RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 NECAB1Q8N987 351 aa13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 FAM184AQ8NB25 1140 aa13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 NSUN7Q8NE18 718 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 GPKOWQ92917 476 aaPredicted RBP eCLIP13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 FRMPD4Q14CM0 1322 aa13.82□□□□□ -0.2
RABGGTA-215ENST00000560207 SOWAHBA6NEL2 793 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 MEIS2O14770 477 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 NKRFO15226 690 aaKnown RBP eCLIP13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 MAFGO15525 162 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 SEPT4O43236 478 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 GJB1P08034 283 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 CCND2P30279 289 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 NLRP5P59047 1200 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 CACNB2Q08289 660 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 CCL14Q16627 93 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 IQSEC1Q6DN90 963 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 CCDC83Q8IWF9 413 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 DAGLBQ8NCG7 672 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 INTS4Q96HW7 963 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 CDHR1Q96JP9 859 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 PXMP2Q9NR77 195 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 FAM184BQ9ULE4 1060 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 LRRC37A2A6NM11 1700 aa13.81□□□□□ -0.2
RABGGTA-215ENST00000560207 FRMPD3Q5JV73 1810 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 hCG_1642624A0A1W2PR95 340 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 K7ELQ4 463 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 LARGE1O95461 756 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 CTDNEP1O95476 244 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 NR3C2P08235 984 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 TGFB3P10600 412 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 CYBAP13498 195 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 AKR1A1P14550 325 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 PDCP20941 246 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 ACVR2BQ13705 512 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 SAFBQ15424 915 aaKnown RBP eCLIP13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 GNPTABQ3T906 1256 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 PCNX4Q63HM2 1172 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 VSIG10LQ86VR7 867 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 HSCBQ8IWL3 235 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 SH3TC2Q8TF17 1288 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 ABHD8Q96I13 439 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 TAAR1Q96RJ0 339 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 NAP1L4Q99733 375 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 PDCD2LQ9BRP1 358 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 ALG1Q9BT22 464 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 RNF208Q9H0X6 261 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 PAK6Q9NQU5 681 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 FLRT1Q9NZU1 646 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 PCDHA4Q9UN74 947 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 Q9Y3F1 56 aa13.8□□□□□ -0.2
RABGGTA-215ENST00000560207 SNAI1O95863 264 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 CCL5P13501 91 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 HOXA13P31271 388 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 CYP2C19P33261 490 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 CLK2P49760 499 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 CUL4AQ13619 759 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 PGM5Q15124 567 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 USP17L6PQ6QN14 398 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 FCHSD1Q86WN1 690 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 BLIDQ8IZY5 108 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 ANKLE1Q8NAG6 615 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 SCFD2Q8WU76 684 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 TBC1D5Q92609 795 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 FGD4Q96M96 766 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 SPC25Q9HBM1 224 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 VPS54Q9P1Q0 977 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 MYH7BA7E2Y1 1941 aa13.79□□□□□ -0.2
RABGGTA-215ENST00000560207 KIAA0100Q14667 2235 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 RBM47A0AV96 593 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 RARBP10826 455 aa13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 CNGA1P29973 690 aa13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 TTLL4Q14679 1199 aa13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 KRT25Q7Z3Z0 450 aa13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 NLRX1Q86UT6 975 aa13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 ARRDC4Q8NCT1 418 aa13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 GIMAP8Q8ND71 665 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 PHF20Q9BVI0 1012 aa13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 COL20A1Q9P218 1284 aa13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 DDX20Q9UHI6 824 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 PCDHA6Q9UN73 950 aa13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 SMC3Q9UQE7 1217 aa13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 PCDHA8Q9Y5H6 950 aa13.78□□□□□ -0.2
RABGGTA-215ENST00000560207 DUSP11O75319 330 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 SGPL1O95470 568 aa13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 ZNF865P0CJ78 1059 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 FDPSP14324 419 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 EIF2AK2P19525 551 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 SREBF1P36956 1147 aa13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 GJA8P48165 433 aa13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 USP11P51784 963 aa13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 BECN1Q14457 450 aa13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 BRDTQ58F21 947 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 TYW1BQ6NUM6 668 aa13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 NIPA1Q7RTP0 329 aa13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 C8orf76Q96K31 380 aa13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 ANO3Q9BYT9 981 aa13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 ZHX1Q9UKY1 873 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-215ENST00000560207 ASTN1O14525 1302 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms