RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	MAPK4	P31152	587 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	SREBF1	P36956	1147 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	USP11	P51784	963 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	ARHGAP4	P98171	946 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	BAAT	Q14032	418 aa	Predicted RBP	13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	LETM2	Q2VYF4	491 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	EARS2	Q5JPH6	523 aa	Known RBP	13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	POTEE	Q6S8J3	1075 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	SLC30A10	Q6XR72	485 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	PGBD1	Q96JS3	809 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	MMP19	Q99542	508 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	MPHOSPH6	Q99547	160 aa	Known RBP	13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	A1CF	Q9NQ94	594 aa	Known RBP	13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	CYP39A1	Q9NYL5	469 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	ELP1	O95163	1332 aa		13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	LAD1	O00515	517 aa		13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	CCNT1	O60563	726 aa	Known RBP	13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	MCM4	P33991	863 aa		13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	MCM7	P33993	719 aa		13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	ZNF76	P36508	570 aa		13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	NOM1	Q5C9Z4	860 aa	Known RBP	13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	MOXD1	Q6UVY6	613 aa		13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	TBC1D5	Q92609	795 aa		13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	ADD3	Q9UEY8	706 aa	Known RBP	13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	CPA4	Q9UI42	421 aa		13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	PCDHB6	Q9Y5E3	794 aa		13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	CLIC4	Q9Y696	253 aa		13.21	□□□□□ -0.29
CNOT2-223	ENST00000550160	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	ADGRA2	Q96PE1	1338 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	POTEB2	H3BUK9	544 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	SPTLC2	O15270	562 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	STRN	O43815	780 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	NEMF	O60524	1076 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	PEX10	O60683	326 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	AOC2	O75106	756 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	CYP3A4	P08684	503 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	MNX1	P50219	401 aa	Predicted RBP	13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	TOB1	P50616	345 aa	Predicted RBP	13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	CRHR2	Q13324	411 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	SLC39A14	Q15043	492 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	ZNF174	Q15697	407 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160		Q3C1V9	767 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	ARHGEF16	Q5VV41	709 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	PPP4R3A	Q6IN85	833 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	XRRA1	Q6P2D8	792 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	ABRA	Q8N0Z2	381 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	TMEM87A	Q8NBN3	555 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	LINC00301	Q8NCQ3	95 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	DNER	Q8NFT8	737 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	NSUN6	Q8TEA1	469 aa	Known RBP	13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	LEO1	Q8WVC0	666 aa	Predicted RBP	13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	CHAMP1	Q96JM3	812 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	RMDN3	Q96TC7	470 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	GDPD2	Q9HCC8	539 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	RCOR1	Q9UKL0	485 aa		13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.2	□□□□□ -0.3
CNOT2-223	ENST00000550160	RPTOR	Q8N122	1335 aa		13.19	□□□□□ -0.3
CNOT2-223	ENST00000550160	MARCH6	O60337	910 aa		13.19	□□□□□ -0.3
CNOT2-223	ENST00000550160	PPP6R2	O75170	966 aa		13.19	□□□□□ -0.3
CNOT2-223	ENST00000550160	BCR	P11274	1271 aa		13.19	□□□□□ -0.3
CNOT2-223	ENST00000550160	ME1	P48163	572 aa		13.19	□□□□□ -0.3
CNOT2-223	ENST00000550160	VEGFB	P49765	207 aa		13.19	□□□□□ -0.3
CNOT2-223	ENST00000550160	NBR1	Q14596	966 aa		13.19	□□□□□ -0.3
CNOT2-223	ENST00000550160	ZIC5	Q96T25	663 aa		13.19	□□□□□ -0.3
CNOT2-223	ENST00000550160	PORCN	Q9H237	461 aa		13.19	□□□□□ -0.3
CNOT2-223	ENST00000550160	EFCC1	Q9HA90	598 aa		13.19	□□□□□ -0.3
CNOT2-223	ENST00000550160	PXMP2	Q9NR77	195 aa		13.19	□□□□□ -0.3
CNOT2-223	ENST00000550160	SLC5A4	Q9NY91	659 aa		13.19	□□□□□ -0.3
CNOT2-223	ENST00000550160	DDX25	Q9UHL0	483 aa	Known RBP	13.19	□□□□□ -0.3
CNOT2-223	ENST00000550160	FRMPD4	Q14CM0	1322 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	MYH15	Q9Y2K3	1946 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	PRPF40A	O75400	957 aa	Known RBP	13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	HSPA6	P17066	643 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	EIF2AK2	P19525	551 aa	Known RBP	13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	CCND2	P30279	289 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	CIITA	P33076	1130 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	ATP2C1	P98194	919 aa	Predicted RBP	13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	SET	Q01105	290 aa	Predicted RBP	13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	PTGDR	Q13258	359 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	PTPA	Q15257	358 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	PCNX4	Q63HM2	1172 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	C17orf99	Q6UX52	265 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	PLEKHH3	Q7Z736	793 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	CRYGN	Q8WXF5	182 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	FERMT2	Q96AC1	680 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	TAAR1	Q96RJ0	339 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	IWS1	Q96ST2	819 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	PDCD2L	Q9BRP1	358 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	COL20A1	Q9P218	1284 aa		13.18	□□□□□ -0.3
CNOT2-223	ENST00000550160	SMCHD1	A6NHR9	2005 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	LOC102724159	A0A0B4J2E5	919 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	SLC15A5	A6NIM6	579 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	STAM2	O75886	525 aa		13.17	□□□□□ -0.3
CNOT2-223	ENST00000550160	TDP2	O95551	362 aa		13.17	□□□□□ -0.3

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