RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 EHMT1Q9H9B1 1298 aa16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 DAXXQ9UER7 740 aaPredicted RBP16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 FAM184BQ9ULE4 1060 aa16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 LCTP09848 1927 aa16.08■□□□□ 0.16
PKNOX1-209ENST00000560448 FOSP01100 380 aaPredicted RBP16.07■□□□□ 0.16
PKNOX1-209ENST00000560448 XBP1P17861 261 aa16.07■□□□□ 0.16
PKNOX1-209ENST00000560448 GNA11P29992 359 aa16.07■□□□□ 0.16
PKNOX1-209ENST00000560448 PDE4DQ08499 809 aa16.07■□□□□ 0.16
PKNOX1-209ENST00000560448 ARHGEF16Q5VV41 709 aa16.07■□□□□ 0.16
PKNOX1-209ENST00000560448 BICD2Q8TD16 824 aa16.07■□□□□ 0.16
PKNOX1-209ENST00000560448 ANP32EQ9BTT0 268 aa16.07■□□□□ 0.16
PKNOX1-209ENST00000560448 SLC26A6Q9BXS9 759 aa16.07■□□□□ 0.16
PKNOX1-209ENST00000560448 PXMP2Q9NR77 195 aa16.07■□□□□ 0.16
PKNOX1-209ENST00000560448 OGDHLQ9ULD0 1010 aa16.07■□□□□ 0.16
PKNOX1-209ENST00000560448 ASTN1O14525 1302 aa16.07■□□□□ 0.16
PKNOX1-209ENST00000560448 FRMPD4Q14CM0 1322 aa16.07■□□□□ 0.16
PKNOX1-209ENST00000560448 STXBP3O00186 592 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 MEIS2O14770 477 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 RARBP10826 455 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 CNGA1P29973 690 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 CCND3P30281 292 aaPredicted RBP16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 RGS19P49795 217 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 STK3Q13188 491 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 AP3B2Q13367 1082 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 STXBP2Q15833 593 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 ME3Q16798 604 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 IQSEC1Q6DN90 963 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 GALNT17Q6IS24 598 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 KATNBL1Q9H079 304 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 ZMYND12Q9H0C1 365 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 NCOA5Q9HCD5 579 aaKnown RBP16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 RIC8AQ9NPQ8 531 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 ZHX1Q9UKY1 873 aaPredicted RBP16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 Q9Y3F1 56 aa16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 KIAA0100Q14667 2235 aaKnown RBP16.06■□□□□ 0.16
PKNOX1-209ENST00000560448 SPDYE3A6NKU9 549 aa16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 NKRFO15226 690 aaKnown RBP eCLIP16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 DUSP11O75319 330 aaKnown RBP16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 EIF3JO75822 258 aaKnown RBP16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 ADCY7P51828 1080 aa16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 PKN1Q16512 942 aa16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 LHX8Q68G74 356 aa16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 KCNV1Q6PIU1 500 aa16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 ARRDC4Q8NCT1 418 aa16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 TRPV1Q8NER1 839 aa16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 TBC1D5Q92609 795 aa16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 GPKOWQ92917 476 aaPredicted RBP eCLIP16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 PHKBQ93100 1093 aa16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 TAAR1Q96RJ0 339 aa16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 LLPHQ9BRT6 129 aaKnown RBP16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 C6orf50Q9HD87 102 aa16.05■□□□□ 0.16
PKNOX1-209ENST00000560448 LRRC37A2A6NM11 1700 aa16.04■□□□□ 0.16
PKNOX1-209ENST00000560448 hCG_1642624A0A1W2PR95 340 aa16.04■□□□□ 0.16
PKNOX1-209ENST00000560448 SMCO2A6NFE2 343 aa16.04■□□□□ 0.16
PKNOX1-209ENST00000560448 MYCP01106 439 aaPredicted RBP16.04■□□□□ 0.16
PKNOX1-209ENST00000560448 TFRCP02786 760 aaKnown RBP16.04■□□□□ 0.16
PKNOX1-209ENST00000560448 NR3C2P08235 984 aa16.04■□□□□ 0.16
PKNOX1-209ENST00000560448 HOXA13P31271 388 aaPredicted RBP16.04■□□□□ 0.16
PKNOX1-209ENST00000560448 SCFD2Q8WU76 684 aa16.04■□□□□ 0.16
PKNOX1-209ENST00000560448 PDCD2LQ9BRP1 358 aa16.04■□□□□ 0.16
PKNOX1-209ENST00000560448 SPC25Q9HBM1 224 aa16.04■□□□□ 0.16
PKNOX1-209ENST00000560448 COL20A1Q9P218 1284 aa16.04■□□□□ 0.16
PKNOX1-209ENST00000560448 MCM3APO60318 1980 aa16.04■□□□□ 0.16
PKNOX1-209ENST00000560448 RBM47A0AV96 593 aaKnown RBP16.03■□□□□ 0.16
PKNOX1-209ENST00000560448 POTEFA5A3E0 1075 aa16.03■□□□□ 0.16
PKNOX1-209ENST00000560448 CCND2P30279 289 aa16.03■□□□□ 0.16
PKNOX1-209ENST00000560448 SOX10P56693 466 aa16.03■□□□□ 0.16
PKNOX1-209ENST00000560448 NKX3-2P78367 333 aa16.03■□□□□ 0.16
PKNOX1-209ENST00000560448 PGM5Q15124 567 aa16.03■□□□□ 0.16
PKNOX1-209ENST00000560448 CCDC144BQ3MJ40 725 aa16.03■□□□□ 0.16
PKNOX1-209ENST00000560448 FCHSD1Q86WN1 690 aa16.03■□□□□ 0.16
PKNOX1-209ENST00000560448 LARP6Q9BRS8 491 aaKnown RBP16.03■□□□□ 0.16
PKNOX1-209ENST00000560448 FRMPD3Q5JV73 1810 aa16.03■□□□□ 0.16
PKNOX1-209ENST00000560448 DNM1LO00429 736 aa16.02■□□□□ 0.16
PKNOX1-209ENST00000560448 TGFB3P10600 412 aa16.02■□□□□ 0.16
PKNOX1-209ENST00000560448 EIF2AK2P19525 551 aaKnown RBP16.02■□□□□ 0.16
PKNOX1-209ENST00000560448 HMGN5P82970 282 aaKnown RBP16.02■□□□□ 0.16
PKNOX1-209ENST00000560448 TTLL4Q14679 1199 aa16.02■□□□□ 0.16
PKNOX1-209ENST00000560448 GNPTABQ3T906 1256 aa16.02■□□□□ 0.16
PKNOX1-209ENST00000560448 PRAMEF19Q5SWL8 479 aa16.02■□□□□ 0.16
PKNOX1-209ENST00000560448 PCNX4Q63HM2 1172 aa16.02■□□□□ 0.16
PKNOX1-209ENST00000560448 RNF180Q86T96 592 aa16.02■□□□□ 0.16
PKNOX1-209ENST00000560448 VSIG10LQ86VR7 867 aa16.02■□□□□ 0.16
PKNOX1-209ENST00000560448 PURBQ96QR8 312 aaKnown RBP16.02■□□□□ 0.16
PKNOX1-209ENST00000560448 CST5P28325 142 aaPredicted RBP16.02■□□□□ 0.15
PKNOX1-209ENST00000560448 CLK2P49760 499 aaKnown RBP16.02■□□□□ 0.15
PKNOX1-209ENST00000560448 TNFAIP2Q03169 654 aa16.02■□□□□ 0.15
PKNOX1-209ENST00000560448 DUSP28Q4G0W2 176 aa16.02■□□□□ 0.15
PKNOX1-209ENST00000560448 TYW1BQ6NUM6 668 aa16.02■□□□□ 0.15
PKNOX1-209ENST00000560448 TAPT1Q6NXT6 567 aa16.02■□□□□ 0.15
PKNOX1-209ENST00000560448 USP17L6PQ6QN14 398 aa16.02■□□□□ 0.15
PKNOX1-209ENST00000560448 FBXO16Q8IX29 292 aaPredicted RBP16.02■□□□□ 0.15
PKNOX1-209ENST00000560448 SHISA4Q96DD7 197 aa16.02■□□□□ 0.15
PKNOX1-209ENST00000560448 CDHR1Q96JP9 859 aa16.02■□□□□ 0.15
PKNOX1-209ENST00000560448 XPNPEP3Q9NQH7 507 aa16.02■□□□□ 0.15
PKNOX1-209ENST00000560448 MAFGO15525 162 aa16.01■□□□□ 0.15
PKNOX1-209ENST00000560448 EN2P19622 333 aaPredicted RBP16.01■□□□□ 0.15
PKNOX1-209ENST00000560448 KCNA4P22459 653 aa16.01■□□□□ 0.15
PKNOX1-209ENST00000560448 GJA9P57773 515 aa16.01■□□□□ 0.15
PKNOX1-209ENST00000560448 NECAB2Q7Z6G3 386 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms