RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 STAM2O75886 525 aa14.47□□□□□ -0.09
SHCBP1-204ENST00000565887 MYCP01106 439 aaPredicted RBP14.47□□□□□ -0.09
SHCBP1-204ENST00000565887 ZNF865P0CJ78 1059 aaPredicted RBP14.47□□□□□ -0.09
SHCBP1-204ENST00000565887 EDNRBP24530 442 aa14.47□□□□□ -0.09
SHCBP1-204ENST00000565887 CCND3P30281 292 aaPredicted RBP14.47□□□□□ -0.09
SHCBP1-204ENST00000565887 SCRN1Q12765 414 aa14.47□□□□□ -0.09
SHCBP1-204ENST00000565887 ME3Q16798 604 aa14.47□□□□□ -0.09
SHCBP1-204ENST00000565887 IFFO2Q5TF58 517 aa14.47□□□□□ -0.09
SHCBP1-204ENST00000565887 TAAR1Q96RJ0 339 aa14.47□□□□□ -0.09
SHCBP1-204ENST00000565887 C6orf50Q9HD87 102 aa14.47□□□□□ -0.09
SHCBP1-204ENST00000565887 RIC8AQ9NPQ8 531 aa14.47□□□□□ -0.09
SHCBP1-204ENST00000565887 Q9Y3F1 56 aa14.47□□□□□ -0.09
SHCBP1-204ENST00000565887 KIAA0100Q14667 2235 aaKnown RBP14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 hCG_1642624A0A1W2PR95 340 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 SMCO2A6NFE2 343 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 STXBP3O00186 592 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 NR3C2P08235 984 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 RARBP10826 455 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 TAL1P17542 331 aaPredicted RBP14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 RGS19P49795 217 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 ADCY7P51828 1080 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 PRAMEF19Q5SWL8 479 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 WWC2Q6AWC2 1192 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 GALNT17Q6IS24 598 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 KCNV1Q6PIU1 500 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 TRPV1Q8NER1 839 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 PHKBQ93100 1093 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 GTF3C6Q969F1 213 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 LLPHQ9BRT6 129 aaKnown RBP14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 ZMYND12Q9H0C1 365 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 SPC25Q9HBM1 224 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 PXMP2Q9NR77 195 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 ZHX1Q9UKY1 873 aaPredicted RBP14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 OGDHLQ9ULD0 1010 aa14.46□□□□□ -0.09
SHCBP1-204ENST00000565887 HTTP42858 3142 aa14.46□□□□□ -0.1
SHCBP1-204ENST00000565887 STK36Q9NRP7 1315 aa14.45□□□□□ -0.1
SHCBP1-204ENST00000565887 RBM47A0AV96 593 aaKnown RBP14.45□□□□□ -0.1
SHCBP1-204ENST00000565887 SPDYE3A6NKU9 549 aa14.45□□□□□ -0.1
SHCBP1-204ENST00000565887 MEIS2O14770 477 aa14.45□□□□□ -0.1
SHCBP1-204ENST00000565887 NKRFO15226 690 aaKnown RBP eCLIP14.45□□□□□ -0.1
SHCBP1-204ENST00000565887 DUSP11O75319 330 aaKnown RBP14.45□□□□□ -0.1
SHCBP1-204ENST00000565887 HOXA13P31271 388 aaPredicted RBP14.45□□□□□ -0.1
SHCBP1-204ENST00000565887 PKN1Q16512 942 aa14.45□□□□□ -0.1
SHCBP1-204ENST00000565887 CCDC144BQ3MJ40 725 aa14.45□□□□□ -0.1
SHCBP1-204ENST00000565887 LHX8Q68G74 356 aa14.45□□□□□ -0.1
SHCBP1-204ENST00000565887 VSIG10LQ86VR7 867 aa14.45□□□□□ -0.1
SHCBP1-204ENST00000565887 FCHSD1Q86WN1 690 aa14.45□□□□□ -0.1
SHCBP1-204ENST00000565887 GPKOWQ92917 476 aaPredicted RBP eCLIP14.45□□□□□ -0.1
SHCBP1-204ENST00000565887 ASTN1O14525 1302 aa14.44□□□□□ -0.1
SHCBP1-204ENST00000565887 POTEFA5A3E0 1075 aa14.44□□□□□ -0.1
SHCBP1-204ENST00000565887 TGFB3P10600 412 aa14.44□□□□□ -0.1
SHCBP1-204ENST00000565887 EN2P19622 333 aaPredicted RBP14.44□□□□□ -0.1
SHCBP1-204ENST00000565887 CCND2P30279 289 aa14.44□□□□□ -0.1
SHCBP1-204ENST00000565887 TNFAIP2Q03169 654 aa14.44□□□□□ -0.1
SHCBP1-204ENST00000565887 AP3B2Q13367 1082 aa14.44□□□□□ -0.1
SHCBP1-204ENST00000565887 USP17L6PQ6QN14 398 aa14.44□□□□□ -0.1
SHCBP1-204ENST00000565887 SCFD2Q8WU76 684 aa14.44□□□□□ -0.1
SHCBP1-204ENST00000565887 PURBQ96QR8 312 aaKnown RBP14.44□□□□□ -0.1
SHCBP1-204ENST00000565887 PDCD2LQ9BRP1 358 aa14.44□□□□□ -0.1
SHCBP1-204ENST00000565887 KATNBL1Q9H079 304 aa14.44□□□□□ -0.1
SHCBP1-204ENST00000565887 COL20A1Q9P218 1284 aa14.44□□□□□ -0.1
SHCBP1-204ENST00000565887 EIF2AK2P19525 551 aaKnown RBP14.43□□□□□ -0.1
SHCBP1-204ENST00000565887 SOX10P56693 466 aa14.43□□□□□ -0.1
SHCBP1-204ENST00000565887 TTLL4Q14679 1199 aa14.43□□□□□ -0.1
SHCBP1-204ENST00000565887 PGM5Q15124 567 aa14.43□□□□□ -0.1
SHCBP1-204ENST00000565887 GNPTABQ3T906 1256 aa14.43□□□□□ -0.1
SHCBP1-204ENST00000565887 TAPT1Q6NXT6 567 aa14.43□□□□□ -0.1
SHCBP1-204ENST00000565887 NOL8Q76FK4 1167 aaKnown RBP14.43□□□□□ -0.1
SHCBP1-204ENST00000565887 RNF180Q86T96 592 aa14.43□□□□□ -0.1
SHCBP1-204ENST00000565887 ORC3Q9UBD5 711 aaPredicted RBP14.43□□□□□ -0.1
SHCBP1-204ENST00000565887 FRMPD4Q14CM0 1322 aa14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 MAFGO15525 162 aa14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 NLRP5P59047 1200 aa14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 NKX3-2P78367 333 aa14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 HMGN5P82970 282 aaKnown RBP14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 DUSP28Q4G0W2 176 aa14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 BRDTQ58F21 947 aaPredicted RBP14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 PCNX4Q63HM2 1172 aa14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 NECAB1Q8N987 351 aa14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 TSEN34Q9BSV6 310 aaKnown RBP14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 WDR11Q9BZH6 1224 aa14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 AP5M1Q9H0R1 490 aa14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 XPNPEP3Q9NQH7 507 aa14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 PCDHA6Q9UN73 950 aa14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 KIF3AQ9Y496 699 aa14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 PCDHA8Q9Y5H6 950 aa14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 RBBP6Q7Z6E9 1792 aaKnown RBP14.42□□□□□ -0.1
SHCBP1-204ENST00000565887 KBTBD13C9JR72 458 aa14.41□□□□□ -0.1
SHCBP1-204ENST00000565887 DNM1LO00429 736 aa14.41□□□□□ -0.1
SHCBP1-204ENST00000565887 ZEB2O60315 1214 aa14.41□□□□□ -0.1
SHCBP1-204ENST00000565887 CAPN15O75808 1086 aa14.41□□□□□ -0.1
SHCBP1-204ENST00000565887 MYCLP12524 364 aaPredicted RBP14.41□□□□□ -0.1
SHCBP1-204ENST00000565887 CLK2P49760 499 aaKnown RBP14.41□□□□□ -0.1
SHCBP1-204ENST00000565887 TYW1BQ6NUM6 668 aa14.41□□□□□ -0.1
SHCBP1-204ENST00000565887 EEPD1Q7L9B9 569 aa14.41□□□□□ -0.1
SHCBP1-204ENST00000565887 NECAB2Q7Z6G3 386 aa14.41□□□□□ -0.1
SHCBP1-204ENST00000565887 NLRX1Q86UT6 975 aa14.41□□□□□ -0.1
SHCBP1-204ENST00000565887 REXO1Q8N1G1 1221 aaKnown RBP14.41□□□□□ -0.1
SHCBP1-204ENST00000565887 PCSK9Q8NBP7 692 aaKnown RBP14.41□□□□□ -0.1
SHCBP1-204ENST00000565887 CDHR1Q96JP9 859 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms