RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 BICDL1Q6ZP65 573 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 MREGQ8N565 214 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 JADE2Q9NQC1 790 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 GOLGA6L10A6NI86 522 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 RASSF10A6NK89 507 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 ZSCAN9O15535 394 aaPredicted RBP20.57■□□□□ 0.88
RAB40C-206ENST00000561781 CCND1P24385 295 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 CDC25CP30307 473 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 KRT9P35527 623 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 CUL4BQ13620 913 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 DTNBP1Q96EV8 351 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 NDST4Q9H3R1 872 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 COPRSQ9NQ92 184 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 PAG1Q9NWQ8 432 aa20.57■□□□□ 0.88
RAB40C-206ENST00000561781 ABLIM1O14639 778 aa20.56■□□□□ 0.88
RAB40C-206ENST00000561781 CLTAP09496 248 aa20.56■□□□□ 0.88
RAB40C-206ENST00000561781 ALADP13716 330 aa20.56■□□□□ 0.88
RAB40C-206ENST00000561781 KRT83P78385 493 aa20.56■□□□□ 0.88
RAB40C-206ENST00000561781 CUL3Q13618 768 aa20.56■□□□□ 0.88
RAB40C-206ENST00000561781 AGAP11Q8TF27 550 aa20.56■□□□□ 0.88
RAB40C-206ENST00000561781 TBC1D5Q92609 795 aa20.56■□□□□ 0.88
RAB40C-206ENST00000561781 RBM41Q96IZ5 413 aaKnown RBP20.56■□□□□ 0.88
RAB40C-206ENST00000561781 ACTN4O43707 911 aaKnown RBP20.56■□□□□ 0.88
RAB40C-206ENST00000561781 IGKV5-2P06315 115 aa20.56■□□□□ 0.88
RAB40C-206ENST00000561781 IDEP14735 1019 aa20.56■□□□□ 0.88
RAB40C-206ENST00000561781 ANTXR2P58335 489 aa20.56■□□□□ 0.88
RAB40C-206ENST00000561781 PAK2Q13177 524 aa20.56■□□□□ 0.88
RAB40C-206ENST00000561781 ZNF268Q14587 947 aaPredicted RBP20.56■□□□□ 0.88
RAB40C-206ENST00000561781 MB21D2Q8IYB1 491 aaPredicted RBP20.56■□□□□ 0.88
RAB40C-206ENST00000561781 OSBPL1AQ9BXW6 950 aa20.56■□□□□ 0.88
RAB40C-206ENST00000561781 CAMTA2O94983 1202 aa20.55■□□□□ 0.88
RAB40C-206ENST00000561781 KIF5BP33176 963 aa20.55■□□□□ 0.88
RAB40C-206ENST00000561781 PTPN12Q05209 780 aaKnown RBP20.55■□□□□ 0.88
RAB40C-206ENST00000561781 BYSLQ13895 437 aaKnown RBP20.55■□□□□ 0.88
RAB40C-206ENST00000561781 QPCTQ16769 361 aa20.55■□□□□ 0.88
RAB40C-206ENST00000561781 PNMA8AQ86V59 439 aaPredicted RBP20.55■□□□□ 0.88
RAB40C-206ENST00000561781 PHKBQ93100 1093 aa20.55■□□□□ 0.88
RAB40C-206ENST00000561781 BLOC1S6Q9UL45 172 aa20.55■□□□□ 0.88
RAB40C-206ENST00000561781 LRRD1A4D1F6 860 aa20.55■□□□□ 0.88
RAB40C-206ENST00000561781 PDLIM1O00151 329 aa20.55■□□□□ 0.88
RAB40C-206ENST00000561781 CNGA1P29973 690 aa20.55■□□□□ 0.88
RAB40C-206ENST00000561781 HERVK_113P62684 666 aa20.55■□□□□ 0.88
RAB40C-206ENST00000561781 MAATS1Q7Z4T9 603 aa20.55■□□□□ 0.88
RAB40C-206ENST00000561781 SMYD4Q8IYR2 804 aaPredicted RBP20.55■□□□□ 0.88
RAB40C-206ENST00000561781 SPATA4Q8NEY3 305 aa20.55■□□□□ 0.88
RAB40C-206ENST00000561781 FBXO2Q9UK22 296 aaPredicted RBP20.55■□□□□ 0.88
RAB40C-206ENST00000561781 M0R2C6 588 aa20.54■□□□□ 0.88
RAB40C-206ENST00000561781 N4BP3O15049 544 aa20.54■□□□□ 0.88
RAB40C-206ENST00000561781 CREG2Q8IUH2 290 aa20.54■□□□□ 0.88
RAB40C-206ENST00000561781 IFT20Q8IY31 132 aa20.54■□□□□ 0.88
RAB40C-206ENST00000561781 ATL2Q8NHH9 583 aa20.54■□□□□ 0.88
RAB40C-206ENST00000561781 G3BP2Q9UN86 482 aaKnown RBP20.54■□□□□ 0.88
RAB40C-206ENST00000561781 ATP5J2-PTCD1G3V325 749 aa20.54■□□□□ 0.88
RAB40C-206ENST00000561781 KRT31Q15323 416 aa20.54■□□□□ 0.88
RAB40C-206ENST00000561781 BICD1Q96G01 975 aa20.54■□□□□ 0.88
RAB40C-206ENST00000561781 VPS16Q9H269 839 aa20.54■□□□□ 0.88
RAB40C-206ENST00000561781 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.54■□□□□ 0.88
RAB40C-206ENST00000561781 CCT8L1PA6NM43 557 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 COBLO75128 1261 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 GYS1P13807 737 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 RFX5P48382 616 aaPredicted RBP20.53■□□□□ 0.88
RAB40C-206ENST00000561781 CCNG1P51959 295 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 MRPS25P82663 173 aaKnown RBP20.53■□□□□ 0.88
RAB40C-206ENST00000561781 SLC7A5Q01650 507 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 KANK3Q6NY19 840 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 PIK3R5Q8WYR1 880 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 ANKIB1Q9P2G1 1089 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 SLC12A4Q9UP95 1085 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 ZPR1O75312 459 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 NPTXRO95502 500 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 PAEPP09466 180 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 RXRAP19793 462 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 PTPREP23469 700 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 HPDP32754 393 aaPredicted RBP20.53■□□□□ 0.88
RAB40C-206ENST00000561781 HAUS3Q68CZ6 603 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 SLC12A6Q9UHW9 1150 aa20.53■□□□□ 0.88
RAB40C-206ENST00000561781 ATF5Q9Y2D1 282 aaPredicted RBP20.53■□□□□ 0.88
RAB40C-206ENST00000561781 IFIT3O14879 490 aaKnown RBP20.52■□□□□ 0.88
RAB40C-206ENST00000561781 ABL2P42684 1182 aa20.52■□□□□ 0.88
RAB40C-206ENST00000561781 IMMTQ16891 758 aaKnown RBP20.52■□□□□ 0.88
RAB40C-206ENST00000561781 KIF6Q6ZMV9 814 aa20.52■□□□□ 0.88
RAB40C-206ENST00000561781 ANKRD13DQ6ZTN6 518 aa20.52■□□□□ 0.88
RAB40C-206ENST00000561781 RIC3Q7Z5B4 369 aa20.52■□□□□ 0.88
RAB40C-206ENST00000561781 CCDC24Q8N4L8 307 aa20.52■□□□□ 0.88
RAB40C-206ENST00000561781 SNX12Q9UMY4 172 aa20.52■□□□□ 0.88
RAB40C-206ENST00000561781 PRLRP16471 622 aa20.52■□□□□ 0.87
RAB40C-206ENST00000561781 CASP1P29466 404 aa20.52■□□□□ 0.87
RAB40C-206ENST00000561781 MXRA7P84157 204 aa20.52■□□□□ 0.87
RAB40C-206ENST00000561781 SEPT2Q15019 361 aa20.52■□□□□ 0.87
RAB40C-206ENST00000561781 RRP12Q5JTH9 1297 aaKnown RBP20.52■□□□□ 0.87
RAB40C-206ENST00000561781 USP49Q70CQ1 688 aa20.52■□□□□ 0.87
RAB40C-206ENST00000561781 CPLX4Q7Z7G2 160 aa20.52■□□□□ 0.87
RAB40C-206ENST00000561781 NOC3LQ8WTT2 800 aaKnown RBP20.52■□□□□ 0.87
RAB40C-206ENST00000561781 TEKT4Q8WW24 435 aa20.52■□□□□ 0.87
RAB40C-206ENST00000561781 TAF1DQ9H5J8 278 aaPredicted RBP20.52■□□□□ 0.87
RAB40C-206ENST00000561781 TMBIM4Q9HC24 238 aa20.52■□□□□ 0.87
RAB40C-206ENST00000561781 GOLGA6L10A0A0M3HER8 536 aa20.51■□□□□ 0.87
RAB40C-206ENST00000561781 DDX58O95786 925 aaKnown RBP20.51■□□□□ 0.87
RAB40C-206ENST00000561781 USP4Q13107 963 aa20.51■□□□□ 0.87
RAB40C-206ENST00000561781 TRIM29Q14134 588 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms