RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 ST3GAL1Q11201 340 aa18.78■□□□□ 0.6
USB1-204ENST00000561568 ARMCX2Q7L311 632 aa18.78■□□□□ 0.6
USB1-204ENST00000561568 VPS54Q9P1Q0 977 aa18.78■□□□□ 0.6
USB1-204ENST00000561568 COL20A1Q9P218 1284 aa18.78■□□□□ 0.6
USB1-204ENST00000561568 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.78■□□□□ 0.6
USB1-204ENST00000561568 SPDYE3A6NKU9 549 aa18.77■□□□□ 0.6
USB1-204ENST00000561568 PRKAR2AP13861 404 aaKnown RBP18.77■□□□□ 0.6
USB1-204ENST00000561568 PDE4DQ08499 809 aa18.77■□□□□ 0.6
USB1-204ENST00000561568 TRIM32Q13049 653 aa18.77■□□□□ 0.6
USB1-204ENST00000561568 ALG1Q9BT22 464 aa18.77■□□□□ 0.6
USB1-204ENST00000561568 PXMP2Q9NR77 195 aa18.77■□□□□ 0.6
USB1-204ENST00000561568 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.77■□□□□ 0.6
USB1-204ENST00000561568 JAK2O60674 1132 aa18.76■□□□□ 0.59
USB1-204ENST00000561568 NR3C2P08235 984 aa18.76■□□□□ 0.59
USB1-204ENST00000561568 EDNRBP24530 442 aa18.76■□□□□ 0.59
USB1-204ENST00000561568 ACVR2BQ13705 512 aa18.76■□□□□ 0.59
USB1-204ENST00000561568 STXBP2Q15833 593 aa18.76■□□□□ 0.59
USB1-204ENST00000561568 FAM184AQ8NB25 1140 aa18.76■□□□□ 0.59
USB1-204ENST00000561568 ABHD8Q96I13 439 aa18.76■□□□□ 0.59
USB1-204ENST00000561568 TMEM106CQ9BVX2 250 aa18.76■□□□□ 0.59
USB1-204ENST00000561568 EHMT1Q9H9B1 1298 aa18.76■□□□□ 0.59
USB1-204ENST00000561568 PCDHA6Q9UN73 950 aa18.76■□□□□ 0.59
USB1-204ENST00000561568 KIF3AQ9Y496 699 aa18.76■□□□□ 0.59
USB1-204ENST00000561568 PCDHA8Q9Y5H6 950 aa18.76■□□□□ 0.59
USB1-204ENST00000561568 ASTN1O14525 1302 aa18.75■□□□□ 0.59
USB1-204ENST00000561568 EIF3JO75822 258 aaKnown RBP18.75■□□□□ 0.59
USB1-204ENST00000561568 CYBAP13498 195 aa18.75■□□□□ 0.59
USB1-204ENST00000561568 CCL5P13501 91 aa18.75■□□□□ 0.59
USB1-204ENST00000561568 CAPN2P17655 700 aa18.75■□□□□ 0.59
USB1-204ENST00000561568 TRIM29Q14134 588 aa18.75■□□□□ 0.59
USB1-204ENST00000561568 PRAMEF19Q5SWL8 479 aa18.75■□□□□ 0.59
USB1-204ENST00000561568 XRRA1Q6P2D8 792 aa18.75■□□□□ 0.59
USB1-204ENST00000561568 AIFM3Q96NN9 605 aa18.75■□□□□ 0.59
USB1-204ENST00000561568 PDCD2LQ9BRP1 358 aa18.75■□□□□ 0.59
USB1-204ENST00000561568 RNF208Q9H0X6 261 aa18.75■□□□□ 0.59
USB1-204ENST00000561568 PCDHA4Q9UN74 947 aa18.75■□□□□ 0.59
USB1-204ENST00000561568 K7ELQ4 463 aaPredicted RBP18.74■□□□□ 0.59
USB1-204ENST00000561568 MSCO60682 206 aa18.74■□□□□ 0.59
USB1-204ENST00000561568 ZNF865P0CJ78 1059 aaPredicted RBP18.74■□□□□ 0.59
USB1-204ENST00000561568 EIF2AK2P19525 551 aaKnown RBP18.74■□□□□ 0.59
USB1-204ENST00000561568 CNGA1P29973 690 aa18.74■□□□□ 0.59
USB1-204ENST00000561568 CLK2P49760 499 aaKnown RBP18.74■□□□□ 0.59
USB1-204ENST00000561568 AP3B2Q13367 1082 aa18.74■□□□□ 0.59
USB1-204ENST00000561568 CUL4AQ13619 759 aa18.74■□□□□ 0.59
USB1-204ENST00000561568 PGM5Q15124 567 aa18.74■□□□□ 0.59
USB1-204ENST00000561568 MTFR1Q15390 333 aa18.74■□□□□ 0.59
USB1-204ENST00000561568 UBE2SQ16763 222 aa18.74■□□□□ 0.59
USB1-204ENST00000561568 VSIG10LQ86VR7 867 aa18.74■□□□□ 0.59
USB1-204ENST00000561568 REXO1Q8N1G1 1221 aaKnown RBP18.74■□□□□ 0.59
USB1-204ENST00000561568 PHF20Q9BVI0 1012 aa18.74■□□□□ 0.59
USB1-204ENST00000561568 UNC93B1Q9H1C4 597 aa18.74■□□□□ 0.59
USB1-204ENST00000561568 VTA1Q9NP79 307 aa18.74■□□□□ 0.59
USB1-204ENST00000561568 FAM184BQ9ULE4 1060 aa18.74■□□□□ 0.59
USB1-204ENST00000561568 PLXNA1Q9UIW2 1896 aa18.73■□□□□ 0.59
USB1-204ENST00000561568 SEPT4O43236 478 aa18.73■□□□□ 0.59
USB1-204ENST00000561568 DTNBO60941 627 aa18.73■□□□□ 0.59
USB1-204ENST00000561568 STAM2O75886 525 aa18.73■□□□□ 0.59
USB1-204ENST00000561568 CCND2P30279 289 aa18.73■□□□□ 0.59
USB1-204ENST00000561568 IQSEC1Q6DN90 963 aa18.73■□□□□ 0.59
USB1-204ENST00000561568 HSCBQ8IWL3 235 aa18.73■□□□□ 0.59
USB1-204ENST00000561568 BLIDQ8IZY5 108 aa18.73■□□□□ 0.59
USB1-204ENST00000561568 DAGLBQ8NCG7 672 aa18.73■□□□□ 0.59
USB1-204ENST00000561568 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.73■□□□□ 0.59
USB1-204ENST00000561568 MYCP01106 439 aaPredicted RBP18.72■□□□□ 0.59
USB1-204ENST00000561568 GJB1P08034 283 aa18.72■□□□□ 0.59
USB1-204ENST00000561568 MYCLP12524 364 aaPredicted RBP18.72■□□□□ 0.59
USB1-204ENST00000561568 CCND3P30281 292 aaPredicted RBP18.72■□□□□ 0.59
USB1-204ENST00000561568 JAKMIP3Q5VZ66 844 aa18.72■□□□□ 0.59
USB1-204ENST00000561568 PCNX4Q63HM2 1172 aa18.72■□□□□ 0.59
USB1-204ENST00000561568 EEPD1Q7L9B9 569 aa18.72■□□□□ 0.59
USB1-204ENST00000561568 TRPV1Q8NER1 839 aa18.72■□□□□ 0.59
USB1-204ENST00000561568 SHISA4Q96DD7 197 aa18.72■□□□□ 0.59
USB1-204ENST00000561568 INTS4Q96HW7 963 aaKnown RBP18.72■□□□□ 0.59
USB1-204ENST00000561568 KATNBL1Q9H079 304 aa18.72■□□□□ 0.59
USB1-204ENST00000561568 PAK6Q9NQU5 681 aaPredicted RBP18.72■□□□□ 0.59
USB1-204ENST00000561568 ZHX1Q9UKY1 873 aaPredicted RBP18.72■□□□□ 0.59
USB1-204ENST00000561568 KCNJ14Q9UNX9 436 aa18.72■□□□□ 0.59
USB1-204ENST00000561568 SMC3Q9UQE7 1217 aa18.72■□□□□ 0.59
USB1-204ENST00000561568 FRMPD4Q14CM0 1322 aa18.72■□□□□ 0.59
USB1-204ENST00000561568 AKR1A1P14550 325 aa18.71■□□□□ 0.59
USB1-204ENST00000561568 CCDC144BQ3MJ40 725 aa18.71■□□□□ 0.59
USB1-204ENST00000561568 TAPT1Q6NXT6 567 aa18.71■□□□□ 0.59
USB1-204ENST00000561568 C8orf76Q96K31 380 aa18.71■□□□□ 0.59
USB1-204ENST00000561568 BRMS1Q9HCU9 246 aa18.71■□□□□ 0.59
USB1-204ENST00000561568 TMEM260Q9NX78 707 aa18.71■□□□□ 0.59
USB1-204ENST00000561568 RBM47A0AV96 593 aaKnown RBP18.7■□□□□ 0.58
USB1-204ENST00000561568 SGPL1O95470 568 aa18.7■□□□□ 0.58
USB1-204ENST00000561568 SAFBQ15424 915 aaKnown RBP eCLIP18.7■□□□□ 0.58
USB1-204ENST00000561568 KRT40Q6A162 431 aa18.7■□□□□ 0.58
USB1-204ENST00000561568 KCNV1Q6PIU1 500 aa18.7■□□□□ 0.58
USB1-204ENST00000561568 ANO3Q9BYT9 981 aa18.7■□□□□ 0.58
USB1-204ENST00000561568 DDX20Q9UHI6 824 aaKnown RBP18.7■□□□□ 0.58
USB1-204ENST00000561568 CCDC85CA6NKD9 419 aa18.69■□□□□ 0.58
USB1-204ENST00000561568 MMP1P03956 469 aa18.69■□□□□ 0.58
USB1-204ENST00000561568 TGFB3P10600 412 aa18.69■□□□□ 0.58
USB1-204ENST00000561568 GJB2P29033 226 aa18.69■□□□□ 0.58
USB1-204ENST00000561568 TNFAIP2Q03169 654 aa18.69■□□□□ 0.58
USB1-204ENST00000561568 NPY5RQ15761 445 aa18.69■□□□□ 0.58
USB1-204ENST00000561568 FBXO16Q8IX29 292 aaPredicted RBP18.69■□□□□ 0.58
USB1-204ENST00000561568 FBXO18Q8NFZ0 1043 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 435.5 ms