RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 LZTS2Q9BRK4 669 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 RIOX1Q9H6W3 641 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 GPHNQ9NQX3 736 aaPredicted RBP12.53□□□□□ -0.4
XRCC3-216ENST00000556682 POLR3EQ9NVU0 708 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 TAF6LQ9Y6J9 622 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 TRIOBPQ9H2D6 2365 aa12.53□□□□□ -0.4
XRCC3-216ENST00000556682 PNMA6FA0A0J9YX94 578 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 SOX1O00570 391 aaPredicted RBP12.52□□□□□ -0.41
XRCC3-216ENST00000556682 PRC1O43663 620 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 KPNA6O60684 536 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 ABCB7O75027 752 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 CDC45O75419 566 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 CALM1P0DP23 149 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 CALM2P0DP24 149 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 CALM3P0DP25 149 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 TXNP10599 105 aaKnown RBP12.52□□□□□ -0.41
XRCC3-216ENST00000556682 ANTXR2P58335 489 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
XRCC3-216ENST00000556682 ITGA7Q13683 1181 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 NECTIN1Q15223 517 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 OR6J1Q8NGC5 347 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 TBC1D5Q92609 795 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 TAAR1Q96RJ0 339 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 PIGSQ96S52 555 aa12.52□□□□□ -0.41
XRCC3-216ENST00000556682 GCOM1H8Y6P7 765 aaPredicted RBP12.51□□□□□ -0.41
XRCC3-216ENST00000556682 EIF3JO75822 258 aaKnown RBP12.51□□□□□ -0.41
XRCC3-216ENST00000556682 TIMP1P01033 207 aa12.51□□□□□ -0.41
XRCC3-216ENST00000556682 POLR2MP0CAP2 368 aa12.51□□□□□ -0.41
XRCC3-216ENST00000556682 SMARCA1P28370 1054 aa12.51□□□□□ -0.41
XRCC3-216ENST00000556682 LIFRP42702 1097 aa12.51□□□□□ -0.41
XRCC3-216ENST00000556682 FPGSQ05932 587 aa12.51□□□□□ -0.41
XRCC3-216ENST00000556682 SYNE3Q6ZMZ3 975 aa12.51□□□□□ -0.41
XRCC3-216ENST00000556682 SEPT14Q6ZU15 432 aa12.51□□□□□ -0.41
XRCC3-216ENST00000556682 ZNF654Q8IZM8 581 aa12.51□□□□□ -0.41
XRCC3-216ENST00000556682 RRP36Q96EU6 259 aaKnown RBP12.51□□□□□ -0.41
XRCC3-216ENST00000556682 LRCH3Q96II8 777 aa12.51□□□□□ -0.41
XRCC3-216ENST00000556682 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
XRCC3-216ENST00000556682 SENP2Q9HC62 589 aa12.51□□□□□ -0.41
XRCC3-216ENST00000556682 NR3C2P08235 984 aa12.5□□□□□ -0.41
XRCC3-216ENST00000556682 MYL3P08590 195 aa12.5□□□□□ -0.41
XRCC3-216ENST00000556682 HSD17B4P51659 736 aa12.5□□□□□ -0.41
XRCC3-216ENST00000556682 GHRHRQ02643 423 aa12.5□□□□□ -0.41
XRCC3-216ENST00000556682 FAM126BQ8IXS8 530 aa12.5□□□□□ -0.41
XRCC3-216ENST00000556682 TMEM199Q8N511 208 aa12.5□□□□□ -0.41
XRCC3-216ENST00000556682 SLC43A3Q8NBI5 491 aa12.5□□□□□ -0.41
XRCC3-216ENST00000556682 NEK1Q96PY6 1258 aa12.5□□□□□ -0.41
XRCC3-216ENST00000556682 MTG1Q9BT17 334 aaPredicted RBP12.5□□□□□ -0.41
XRCC3-216ENST00000556682 PXMP2Q9NR77 195 aa12.5□□□□□ -0.41
XRCC3-216ENST00000556682 COL20A1Q9P218 1284 aa12.5□□□□□ -0.41
XRCC3-216ENST00000556682 SEC63Q9UGP8 760 aaKnown RBP12.5□□□□□ -0.41
XRCC3-216ENST00000556682 TBX21Q9UL17 535 aa12.5□□□□□ -0.41
XRCC3-216ENST00000556682 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
XRCC3-216ENST00000556682 SH2B2O14492 632 aaPredicted RBP12.49□□□□□ -0.41
XRCC3-216ENST00000556682 CYTH3O43739 400 aa12.49□□□□□ -0.41
XRCC3-216ENST00000556682 PPP1R11O60927 126 aaPredicted RBP12.49□□□□□ -0.41
XRCC3-216ENST00000556682 GH1P01241 217 aa12.49□□□□□ -0.41
XRCC3-216ENST00000556682 SUPT20HL2P0C7V6 817 aa12.49□□□□□ -0.41
XRCC3-216ENST00000556682 EIF2AK2P19525 551 aaKnown RBP12.49□□□□□ -0.41
XRCC3-216ENST00000556682 ITGB8P26012 769 aa12.49□□□□□ -0.41
XRCC3-216ENST00000556682 PPIGQ13427 754 aaKnown RBP eCLIP12.49□□□□□ -0.412e-9■□□□□ 9.2
XRCC3-216ENST00000556682 KRT32Q14532 448 aa12.49□□□□□ -0.41
XRCC3-216ENST00000556682 SHHQ15465 462 aa12.49□□□□□ -0.41
XRCC3-216ENST00000556682 TMEM63BQ5T3F8 832 aa12.49□□□□□ -0.41
XRCC3-216ENST00000556682 MFSD5Q6N075 450 aa12.49□□□□□ -0.41
XRCC3-216ENST00000556682 KCNV1Q6PIU1 500 aa12.49□□□□□ -0.41
XRCC3-216ENST00000556682 CUL5Q93034 780 aa12.49□□□□□ -0.41
XRCC3-216ENST00000556682 SPZ1Q9BXG8 430 aa12.49□□□□□ -0.41
XRCC3-216ENST00000556682 A6NJR5 290 aa12.48□□□□□ -0.41
XRCC3-216ENST00000556682 CD4P01730 458 aa12.48□□□□□ -0.41
XRCC3-216ENST00000556682 HMGB1P09429 215 aaKnown RBP12.48□□□□□ -0.41
XRCC3-216ENST00000556682 MYCLP12524 364 aaPredicted RBP12.48□□□□□ -0.41
XRCC3-216ENST00000556682 PTGS1P23219 599 aa12.48□□□□□ -0.41
XRCC3-216ENST00000556682 HOXA13P31271 388 aaPredicted RBP12.48□□□□□ -0.41
XRCC3-216ENST00000556682 PURAQ00577 322 aaKnown RBP12.48□□□□□ -0.41
XRCC3-216ENST00000556682 CCDC62Q6P9F0 684 aa12.48□□□□□ -0.41
XRCC3-216ENST00000556682 SKAP1Q86WV1 359 aa12.48□□□□□ -0.41
XRCC3-216ENST00000556682 DEFB123Q8N688 67 aa12.48□□□□□ -0.41
XRCC3-216ENST00000556682 RNPC3Q96LT9 517 aaKnown RBP12.48□□□□□ -0.41
XRCC3-216ENST00000556682 MYL10Q9BUA6 226 aa12.48□□□□□ -0.41
XRCC3-216ENST00000556682 MRVI1Q9Y6F6 885 aa12.48□□□□□ -0.41
XRCC3-216ENST00000556682 MCM3APO60318 1980 aa12.48□□□□□ -0.41
XRCC3-216ENST00000556682 OPLAHO14841 1288 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 CASTP20810 708 aaKnown RBP12.47□□□□□ -0.41
XRCC3-216ENST00000556682 CCND2P30279 289 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 PSMC6P62333 389 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 LAMC2Q13753 1193 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 LY6KQ17RY6 165 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 SLC35G1Q2M3R5 365 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 TSGA10IPQ3SY00 556 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 C9orf50Q5SZB4 431 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 DHX32Q7L7V1 743 aaKnown RBP12.47□□□□□ -0.41
XRCC3-216ENST00000556682 SGMS1Q86VZ5 419 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 FCHSD1Q86WN1 690 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 FANCBQ8NB91 859 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 PIBF1Q8WXW3 757 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 COPS5Q92905 334 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 PDCD2LQ9BRP1 358 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 PPP1R12CQ9BZL4 782 aa12.47□□□□□ -0.41
XRCC3-216ENST00000556682 ALDH8A1Q9H2A2 487 aaPredicted RBP12.47□□□□□ -0.41
XRCC3-216ENST00000556682 HIPK3Q9H422 1215 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms