RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 ZNF654Q8IZM8 581 aa21.06■□□□□ 0.96
COMMD4-218ENST00000567377 SENP2Q9HC62 589 aa21.06■□□□□ 0.96
COMMD4-218ENST00000567377 BAZ2BQ9UIF8 2168 aaKnown RBP21.05■□□□□ 0.96
COMMD4-218ENST00000567377 TRIM43BA6NCK2 446 aa21.05■□□□□ 0.96
COMMD4-218ENST00000567377 KPNA6O60684 536 aa21.05■□□□□ 0.96
COMMD4-218ENST00000567377 CFBP00751 764 aa21.05■□□□□ 0.96
COMMD4-218ENST00000567377 RAG1P15918 1043 aa21.05■□□□□ 0.96
COMMD4-218ENST00000567377 BEX3Q00994 111 aa21.05■□□□□ 0.96
COMMD4-218ENST00000567377 KRT32Q14532 448 aa21.05■□□□□ 0.96
COMMD4-218ENST00000567377 ARHGEF16Q5VV41 709 aa21.05■□□□□ 0.96
COMMD4-218ENST00000567377 TBC1D5Q92609 795 aa21.05■□□□□ 0.96
COMMD4-218ENST00000567377 TRIM43Q96BQ3 446 aaPredicted RBP21.05■□□□□ 0.96
COMMD4-218ENST00000567377 TAAR1Q96RJ0 339 aa21.05■□□□□ 0.96
COMMD4-218ENST00000567377 SPZ1Q9BXG8 430 aa21.05■□□□□ 0.96
COMMD4-218ENST00000567377 DDX49Q9Y6V7 483 aaKnown RBP21.05■□□□□ 0.96
COMMD4-218ENST00000567377 LRRC37A2A6NM11 1700 aa21.04■□□□□ 0.96
COMMD4-218ENST00000567377 LAMA3Q16787 3333 aa21.04■□□□□ 0.96
COMMD4-218ENST00000567377 SH2B2O14492 632 aaPredicted RBP21.04■□□□□ 0.96
COMMD4-218ENST00000567377 EIF3JO75822 258 aaKnown RBP21.04■□□□□ 0.96
COMMD4-218ENST00000567377 FAAP100Q0VG06 881 aa21.04■□□□□ 0.96
COMMD4-218ENST00000567377 CXCL17Q6UXB2 119 aa21.04■□□□□ 0.96
COMMD4-218ENST00000567377 HOMER1Q86YM7 354 aa21.04■□□□□ 0.96
COMMD4-218ENST00000567377 SLC43A3Q8NBI5 491 aa21.04■□□□□ 0.96
COMMD4-218ENST00000567377 PIGSQ96S52 555 aa21.04■□□□□ 0.96
COMMD4-218ENST00000567377 TXNP10599 105 aaKnown RBP21.03■□□□□ 0.96
COMMD4-218ENST00000567377 IRX5P78411 483 aaPredicted RBP21.03■□□□□ 0.96
COMMD4-218ENST00000567377 ERICH6BQ5W0A0 696 aa21.03■□□□□ 0.96
COMMD4-218ENST00000567377 SH3RF1Q7Z6J0 888 aa21.03■□□□□ 0.96
COMMD4-218ENST00000567377 OR6J1Q8NGC5 347 aa21.03■□□□□ 0.96
COMMD4-218ENST00000567377 BADQ92934 168 aa21.03■□□□□ 0.96
COMMD4-218ENST00000567377 RRP36Q96EU6 259 aaKnown RBP21.03■□□□□ 0.96
COMMD4-218ENST00000567377 GPHNQ9NQX3 736 aaPredicted RBP21.03■□□□□ 0.96
COMMD4-218ENST00000567377 SLC12A7Q9Y666 1083 aa21.03■□□□□ 0.96
COMMD4-218ENST00000567377 GCOM1H8Y6P7 765 aaPredicted RBP21.02■□□□□ 0.96
COMMD4-218ENST00000567377 CYTH3O43739 400 aa21.02■□□□□ 0.96
COMMD4-218ENST00000567377 PPP1R11O60927 126 aaPredicted RBP21.02■□□□□ 0.96
COMMD4-218ENST00000567377 NR3C2P08235 984 aa21.02■□□□□ 0.96
COMMD4-218ENST00000567377 HMGB1P09429 215 aaKnown RBP21.02■□□□□ 0.96
COMMD4-218ENST00000567377 POLR2MP0CAP2 368 aa21.02■□□□□ 0.96
COMMD4-218ENST00000567377 ITGA7Q13683 1181 aa21.02■□□□□ 0.96
COMMD4-218ENST00000567377 KCNV1Q6PIU1 500 aa21.02■□□□□ 0.96
COMMD4-218ENST00000567377 SYNE3Q6ZMZ3 975 aa21.02■□□□□ 0.96
COMMD4-218ENST00000567377 SGMS1Q86VZ5 419 aa21.02■□□□□ 0.96
COMMD4-218ENST00000567377 SKAP1Q86WV1 359 aa21.02■□□□□ 0.96
COMMD4-218ENST00000567377 NEK1Q96PY6 1258 aa21.02■□□□□ 0.96
COMMD4-218ENST00000567377 PXMP2Q9NR77 195 aa21.02■□□□□ 0.96
COMMD4-218ENST00000567377 COL20A1Q9P218 1284 aa21.02■□□□□ 0.96
COMMD4-218ENST00000567377 SEC63Q9UGP8 760 aaKnown RBP21.02■□□□□ 0.96
COMMD4-218ENST00000567377 A6NJR5 290 aa21.01■□□□□ 0.95
COMMD4-218ENST00000567377 OPLAHO14841 1288 aa21.01■□□□□ 0.95
COMMD4-218ENST00000567377 TIMP1P01033 207 aa21.01■□□□□ 0.95
COMMD4-218ENST00000567377 SLC35G1Q2M3R5 365 aa21.01■□□□□ 0.95
COMMD4-218ENST00000567377 CCDC62Q6P9F0 684 aa21.01■□□□□ 0.95
COMMD4-218ENST00000567377 FAM126BQ8IXS8 530 aa21.01■□□□□ 0.95
COMMD4-218ENST00000567377 TBX21Q9UL17 535 aa21.01■□□□□ 0.95
COMMD4-218ENST00000567377 DHX32Q7L7V1 743 aaKnown RBP21■□□□□ 0.95
COMMD4-218ENST00000567377 MTG1Q9BT17 334 aaPredicted RBP21■□□□□ 0.95
COMMD4-218ENST00000567377 LTBP2Q14767 1821 aa20.99■□□□□ 0.95
COMMD4-218ENST00000567377 GH1P01241 217 aa20.99■□□□□ 0.95
COMMD4-218ENST00000567377 CD4P01730 458 aa20.99■□□□□ 0.95
COMMD4-218ENST00000567377 EIF2AK2P19525 551 aaKnown RBP20.99■□□□□ 0.95
COMMD4-218ENST00000567377 PURAQ00577 322 aaKnown RBP20.99■□□□□ 0.95
COMMD4-218ENST00000567377 FPGSQ05932 587 aa20.99■□□□□ 0.95
COMMD4-218ENST00000567377 TMEM63BQ5T3F8 832 aa20.99■□□□□ 0.95
COMMD4-218ENST00000567377 SEPT14Q6ZU15 432 aa20.99■□□□□ 0.95
COMMD4-218ENST00000567377 FANCBQ8NB91 859 aa20.99■□□□□ 0.95
COMMD4-218ENST00000567377 PDCD2LQ9BRP1 358 aa20.99■□□□□ 0.95
COMMD4-218ENST00000567377 SZT2Q5T011 3432 aa20.98■□□□□ 0.95
COMMD4-218ENST00000567377 SOX1O00570 391 aaPredicted RBP20.98■□□□□ 0.95
COMMD4-218ENST00000567377 EPB41L2O43491 1005 aaKnown RBP20.98■□□□□ 0.95
COMMD4-218ENST00000567377 REC8O95072 547 aa20.98■□□□□ 0.95
COMMD4-218ENST00000567377 SUPT20HL2P0C7V6 817 aa20.98■□□□□ 0.95
COMMD4-218ENST00000567377 TGFB3P10600 412 aa20.98■□□□□ 0.95
COMMD4-218ENST00000567377 EXOSC10Q01780 885 aaKnown RBP20.98■□□□□ 0.95
COMMD4-218ENST00000567377 MFSD5Q6N075 450 aa20.98■□□□□ 0.95
COMMD4-218ENST00000567377 VSIG10LQ86VR7 867 aa20.98■□□□□ 0.95
COMMD4-218ENST00000567377 MYL10Q9BUA6 226 aa20.98■□□□□ 0.95
COMMD4-218ENST00000567377 STAM2O75886 525 aa20.97■□□□□ 0.95
COMMD4-218ENST00000567377 MYL3P08590 195 aa20.97■□□□□ 0.95
COMMD4-218ENST00000567377 ITGB8P26012 769 aa20.97■□□□□ 0.95
COMMD4-218ENST00000567377 TEX2Q8IWB9 1127 aa20.97■□□□□ 0.95
COMMD4-218ENST00000567377 TMEM199Q8N511 208 aa20.97■□□□□ 0.95
COMMD4-218ENST00000567377 CUL5Q93034 780 aa20.97■□□□□ 0.95
COMMD4-218ENST00000567377 EMID1Q96A84 441 aaPredicted RBP20.97■□□□□ 0.95
COMMD4-218ENST00000567377 RBM28Q9NW13 759 aaKnown RBP20.97■□□□□ 0.95
COMMD4-218ENST00000567377 ARIH2O95376 493 aa20.96■□□□□ 0.95
COMMD4-218ENST00000567377 CCND2P30279 289 aa20.96■□□□□ 0.95
COMMD4-218ENST00000567377 HOXA13P31271 388 aaPredicted RBP20.96■□□□□ 0.95
COMMD4-218ENST00000567377 RCAN1P53805 252 aa20.96■□□□□ 0.95
COMMD4-218ENST00000567377 PTPN11Q06124 597 aaPredicted RBP20.96■□□□□ 0.95
COMMD4-218ENST00000567377 PPIGQ13427 754 aaKnown RBP eCLIP20.96■□□□□ 0.951e-6■■■■■ 27.9
COMMD4-218ENST00000567377 LAMC2Q13753 1193 aa20.96■□□□□ 0.95
COMMD4-218ENST00000567377 PGM5Q15124 567 aa20.96■□□□□ 0.95
COMMD4-218ENST00000567377 SHHQ15465 462 aa20.96■□□□□ 0.95
COMMD4-218ENST00000567377 NFRKBQ6P4R8 1299 aa20.96■□□□□ 0.95
COMMD4-218ENST00000567377 SRBD1Q8N5C6 995 aaKnown RBP20.96■□□□□ 0.95
COMMD4-218ENST00000567377 KCNB2Q92953 911 aa20.96■□□□□ 0.95
COMMD4-218ENST00000567377 LRCH3Q96II8 777 aa20.96■□□□□ 0.95
COMMD4-218ENST00000567377 DDX41Q9UJV9 622 aaKnown RBP20.96■□□□□ 0.95
COMMD4-218ENST00000567377 MRVI1Q9Y6F6 885 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms