RNA–Protein interactions for RNA: ENST00000548984.1

PFDN5-206, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-206ENST00000548984 EPB41L2O43491 1005 aaKnown RBP11.85□□□□□ -0.51
PFDN5-206ENST00000548984 CFBP00751 764 aa11.85□□□□□ -0.51
PFDN5-206ENST00000548984 HMGB1P09429 215 aaKnown RBP11.85□□□□□ -0.51
PFDN5-206ENST00000548984 MDM2Q00987 491 aaPredicted RBP11.85□□□□□ -0.51
PFDN5-206ENST00000548984 TTLL4Q14679 1199 aa11.85□□□□□ -0.51
PFDN5-206ENST00000548984 STXBP2Q15833 593 aa11.85□□□□□ -0.51
PFDN5-206ENST00000548984 TSGA10IPQ3SY00 556 aa11.85□□□□□ -0.51
PFDN5-206ENST00000548984 SGMS1Q86VZ5 419 aa11.85□□□□□ -0.51
PFDN5-206ENST00000548984 HOMER1Q86YM7 354 aa11.85□□□□□ -0.51
PFDN5-206ENST00000548984 PIGSQ96S52 555 aa11.85□□□□□ -0.51
PFDN5-206ENST00000548984 RMDN3Q96TC7 470 aa11.85□□□□□ -0.51
PFDN5-206ENST00000548984 SEC63Q9UGP8 760 aaKnown RBP11.85□□□□□ -0.51
PFDN5-206ENST00000548984 DDX49Q9Y6V7 483 aaKnown RBP11.85□□□□□ -0.51
PFDN5-206ENST00000548984 OPLAHO14841 1288 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 CYTH3O43739 400 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 KPNA6O60684 536 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 PPP1R11O60927 126 aaPredicted RBP11.84□□□□□ -0.51
PFDN5-206ENST00000548984 CDK7P50613 346 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 BEX3Q00994 111 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 ARHGEF16Q5VV41 709 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 GPR153Q6NV75 609 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 SYNE3Q6ZMZ3 975 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 SLC43A3Q8NBI5 491 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 OR6J1Q8NGC5 347 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 VTI1AQ96AJ9 217 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 RRP36Q96EU6 259 aaKnown RBP11.84□□□□□ -0.51
PFDN5-206ENST00000548984 NEK1Q96PY6 1258 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 COL20A1Q9P218 1284 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 SLC12A7Q9Y666 1083 aa11.84□□□□□ -0.51
PFDN5-206ENST00000548984 RANBP2P49792 3224 aaKnown RBP11.83□□□□□ -0.52
PFDN5-206ENST00000548984 TRIM43BA6NCK2 446 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 GCOM1H8Y6P7 765 aaPredicted RBP11.83□□□□□ -0.52
PFDN5-206ENST00000548984 EIF3JO75822 258 aaKnown RBP11.83□□□□□ -0.52
PFDN5-206ENST00000548984 REC8O95072 547 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 POLR2MP0CAP2 368 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 TXNP10599 105 aaKnown RBP11.83□□□□□ -0.52
PFDN5-206ENST00000548984 RAG1P15918 1043 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 EIF2AK2P19525 551 aaKnown RBP11.83□□□□□ -0.52
PFDN5-206ENST00000548984 IRX5P78411 483 aaPredicted RBP11.83□□□□□ -0.52
PFDN5-206ENST00000548984 FAAP100Q0VG06 881 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 SLC35G1Q2M3R5 365 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 CXCL17Q6UXB2 119 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 FAM126BQ8IXS8 530 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 TBC1D5Q92609 795 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 TRIM43Q96BQ3 446 aaPredicted RBP11.83□□□□□ -0.52
PFDN5-206ENST00000548984 TAAR1Q96RJ0 339 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
PFDN5-206ENST00000548984 PXMP2Q9NR77 195 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 TMEM39AQ9NV64 488 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 TBX21Q9UL17 535 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 KIAA1217Q5T5P2 1943 aa11.83□□□□□ -0.52
PFDN5-206ENST00000548984 A6NJR5 290 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 NR3C2P08235 984 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 RCAN1P53805 252 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 FPGSQ05932 587 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 ITGA7Q13683 1181 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 CCDC62Q6P9F0 684 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 KCNV1Q6PIU1 500 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 DHX32Q7L7V1 743 aaKnown RBP11.82□□□□□ -0.52
PFDN5-206ENST00000548984 SH3RF1Q7Z6J0 888 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 TEX2Q8IWB9 1127 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 BADQ92934 168 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 PDCD2LQ9BRP1 358 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 MTG1Q9BT17 334 aaPredicted RBP11.82□□□□□ -0.52
PFDN5-206ENST00000548984 MYL10Q9BUA6 226 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 RBM28Q9NW13 759 aaKnown RBP11.82□□□□□ -0.52
PFDN5-206ENST00000548984 PCDH10Q9P2E7 1040 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 DNAH12Q6ZR08 3092 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 FRMPD4Q14CM0 1322 aa11.82□□□□□ -0.52
PFDN5-206ENST00000548984 STAM2O75886 525 aa11.81□□□□□ -0.52
PFDN5-206ENST00000548984 TIMP1P01033 207 aa11.81□□□□□ -0.52
PFDN5-206ENST00000548984 GH1P01241 217 aa11.81□□□□□ -0.52
PFDN5-206ENST00000548984 CCND2P30279 289 aa11.81□□□□□ -0.52
PFDN5-206ENST00000548984 PURAQ00577 322 aaKnown RBP11.81□□□□□ -0.52
PFDN5-206ENST00000548984 APOA5Q6Q788 366 aa11.81□□□□□ -0.52
PFDN5-206ENST00000548984 TMTC3Q6ZXV5 915 aa11.81□□□□□ -0.52
PFDN5-206ENST00000548984 MICU3Q86XE3 530 aa11.81□□□□□ -0.52
PFDN5-206ENST00000548984 FANCBQ8NB91 859 aa11.81□□□□□ -0.52
PFDN5-206ENST00000548984 KCNB2Q92953 911 aa11.81□□□□□ -0.52
PFDN5-206ENST00000548984 CUL5Q93034 780 aa11.81□□□□□ -0.52
PFDN5-206ENST00000548984 EMID1Q96A84 441 aaPredicted RBP11.81□□□□□ -0.52
PFDN5-206ENST00000548984 SCN10AQ9Y5Y9 1956 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 BAZ2BQ9UIF8 2168 aaKnown RBP11.8□□□□□ -0.52
PFDN5-206ENST00000548984 PIK3CDO00329 1044 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 SOX1O00570 391 aaPredicted RBP11.8□□□□□ -0.52
PFDN5-206ENST00000548984 ARIH2O95376 493 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 PLEKHA8P1O95397 391 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 CD4P01730 458 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 MYL3P08590 195 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 SUPT20HL2P0C7V6 817 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 HOXA13P31271 388 aaPredicted RBP11.8□□□□□ -0.52
PFDN5-206ENST00000548984 HSPA4P34932 840 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 EXOSC10Q01780 885 aaKnown RBP11.8□□□□□ -0.52
PFDN5-206ENST00000548984 PTPN11Q06124 597 aaPredicted RBP11.8□□□□□ -0.52
PFDN5-206ENST00000548984 PPIGQ13427 754 aaKnown RBP eCLIP11.8□□□□□ -0.526e-7■□□□□ 9.2
PFDN5-206ENST00000548984 PGM5Q15124 567 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 TMEM63BQ5T3F8 832 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 MFSD5Q6N075 450 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 XRRA1Q6P2D8 792 aa11.8□□□□□ -0.52
PFDN5-206ENST00000548984 SEPT14Q6ZU15 432 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms