RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 RANBP2P49792 3224 aaKnown RBP16.09■□□□□ 0.17
CACNB3-216ENST00000550391 GOLGA6L22H0YM25 854 aa16.09■□□□□ 0.17
CACNB3-216ENST00000550391 SLC25A27O95847 323 aa16.09■□□□□ 0.17
CACNB3-216ENST00000550391 HOXA13P31271 388 aaPredicted RBP16.09■□□□□ 0.17
CACNB3-216ENST00000550391 ERVK-9P63128 1117 aa16.09■□□□□ 0.17
CACNB3-216ENST00000550391 ERVK-24P63145 666 aa16.09■□□□□ 0.17
CACNB3-216ENST00000550391 CSPP1Q1MSJ5 1256 aa16.09■□□□□ 0.17
CACNB3-216ENST00000550391 OTOP1Q7RTM1 612 aa16.09■□□□□ 0.17
CACNB3-216ENST00000550391 PGBD1Q96JS3 809 aa16.09■□□□□ 0.17
CACNB3-216ENST00000550391 USP28Q96RU2 1077 aa16.09■□□□□ 0.17
CACNB3-216ENST00000550391 FBXO40Q9UH90 709 aa16.09■□□□□ 0.17
CACNB3-216ENST00000550391 SPDYE3A6NKU9 549 aa16.08■□□□□ 0.16
CACNB3-216ENST00000550391 MCM4P33991 863 aa16.08■□□□□ 0.16
CACNB3-216ENST00000550391 TAF1CQ15572 869 aaPredicted RBP16.08■□□□□ 0.16
CACNB3-216ENST00000550391 INF2Q27J81 1249 aa16.08■□□□□ 0.16
CACNB3-216ENST00000550391 ANO1Q5XXA6 986 aa16.08■□□□□ 0.16
CACNB3-216ENST00000550391 RNF207Q6ZRF8 634 aa16.08■□□□□ 0.16
CACNB3-216ENST00000550391 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.08■□□□□ 0.16
CACNB3-216ENST00000550391 ANKRD13CQ8N6S4 541 aa16.08■□□□□ 0.16
CACNB3-216ENST00000550391 SHCBP1Q8NEM2 672 aa16.08■□□□□ 0.16
CACNB3-216ENST00000550391 GPRC5AQ8NFJ5 357 aa16.08■□□□□ 0.16
CACNB3-216ENST00000550391 TBCKQ8TEA7 893 aa16.08■□□□□ 0.16
CACNB3-216ENST00000550391 ANO3Q9BYT9 981 aa16.08■□□□□ 0.16
CACNB3-216ENST00000550391 FTOQ9C0B1 505 aaKnown RBP eCLIP16.08■□□□□ 0.16
CACNB3-216ENST00000550391 POLR3EQ9NVU0 708 aa16.08■□□□□ 0.16
CACNB3-216ENST00000550391 PTPN22Q9Y2R2 807 aa16.08■□□□□ 0.16
CACNB3-216ENST00000550391 CLIC4Q9Y696 253 aa16.08■□□□□ 0.16
CACNB3-216ENST00000550391 WNT7AO00755 349 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 FIBPO43427 364 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 EDIL3O43854 480 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 YEATS4O95619 227 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 ERCC3P19447 782 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 ATP2B1P20020 1258 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 NASPP49321 788 aaPredicted RBP16.07■□□□□ 0.16
CACNB3-216ENST00000550391 RPS6P62753 249 aaKnown RBP16.07■□□□□ 0.16
CACNB3-216ENST00000550391 CEBPZQ03701 1054 aaKnown RBP16.07■□□□□ 0.16
CACNB3-216ENST00000550391 NBR1Q14596 966 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 TTC38Q5R3I4 469 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 NSMFQ6X4W1 530 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 SLC30A10Q6XR72 485 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 NEK8Q86SG6 692 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 FCHSD1Q86WN1 690 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 NCAPG2Q86XI2 1143 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 SYTL5Q8TDW5 730 aaPredicted RBP16.07■□□□□ 0.16
CACNB3-216ENST00000550391 CRYGNQ8WXF5 182 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 SPATA32Q96LK8 384 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 EHMT1Q9H9B1 1298 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 A1CFQ9NQ94 594 aaKnown RBP16.07■□□□□ 0.16
CACNB3-216ENST00000550391 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.07■□□□□ 0.16
CACNB3-216ENST00000550391 COL20A1Q9P218 1284 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 RCOR1Q9UKL0 485 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 PCDHB6Q9Y5E3 794 aa16.07■□□□□ 0.16
CACNB3-216ENST00000550391 MYH7BA7E2Y1 1941 aa16.06■□□□□ 0.16
CACNB3-216ENST00000550391 DDX11L8A8MPP1 907 aa16.06■□□□□ 0.16
CACNB3-216ENST00000550391 CCNA1P78396 465 aa16.06■□□□□ 0.16
CACNB3-216ENST00000550391 BAATQ14032 418 aaPredicted RBP16.06■□□□□ 0.16
CACNB3-216ENST00000550391 STK38Q15208 465 aa16.06■□□□□ 0.16
CACNB3-216ENST00000550391 SF3A1Q15459 793 aaKnown RBP16.06■□□□□ 0.16
CACNB3-216ENST00000550391 FAM110CQ1W6H9 321 aa16.06■□□□□ 0.16
CACNB3-216ENST00000550391 TMEM87AQ8NBN3 555 aa16.06■□□□□ 0.16
CACNB3-216ENST00000550391 LEO1Q8WVC0 666 aaPredicted RBP16.06■□□□□ 0.16
CACNB3-216ENST00000550391 R3HDMLQ9H3Y0 253 aa16.06■□□□□ 0.16
CACNB3-216ENST00000550391 MROH8Q9H579 483 aa16.06■□□□□ 0.16
CACNB3-216ENST00000550391 GDPD2Q9HCC8 539 aa16.06■□□□□ 0.16
CACNB3-216ENST00000550391 CYP39A1Q9NYL5 469 aa16.06■□□□□ 0.16
CACNB3-216ENST00000550391 CEP131Q9UPN4 1083 aa16.06■□□□□ 0.16
CACNB3-216ENST00000550391 RPTORQ8N122 1335 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 TLR2O60603 784 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 BMP15O95972 392 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 BCRP11274 1271 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 SREBF1P36956 1147 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 USP11P51784 963 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 SLC39A14Q15043 492 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 PTPAQ15257 358 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 NFKBIBQ15653 356 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 ZNF174Q15697 407 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 LINC00301Q8NCQ3 95 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 KCNG4Q8TDN1 519 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 ERO1AQ96HE7 468 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 NAP1L4Q99733 375 aaKnown RBP16.05■□□□□ 0.16
CACNB3-216ENST00000550391 PORCNQ9H237 461 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 ZFYVE28Q9HCC9 887 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 LCTP09848 1927 aa16.05■□□□□ 0.16
CACNB3-216ENST00000550391 PFASO15067 1338 aa16.04■□□□□ 0.16
CACNB3-216ENST00000550391 ELP1O95163 1332 aa16.04■□□□□ 0.16
CACNB3-216ENST00000550391 FRMPD4Q14CM0 1322 aa16.04■□□□□ 0.16
CACNB3-216ENST00000550391 A0A1W2PPC1 479 aa16.04■□□□□ 0.16
CACNB3-216ENST00000550391 PRPF40AO75400 957 aaKnown RBP16.04■□□□□ 0.16
CACNB3-216ENST00000550391 PTMSP20962 102 aa16.04■□□□□ 0.16
CACNB3-216ENST00000550391 ARHGAP4P98171 946 aa16.04■□□□□ 0.16
CACNB3-216ENST00000550391 ORC2Q13416 577 aaPredicted RBP16.04■□□□□ 0.16
CACNB3-216ENST00000550391 LETM2Q2VYF4 491 aa16.04■□□□□ 0.16
CACNB3-216ENST00000550391 C17orf99Q6UX52 265 aa16.04■□□□□ 0.16
CACNB3-216ENST00000550391 ANKRD35Q8N283 1001 aa16.04■□□□□ 0.16
CACNB3-216ENST00000550391 TAAR1Q96RJ0 339 aa16.04■□□□□ 0.16
CACNB3-216ENST00000550391 EFCC1Q9HA90 598 aa16.04■□□□□ 0.16
CACNB3-216ENST00000550391 CPA4Q9UI42 421 aa16.04■□□□□ 0.16
CACNB3-216ENST00000550391 MORC2Q9Y6X9 1032 aaPredicted RBP16.04■□□□□ 0.16
CACNB3-216ENST00000550391 SPTLC2O15270 562 aa16.03■□□□□ 0.16
CACNB3-216ENST00000550391 CCNT1O60563 726 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms