760 ZNF76P36508 570 aa16.57■□□□□ 0.24
NPLOC4-209ENST00000572760 ACVR2BQ13705 512 aa16.57■□□□□ 0.24
NPLOC4-209ENST00000572760 KRT25Q7Z3Z0 450 aa16.57■□□□□ 0.24
NPLOC4-209ENST00000572760 MORC4Q8TE76 937 aa16.57■□□□□ 0.24
NPLOC4-209ENST00000572760 VTA1Q9NP79 307 aa16.57■□□□□ 0.24
NPLOC4-209ENST00000572760 NRBP1Q9UHY1 535 aa16.57■□□□□ 0.24
NPLOC4-209ENST00000572760 KIAA0100Q14667 2235 aaKnown RBP16.57■□□□□ 0.24
NPLOC4-209ENST00000572760 RPTORQ8N122 1335 aa16.56■□□□□ 0.24
NPLOC4-209ENST00000572760 BTBD18B2RXH4 712 aa16.56■□□□□ 0.24
NPLOC4-209ENST00000572760 EIF3JO75822 258 aaKnown RBP16.56■□□□□ 0.24
NPLOC4-209ENST00000572760 EDNRBP24530 442 aa16.56■□□□□ 0.24
NPLOC4-209ENST00000572760 NONOQ15233 471 aaKnown RBP eCLIP16.56■□□□□ 0.24
NPLOC4-209ENST00000572760 MCTP1Q6DN14 999 aa16.56■□□□□ 0.24
NPLOC4-209ENST00000572760 XRRA1Q6P2D8 792 aa16.56■□□□□ 0.24
NPLOC4-209ENST00000572760 VSIG10LQ86VR7 867 aa16.56■□□□□ 0.24
NPLOC4-209ENST00000572760 FBXO16Q8IX29 292 aaPredicted RBP16.56■□□□□ 0.24
NPLOC4-209ENST00000572760 IL31RAQ8NI17 732 aa16.56■□□□□ 0.24
NPLOC4-209ENST00000572760 OXER1Q8TDS5 423 aa16.56■□□□□ 0.24
NPLOC4-209ENST00000572760 ZFP91Q96JP5 570 aaPredicted RBP16.56■□□□□ 0.24
NPLOC4-209ENST00000572760 FRMPD4Q14CM0 1322 aa16.55■□□□□ 0.24
NPLOC4-209ENST00000572760 SREBF1P36956 1147 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms