RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 A0A1W2PQJ5 194 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 IQCA1LA6NCM1 817 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 NUDT19A8MXV4 375 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 ARNTLO00327 626 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 U2SURPO15042 1029 aaKnown RBP6.22□□□□□ -1.41
NUP88-202ENST00000570937 NPHS1O60500 1241 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 SNRPB2P08579 225 aaKnown RBP6.22□□□□□ -1.41
NUP88-202ENST00000570937 GTF2F1P35269 517 aaKnown RBP eCLIP6.22□□□□□ -1.41
NUP88-202ENST00000570937 PPP2R2AP63151 447 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 JAG1P78504 1218 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 SF3A1Q15459 793 aaKnown RBP6.22□□□□□ -1.41
NUP88-202ENST00000570937 MBLAC2Q68D91 279 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 BICRALQ6AI39 1079 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 ATG14Q6ZNE5 492 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 LZTR1Q8N653 840 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 C1orf159Q96HA4 380 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 CCDC113Q9H0I3 377 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.22□□□□□ -1.41
NUP88-202ENST00000570937 SIRPGQ9P1W8 387 aa6.22□□□□□ -1.41
NUP88-202ENST00000570937 WDR97A6NE52 1622 aa6.21□□□□□ -1.41
NUP88-202ENST00000570937 TARBP1Q13395 1621 aaKnown RBP6.21□□□□□ -1.41
NUP88-202ENST00000570937 TCAF2A6NFQ2 919 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 TACR1P25103 407 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 MAP4K2Q12851 820 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 SERINC3Q13530 473 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 RASGRF1Q13972 1273 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 SF1Q15637 639 aaKnown RBP6.21□□□□□ -1.42
NUP88-202ENST00000570937 INF2Q27J81 1249 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 PLEKHN1Q494U1 663 aaPredicted RBP6.21□□□□□ -1.42
NUP88-202ENST00000570937 SLC35F1Q5T1Q4 408 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 TMEM132EQ6IEE7 984 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 ZC3H14Q6PJT7 736 aaKnown RBP6.21□□□□□ -1.42
NUP88-202ENST00000570937 ANKLE2Q86XL3 938 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 TMEM145Q8NBT3 493 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 CNTD2Q9H8S5 307 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 SIRT5Q9NXA8 310 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 GULP1Q9UBP9 304 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 FBLN5Q9UBX5 448 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 SMG5Q9UPR3 1016 aaKnown RBP6.21□□□□□ -1.42
NUP88-202ENST00000570937 RWDD3Q9Y3V2 267 aa6.21□□□□□ -1.42
NUP88-202ENST00000570937 N4BP3O15049 544 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 MEFVO15553 781 aaPredicted RBP6.2□□□□□ -1.42
NUP88-202ENST00000570937 ECI1P42126 302 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 GRIA2P42262 883 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 KCNAB2Q13303 367 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 HSP90AA2PQ14568 343 aaPredicted RBP6.2□□□□□ -1.42
NUP88-202ENST00000570937 KCNA10Q16322 511 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 PRSS53Q2L4Q9 553 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 CCDC103Q8IW40 242 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 NETO2Q8NC67 525 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 PLEKHO2Q8TD55 490 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 DPF3Q92784 378 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 DIO2Q92813 273 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 TOX2Q96NM4 488 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 SGPP1Q9BX95 441 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 TMEFF2Q9UIK5 374 aaPredicted RBP6.2□□□□□ -1.42
NUP88-202ENST00000570937 NPFFR2Q9Y5X5 522 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 TOP2BQ02880 1626 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 IRS2Q9Y4H2 1338 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 ABCA10Q8WWZ4 1543 aa6.2□□□□□ -1.42
NUP88-202ENST00000570937 EIF4G3O43432 1585 aaKnown RBP6.19□□□□□ -1.42
NUP88-202ENST00000570937 PDPK1O15530 556 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 FGFR1P11362 822 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 KCNJ6P48051 423 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 CDR1P51861 262 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 SOGA3Q5TF21 947 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 DENND5AQ6IQ26 1287 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 TMC6Q7Z403 805 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 LRP10Q7Z4F1 713 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 CABP7Q86V35 215 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 LRRC47Q8N1G4 583 aaKnown RBP6.19□□□□□ -1.42
NUP88-202ENST00000570937 Q8N1Y9 231 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 KCTD13Q8WZ19 329 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 AARSD1Q9BTE6 412 aaKnown RBP6.19□□□□□ -1.42
NUP88-202ENST00000570937 ARHGEF4Q9NR80 690 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 PPP1R1BQ9UD71 204 aaPredicted RBP6.19□□□□□ -1.42
NUP88-202ENST00000570937 PCDHA5Q9Y5H7 936 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 GRIN2BQ13224 1484 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 GAPVD1Q14C86 1478 aa6.19□□□□□ -1.42
NUP88-202ENST00000570937 MAGI1Q96QZ7 1491 aaPredicted RBP6.18□□□□□ -1.42
NUP88-202ENST00000570937 IRS4O14654 1257 aaPredicted RBP6.18□□□□□ -1.42
NUP88-202ENST00000570937 DLX3O60479 287 aa6.18□□□□□ -1.42
NUP88-202ENST00000570937 FBLN1P23142 703 aa6.18□□□□□ -1.42
NUP88-202ENST00000570937 LTBRP36941 435 aa6.18□□□□□ -1.42
NUP88-202ENST00000570937 GTF2A2P52657 109 aa6.18□□□□□ -1.42
NUP88-202ENST00000570937 RPL11P62913 178 aaKnown RBP6.18□□□□□ -1.42
NUP88-202ENST00000570937 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
NUP88-202ENST00000570937 LDHDQ86WU2 507 aa6.18□□□□□ -1.42
NUP88-202ENST00000570937 PPIL6Q8IXY8 311 aa6.18□□□□□ -1.42
NUP88-202ENST00000570937 MZB1Q8WU39 189 aa6.18□□□□□ -1.42
NUP88-202ENST00000570937 SREK1Q8WXA9 508 aaKnown RBP6.18□□□□□ -1.42
NUP88-202ENST00000570937 TSPAN17Q96FV3 270 aa6.18□□□□□ -1.42
NUP88-202ENST00000570937 IER2Q9BTL4 223 aa6.18□□□□□ -1.42
NUP88-202ENST00000570937 TIMM13Q9Y5L4 95 aaPredicted RBP6.18□□□□□ -1.42
NUP88-202ENST00000570937 BIVM-ERCC5R4GMW8 1640 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 ZC3H12DA2A288 527 aaKnown RBP6.17□□□□□ -1.42
NUP88-202ENST00000570937 NPIPB6E9PJ23 425 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 F8W031 263 aaPredicted RBP6.17□□□□□ -1.42
NUP88-202ENST00000570937 FUCA1P04066 466 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 CFPP27918 469 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms