RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 RPAINQ86UA6 219 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 CCDC24Q8N4L8 307 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 UHMK1Q8TAS1 419 aaKnown RBP15.21■□□□□ 0.03
VTI1B-204ENST00000554659 H0YIN7 160 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 AFPP02771 609 aaKnown RBP15.21■□□□□ 0.03
VTI1B-204ENST00000554659 PDE6BP35913 854 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 BPIFB4P59827 614 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 IFT88Q13099 833 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 RBBP5Q15291 538 aaKnown RBP15.21■□□□□ 0.03
VTI1B-204ENST00000554659 ASPRV1Q53RT3 343 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 XKR9Q5GH70 373 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 ALS2CLQ60I27 953 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 PLA2G4DQ86XP0 818 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 GJA10Q969M2 543 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 PBKQ96KB5 322 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 A0A087WWV3 80 aa15.21■□□□□ 0.02
VTI1B-204ENST00000554659 COBLO75128 1261 aa15.21■□□□□ 0.02
VTI1B-204ENST00000554659 GAP43P17677 238 aa15.21■□□□□ 0.02
VTI1B-204ENST00000554659 POLR2BP30876 1174 aaKnown RBP15.21■□□□□ 0.02
VTI1B-204ENST00000554659 MFAP3P55082 362 aa15.21■□□□□ 0.02
VTI1B-204ENST00000554659 GABPAQ06546 454 aa15.21■□□□□ 0.02
VTI1B-204ENST00000554659 C10orf76Q5T2E6 689 aa15.21■□□□□ 0.02
VTI1B-204ENST00000554659 NAA35Q5VZE5 725 aa15.21■□□□□ 0.02
VTI1B-204ENST00000554659 GRAMD1CQ8IYS0 662 aa15.21■□□□□ 0.02
VTI1B-204ENST00000554659 MAGOHBQ96A72 148 aaKnown RBP15.21■□□□□ 0.02
VTI1B-204ENST00000554659 EFCC1Q9HA90 598 aa15.21■□□□□ 0.02
VTI1B-204ENST00000554659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.21■□□□□ 0.02
VTI1B-204ENST00000554659 CLEC11AQ9Y240 323 aa15.21■□□□□ 0.02
VTI1B-204ENST00000554659 WDR46O15213 610 aaKnown RBP15.2■□□□□ 0.02
VTI1B-204ENST00000554659 NDUFA10O95299 355 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 GCFC2P16383 781 aaKnown RBP15.2■□□□□ 0.02
VTI1B-204ENST00000554659 LRCH2Q5VUJ6 765 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 SLC17A8Q8NDX2 589 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 PNMA2Q9UL42 364 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 CUL4BQ13620 913 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 FBXO38Q6PIJ6 1188 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 CNOT10Q9H9A5 744 aaKnown RBP15.2■□□□□ 0.02
VTI1B-204ENST00000554659 ST7Q9NRC1 585 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 ZNF148Q9UQR1 794 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 KDM6BO15054 1643 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 NEO1Q92859 1461 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 PRPF3O43395 683 aaKnown RBP15.2■□□□□ 0.02
VTI1B-204ENST00000554659 CCNE1P24864 410 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 LIFRP42702 1097 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 C2orf54Q08AI8 447 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 DLGAP5Q15398 846 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 DBN1Q16643 649 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 GPATCH4Q5T3I0 446 aaKnown RBP15.2■□□□□ 0.02
VTI1B-204ENST00000554659 LARGE2Q8N3Y3 721 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 TRIM11Q96F44 468 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 HINFPQ9BQA5 517 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 Q9H521 79 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 HSPA6P17066 643 aa15.2■□□□□ 0.02
VTI1B-204ENST00000554659 PSMC2P35998 433 aaKnown RBP15.2■□□□□ 0.02
VTI1B-204ENST00000554659 NHEJ1Q9H9Q4 299 aaPredicted RBP15.2■□□□□ 0.02
VTI1B-204ENST00000554659 PLEKHG1Q9ULL1 1385 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 TNNC2P02585 160 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 RNASELQ05823 741 aaKnown RBP15.19■□□□□ 0.02
VTI1B-204ENST00000554659 DMP1Q13316 513 aaPredicted RBP15.19■□□□□ 0.02
VTI1B-204ENST00000554659 MCF2L2Q86YR7 1114 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 ZBTB8OSQ8IWT0 167 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 EEF2KMTQ96G04 330 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 TRIM4Q9C037 500 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 PCDHA1Q9Y5I3 950 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 PPFIA2O75334 1257 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 ICA1Q05084 483 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 CASP8Q14790 479 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 CERKLQ49MI3 558 aaPredicted RBP15.19■□□□□ 0.02
VTI1B-204ENST00000554659 NXNQ6DKJ4 435 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 CAPN12Q6ZSI9 719 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 XAB2Q9HCS7 855 aaKnown RBP15.19■□□□□ 0.02
VTI1B-204ENST00000554659 LRRD1A4D1F6 860 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 ZMYND10O75800 440 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 CCDC93Q567U6 631 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 OSBP2Q969R2 916 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 GINS2Q9Y248 185 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 EIF3CLB5ME19 914 aaKnown RBP15.19■□□□□ 0.02
VTI1B-204ENST00000554659 PNMA6AP0CW24 399 aaPredicted RBP15.19■□□□□ 0.02
VTI1B-204ENST00000554659 MX2P20592 715 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 PTK2Q05397 1052 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 NR5A1Q13285 461 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 SEPT2Q15019 361 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 ODR4Q5SWX8 454 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 ARHGEF16Q5VV41 709 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 SLFN13Q68D06 897 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 PAGE5Q96GU1 130 aa15.19■□□□□ 0.02
VTI1B-204ENST00000554659 EIF3CQ99613 913 aaKnown RBP15.19■□□□□ 0.02
VTI1B-204ENST00000554659 TESPA1A2RU30 521 aaPredicted RBP15.18■□□□□ 0.02
VTI1B-204ENST00000554659 MYO1FO00160 1098 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 MESDQ14696 234 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 CXorf38Q8TB03 319 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 ARHGAP31Q2M1Z3 1444 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 RPSAP08865 295 aaKnown RBP15.18■□□□□ 0.02
VTI1B-204ENST00000554659 PTPN12Q05209 780 aaKnown RBP15.18■□□□□ 0.02
VTI1B-204ENST00000554659 PTPN21Q16825 1174 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 HVCN1Q96D96 273 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 PPP1R9AQ9ULJ8 1098 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 GJA3Q9Y6H8 435 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 PFDN1O60925 122 aa15.18■□□□□ 0.02
VTI1B-204ENST00000554659 PSMD2Q13200 908 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms