RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ARHGAP4P98171 946 aa16.34■□□□□ 0.21
SHOX2-206ENST00000554685 CEBPZQ03701 1054 aaKnown RBP16.34■□□□□ 0.21
SHOX2-206ENST00000554685 BAATQ14032 418 aaPredicted RBP16.34■□□□□ 0.21
SHOX2-206ENST00000554685 SLC39A14Q15043 492 aa16.34■□□□□ 0.21
SHOX2-206ENST00000554685 NFKBIBQ15653 356 aa16.34■□□□□ 0.21
SHOX2-206ENST00000554685 ANKRD35Q8N283 1001 aa16.34■□□□□ 0.21
SHOX2-206ENST00000554685 TBC1D5Q92609 795 aa16.34■□□□□ 0.21
SHOX2-206ENST00000554685 PGBD1Q96JS3 809 aa16.34■□□□□ 0.21
SHOX2-206ENST00000554685 A1CFQ9NQ94 594 aaKnown RBP16.34■□□□□ 0.21
SHOX2-206ENST00000554685 PCDHB6Q9Y5E3 794 aa16.34■□□□□ 0.21
SHOX2-206ENST00000554685 GOLGA6L4A6NEF3 574 aa16.33■□□□□ 0.2
SHOX2-206ENST00000554685 B4DLN1 442 aa16.33■□□□□ 0.2
SHOX2-206ENST00000554685 CCNT1O60563 726 aaKnown RBP16.33■□□□□ 0.2
SHOX2-206ENST00000554685 CYP3A4P08684 503 aa16.33■□□□□ 0.2
SHOX2-206ENST00000554685 MAP2K2P36507 400 aa16.33■□□□□ 0.2
SHOX2-206ENST00000554685 KCTD2Q14681 263 aa16.33■□□□□ 0.2
SHOX2-206ENST00000554685 ZNF174Q15697 407 aa16.33■□□□□ 0.2
SHOX2-206ENST00000554685 PPP4R3AQ6IN85 833 aa16.33■□□□□ 0.2
SHOX2-206ENST00000554685 XRRA1Q6P2D8 792 aa16.33■□□□□ 0.2
SHOX2-206ENST00000554685 SLC30A10Q6XR72 485 aa16.33■□□□□ 0.2
SHOX2-206ENST00000554685 CHAMP1Q96JM3 812 aa16.33■□□□□ 0.2
SHOX2-206ENST00000554685 MPHOSPH6Q99547 160 aaKnown RBP16.33■□□□□ 0.2
SHOX2-206ENST00000554685 CYP39A1Q9NYL5 469 aa16.33■□□□□ 0.2
SHOX2-206ENST00000554685 FRMPD4Q14CM0 1322 aa16.33■□□□□ 0.2
SHOX2-206ENST00000554685 ADGRA2Q96PE1 1338 aa16.33■□□□□ 0.2
SHOX2-206ENST00000554685 CA12O43570 354 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 STRNO43815 780 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 NEMFO60524 1076 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 TLR2O60603 784 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 PRPF40AO75400 957 aaKnown RBP16.32■□□□□ 0.2
SHOX2-206ENST00000554685 FCER1AP12319 257 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 MAPK4P31152 587 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 CIITAP33076 1130 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 MCM7P33993 719 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 ME1P48163 572 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 NBR1Q14596 966 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 PTPAQ15257 358 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 Q3C1V9 767 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 WDR78Q5VTH9 848 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 ARL6IP4Q66PJ3 421 aaKnown RBP16.32■□□□□ 0.2
SHOX2-206ENST00000554685 ABRAQ8N0Z2 381 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 RPTORQ8N122 1335 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 DNERQ8NFT8 737 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 NSUN6Q8TEA1 469 aaKnown RBP16.32■□□□□ 0.2
SHOX2-206ENST00000554685 RMDN3Q96TC7 470 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 MMP19Q99542 508 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 FTOQ9C0B1 505 aaKnown RBP eCLIP16.32■□□□□ 0.2
SHOX2-206ENST00000554685 GDPD2Q9HCC8 539 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 ADD3Q9UEY8 706 aaKnown RBP16.32■□□□□ 0.2
SHOX2-206ENST00000554685 IVNS1ABPQ9Y6Y0 642 aa16.32■□□□□ 0.2
SHOX2-206ENST00000554685 CYP3A7-CYP3A51PA0A087WV96 503 aa16.31■□□□□ 0.2
SHOX2-206ENST00000554685 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
SHOX2-206ENST00000554685 BCRP11274 1271 aa16.31■□□□□ 0.2
SHOX2-206ENST00000554685 CYP3A7P24462 503 aa16.31■□□□□ 0.2
SHOX2-206ENST00000554685 ZNF76P36508 570 aa16.31■□□□□ 0.2
SHOX2-206ENST00000554685 UBE2HP62256 183 aa16.31■□□□□ 0.2
SHOX2-206ENST00000554685 ATP2C1P98194 919 aaPredicted RBP16.31■□□□□ 0.2
SHOX2-206ENST00000554685 ARHGEF16Q5VV41 709 aa16.31■□□□□ 0.2
SHOX2-206ENST00000554685 KRI1Q8N9T8 703 aaKnown RBP16.31■□□□□ 0.2
SHOX2-206ENST00000554685 CRYGNQ8WXF5 182 aa16.31■□□□□ 0.2
SHOX2-206ENST00000554685 FERMT2Q96AC1 680 aa16.31■□□□□ 0.2
SHOX2-206ENST00000554685 LOC102724159A0A0B4J2E5 919 aa16.3■□□□□ 0.2
SHOX2-206ENST00000554685 AOC2O75106 756 aa16.3■□□□□ 0.2
SHOX2-206ENST00000554685 PRPHP41219 470 aa16.3■□□□□ 0.2
SHOX2-206ENST00000554685 PTGDRQ13258 359 aa16.3■□□□□ 0.2
SHOX2-206ENST00000554685 PWP2Q15269 919 aaKnown RBP16.3■□□□□ 0.2
SHOX2-206ENST00000554685 PCNX4Q63HM2 1172 aa16.3■□□□□ 0.2
SHOX2-206ENST00000554685 MBOAT7Q96N66 472 aa16.3■□□□□ 0.2
SHOX2-206ENST00000554685 TAAR1Q96RJ0 339 aa16.3■□□□□ 0.2
SHOX2-206ENST00000554685 IWS1Q96ST2 819 aa16.3■□□□□ 0.2
SHOX2-206ENST00000554685 PXMP2Q9NR77 195 aa16.3■□□□□ 0.2
SHOX2-206ENST00000554685 LMBRD1Q9NUN5 540 aa16.3■□□□□ 0.2
SHOX2-206ENST00000554685 COL20A1Q9P218 1284 aa16.3■□□□□ 0.2
SHOX2-206ENST00000554685 DDX25Q9UHL0 483 aaKnown RBP16.3■□□□□ 0.2
SHOX2-206ENST00000554685 CPA4Q9UI42 421 aa16.3■□□□□ 0.2
SHOX2-206ENST00000554685 TBX3O15119 743 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 PEX10O60683 326 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 CUTAO60888 179 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 STAM2O75886 525 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 MBD3O95983 291 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 OR52Z1P0C646 297 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 CCND2P30279 289 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 SETQ01105 290 aaPredicted RBP16.29■□□□□ 0.2
SHOX2-206ENST00000554685 SKOR2Q2VWA4 1001 aaPredicted RBP16.29■□□□□ 0.2
SHOX2-206ENST00000554685 Q4G0T1 1027 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 ADALQ6DHV7 355 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 C17orf99Q6UX52 265 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 NIPA1Q7RTP0 329 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 PORCNQ9H237 461 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 EFCC1Q9HA90 598 aa16.29■□□□□ 0.2
SHOX2-206ENST00000554685 A0A1W2PQ27 194 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 A0A1W2PQ64 194 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 A0A1W2PQD8 194 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 WNT7AO00755 349 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 MARCH6O60337 910 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 TDP2O95551 362 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 EIF2AK2P19525 551 aaKnown RBP16.28■□□□□ 0.2
SHOX2-206ENST00000554685 PTPREP23469 700 aa16.28■□□□□ 0.2
SHOX2-206ENST00000554685 MARCKSP29966 332 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms