RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 NKX3-2P78367 333 aa14.22□□□□□ -0.13
SPG7-211ENST00000565370 GHRHRQ02643 423 aa14.22□□□□□ -0.13
SPG7-211ENST00000565370 TTLL4Q14679 1199 aa14.22□□□□□ -0.13
SPG7-211ENST00000565370 STXBP2Q15833 593 aa14.22□□□□□ -0.13
SPG7-211ENST00000565370 TSGA10IPQ3SY00 556 aa14.22□□□□□ -0.13
SPG7-211ENST00000565370 CCSAPQ6IQ19 270 aaPredicted RBP14.22□□□□□ -0.13
SPG7-211ENST00000565370 DHX32Q7L7V1 743 aaKnown RBP14.22□□□□□ -0.13
SPG7-211ENST00000565370 SGMS1Q86VZ5 419 aa14.22□□□□□ -0.13
SPG7-211ENST00000565370 OR6J1Q8NGC5 347 aa14.22□□□□□ -0.13
SPG7-211ENST00000565370 GDF15Q99988 308 aa14.22□□□□□ -0.13
SPG7-211ENST00000565370 GPHNQ9NQX3 736 aaPredicted RBP14.22□□□□□ -0.13
SPG7-211ENST00000565370 PDLIM7Q9NR12 457 aa14.22□□□□□ -0.13
SPG7-211ENST00000565370 PDGFCQ9NRA1 345 aa14.22□□□□□ -0.13
SPG7-211ENST00000565370 RBM28Q9NW13 759 aaKnown RBP14.22□□□□□ -0.13
SPG7-211ENST00000565370 DDX49Q9Y6V7 483 aaKnown RBP14.22□□□□□ -0.13
SPG7-211ENST00000565370 RBM47A0AV96 593 aaKnown RBP14.21□□□□□ -0.13
SPG7-211ENST00000565370 DCDC2CA8MYV0 355 aa14.21□□□□□ -0.13
SPG7-211ENST00000565370 GCOM1H8Y6P7 765 aaPredicted RBP14.21□□□□□ -0.13
SPG7-211ENST00000565370 SOX1O00570 391 aaPredicted RBP14.21□□□□□ -0.13
SPG7-211ENST00000565370 TLR3O15455 904 aaKnown RBP14.21□□□□□ -0.13
SPG7-211ENST00000565370 DYNC1LI2O43237 492 aaPredicted RBP14.21□□□□□ -0.13
SPG7-211ENST00000565370 EPB41L2O43491 1005 aaKnown RBP14.21□□□□□ -0.13
SPG7-211ENST00000565370 CYTH3O43739 400 aa14.21□□□□□ -0.13
SPG7-211ENST00000565370 POLR2MP0CAP2 368 aa14.21□□□□□ -0.13
SPG7-211ENST00000565370 EIF2AK2P19525 551 aaKnown RBP14.21□□□□□ -0.13
SPG7-211ENST00000565370 RXRAP19793 462 aa14.21□□□□□ -0.13
SPG7-211ENST00000565370 BMP8BP34820 402 aa14.21□□□□□ -0.13
SPG7-211ENST00000565370 BEX3Q00994 111 aa14.21□□□□□ -0.13
SPG7-211ENST00000565370 APOA5Q6Q788 366 aa14.21□□□□□ -0.13
SPG7-211ENST00000565370 PIBF1Q8WXW3 757 aa14.21□□□□□ -0.13
SPG7-211ENST00000565370 CUL5Q93034 780 aa14.21□□□□□ -0.13
SPG7-211ENST00000565370 UBE2OQ9C0C9 1292 aaKnown RBP14.21□□□□□ -0.13
SPG7-211ENST00000565370 PXMP2Q9NR77 195 aa14.21□□□□□ -0.13
SPG7-211ENST00000565370 POLR3EQ9NVU0 708 aa14.21□□□□□ -0.13
SPG7-211ENST00000565370 BAZ2BQ9UIF8 2168 aaKnown RBP14.2□□□□□ -0.14
SPG7-211ENST00000565370 COL6A3P12111 3177 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 KIAA1217Q5T5P2 1943 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 ZBTB43O43298 467 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 HSPA4P34932 840 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 RCAN1P53805 252 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 MDM2Q00987 491 aaPredicted RBP14.2□□□□□ -0.14
SPG7-211ENST00000565370 TLE2Q04725 743 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 SLC35G1Q2M3R5 365 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 BLOC1S2Q6QNY1 142 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 TMTC3Q6ZXV5 915 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 ANKRD33Q7Z3H0 272 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 JAKMIP1Q96N16 626 aaKnown RBP14.2□□□□□ -0.14
SPG7-211ENST00000565370 TOX2Q96NM4 488 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 TAAR1Q96RJ0 339 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 SEZ6LQ9BYH1 1024 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 COL20A1Q9P218 1284 aa14.2□□□□□ -0.14
SPG7-211ENST00000565370 GOLGA8AA7E2F4 631 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 GOLGA8BA8MQT2 603 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 OPLAHO14841 1288 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 PLEKHA8P1O95397 391 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 TXNP10599 105 aaKnown RBP14.19□□□□□ -0.14
SPG7-211ENST00000565370 PSMA5P28066 241 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 CCND2P30279 289 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 HOXA13P31271 388 aaPredicted RBP14.19□□□□□ -0.14
SPG7-211ENST00000565370 RTN1Q16799 776 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 ADCK5Q3MIX3 580 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 RAB11FIP4Q86YS3 637 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 RASEFQ8IZ41 740 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 TDHQ8IZJ6 230 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 FANCBQ8NB91 859 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 TBC1D5Q92609 795 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 LRCH3Q96II8 777 aa14.19□□□□□ -0.14
SPG7-211ENST00000565370 NAP1L2Q9ULW6 460 aaPredicted RBP14.19□□□□□ -0.14
SPG7-211ENST00000565370 KLF18A0A0U1RQI7 1052 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 ARVCFO00192 962 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 CTAGE5O15320 804 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 EIF3JO75822 258 aaKnown RBP14.18□□□□□ -0.14
SPG7-211ENST00000565370 GH1P01241 217 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 NR3C2P08235 984 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 IRX5P78411 483 aaPredicted RBP14.18□□□□□ -0.14
SPG7-211ENST00000565370 CXCL17Q6UXB2 119 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 SEPT14Q6ZU15 432 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 FCHSD1Q86WN1 690 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 SRBD1Q8N5C6 995 aaKnown RBP14.18□□□□□ -0.14
SPG7-211ENST00000565370 SMARCC2Q8TAQ2 1214 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 TCEANC2Q96MN5 208 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 PDCD2LQ9BRP1 358 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 TMEM39AQ9NV64 488 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 SNX14Q9Y5W7 946 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 MRVI1Q9Y6F6 885 aa14.18□□□□□ -0.14
SPG7-211ENST00000565370 CCDC196A0A1B0GTZ2 297 aa14.17□□□□□ -0.14
SPG7-211ENST00000565370 hCG_1984214I3L0E3 225 aa14.17□□□□□ -0.14
SPG7-211ENST00000565370 KPNA6O60684 536 aa14.17□□□□□ -0.14
SPG7-211ENST00000565370 EIF5BO60841 1220 aaKnown RBP14.17□□□□□ -0.14
SPG7-211ENST00000565370 MYL3P08590 195 aa14.17□□□□□ -0.14
SPG7-211ENST00000565370 MYCLP12524 364 aaPredicted RBP14.17□□□□□ -0.14
SPG7-211ENST00000565370 RAG1P15918 1043 aa14.17□□□□□ -0.14
SPG7-211ENST00000565370 EXOSC10Q01780 885 aaKnown RBP14.17□□□□□ -0.14
SPG7-211ENST00000565370 COL9A3Q14050 684 aaPredicted RBP14.17□□□□□ -0.14
SPG7-211ENST00000565370 PGM5Q15124 567 aa14.17□□□□□ -0.14
SPG7-211ENST00000565370 GNPTABQ3T906 1256 aa14.17□□□□□ -0.14
SPG7-211ENST00000565370 KCNV1Q6PIU1 500 aa14.17□□□□□ -0.14
SPG7-211ENST00000565370 ZNF713Q8N859 430 aaPredicted RBP14.17□□□□□ -0.14
SPG7-211ENST00000565370 KCNB2Q92953 911 aa14.17□□□□□ -0.14
SPG7-211ENST00000565370 FRMPD4Q14CM0 1322 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms