RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 NPLOC4Q8TAT6 608 aa13.47□□□□□ -0.25
SNHG1-221ENST00000544983 MORC4Q8TE76 937 aa13.47□□□□□ -0.25
SNHG1-221ENST00000544983 C8orf76Q96K31 380 aa13.47□□□□□ -0.25
SNHG1-221ENST00000544983 TINF2Q9BSI4 451 aa13.47□□□□□ -0.25
SNHG1-221ENST00000544983 PHF20Q9BVI0 1012 aa13.47□□□□□ -0.25
SNHG1-221ENST00000544983 PCDHA4Q9UN74 947 aa13.47□□□□□ -0.25
SNHG1-221ENST00000544983 FRMPD4Q14CM0 1322 aa13.46□□□□□ -0.25
SNHG1-221ENST00000544983 PPFIA3O75145 1194 aa13.46□□□□□ -0.25
SNHG1-221ENST00000544983 STAM2O75886 525 aa13.46□□□□□ -0.25
SNHG1-221ENST00000544983 HOXA13P31271 388 aaPredicted RBP13.46□□□□□ -0.25
SNHG1-221ENST00000544983 CLK2P49760 499 aaKnown RBP13.46□□□□□ -0.25
SNHG1-221ENST00000544983 ALDH5A1P51649 535 aaPredicted RBP13.46□□□□□ -0.25
SNHG1-221ENST00000544983 UBXN2AP68543 259 aa13.46□□□□□ -0.25
SNHG1-221ENST00000544983 SLC9C1Q4G0N8 1177 aa13.46□□□□□ -0.25
SNHG1-221ENST00000544983 USP17L6PQ6QN14 398 aa13.46□□□□□ -0.25
SNHG1-221ENST00000544983 BLIDQ8IZY5 108 aa13.46□□□□□ -0.25
SNHG1-221ENST00000544983 FBXO18Q8NFZ0 1043 aa13.46□□□□□ -0.25
SNHG1-221ENST00000544983 TBC1D5Q92609 795 aa13.46□□□□□ -0.25
SNHG1-221ENST00000544983 CNPY2Q9Y2B0 182 aa13.46□□□□□ -0.25
SNHG1-221ENST00000544983 PTCH2Q9Y6C5 1203 aa13.46□□□□□ -0.25
SNHG1-221ENST00000544983 PLXNA1Q9UIW2 1896 aa13.46□□□□□ -0.26
SNHG1-221ENST00000544983 ZSWIM8A7E2V4 1837 aa13.46□□□□□ -0.26
SNHG1-221ENST00000544983 SOWAHBA6NEL2 793 aa13.45□□□□□ -0.26
SNHG1-221ENST00000544983 CAPN2P17655 700 aa13.45□□□□□ -0.26
SNHG1-221ENST00000544983 EDNRBP24530 442 aa13.45□□□□□ -0.26
SNHG1-221ENST00000544983 GJB2P29033 226 aa13.45□□□□□ -0.26
SNHG1-221ENST00000544983 FCHSD1Q86WN1 690 aa13.45□□□□□ -0.26
SNHG1-221ENST00000544983 AIFM3Q96NN9 605 aa13.45□□□□□ -0.26
SNHG1-221ENST00000544983 TAAR1Q96RJ0 339 aa13.45□□□□□ -0.26
SNHG1-221ENST00000544983 ABHD16BQ9H3Z7 469 aa13.45□□□□□ -0.26
SNHG1-221ENST00000544983 PXMP2Q9NR77 195 aa13.45□□□□□ -0.26
SNHG1-221ENST00000544983 RPTORQ8N122 1335 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 EIF3JO75822 258 aaKnown RBP13.44□□□□□ -0.26
SNHG1-221ENST00000544983 MMP1P03956 469 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 NR3C2P08235 984 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 CCND2P30279 289 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 PDE4DQ08499 809 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 STXBP2Q15833 593 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 KRT40Q6A162 431 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 ARMCX2Q7L311 632 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 KRT25Q7Z3Z0 450 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 VSIG10LQ86VR7 867 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 TRIB2Q92519 343 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 ARMC5Q96C12 935 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 FGD4Q96M96 766 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 PDCD2LQ9BRP1 358 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 VTA1Q9NP79 307 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 COL20A1Q9P218 1284 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 BIN2Q9UBW5 565 aaPredicted RBP13.44□□□□□ -0.26
SNHG1-221ENST00000544983 PCDHA6Q9UN73 950 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 PCDHA8Q9Y5H6 950 aa13.44□□□□□ -0.26
SNHG1-221ENST00000544983 M0R2N6 131 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 ELNP15502 786 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 KRT2P35908 639 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 SREBF1P36956 1147 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 ANP32AP39687 249 aaKnown RBP13.43□□□□□ -0.26
SNHG1-221ENST00000544983 PGM5Q15124 567 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 NPY5RQ15761 445 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 CCL14Q16627 93 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 UBE2SQ16763 222 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 MAP3K21Q5TCX8 1036 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 PCNX4Q63HM2 1172 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 LARP1BQ659C4 914 aaKnown RBP13.43□□□□□ -0.26
SNHG1-221ENST00000544983 KCNV1Q6PIU1 500 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 ANO3Q9BYT9 981 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 MCOLN1Q9GZU1 580 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 FOXP1Q9H334 677 aaPredicted RBP13.43□□□□□ -0.26
SNHG1-221ENST00000544983 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.43□□□□□ -0.26
SNHG1-221ENST00000544983 KCNJ14Q9UNX9 436 aa13.43□□□□□ -0.26
SNHG1-221ENST00000544983 ASTN1O14525 1302 aa13.42□□□□□ -0.26
SNHG1-221ENST00000544983 CCDC194A0A1B0GVG4 234 aa13.42□□□□□ -0.26
SNHG1-221ENST00000544983 H3BQV1 296 aa13.42□□□□□ -0.26
SNHG1-221ENST00000544983 MSCO60682 206 aa13.42□□□□□ -0.26
SNHG1-221ENST00000544983 INHAP05111 366 aa13.42□□□□□ -0.26
SNHG1-221ENST00000544983 CYP3A4P08684 503 aa13.42□□□□□ -0.26
SNHG1-221ENST00000544983 EIF2AK2P19525 551 aaKnown RBP13.42□□□□□ -0.26
SNHG1-221ENST00000544983 USP11P51784 963 aa13.42□□□□□ -0.26
SNHG1-221ENST00000544983 SHISA4Q96DD7 197 aa13.42□□□□□ -0.26
SNHG1-221ENST00000544983 NAP1L4Q99733 375 aaKnown RBP13.42□□□□□ -0.26
SNHG1-221ENST00000544983 HMX1Q9NP08 348 aaPredicted RBP13.42□□□□□ -0.26
SNHG1-221ENST00000544983 FLRT1Q9NZU1 646 aa13.42□□□□□ -0.26
SNHG1-221ENST00000544983 LCTP09848 1927 aa13.41□□□□□ -0.26
SNHG1-221ENST00000544983 MAFGO15525 162 aa13.41□□□□□ -0.26
SNHG1-221ENST00000544983 SNAI1O95863 264 aaPredicted RBP13.41□□□□□ -0.26
SNHG1-221ENST00000544983 TGFB3P10600 412 aa13.41□□□□□ -0.26
SNHG1-221ENST00000544983 CYBAP13498 195 aa13.41□□□□□ -0.26
SNHG1-221ENST00000544983 PRKAR2AP13861 404 aaKnown RBP13.41□□□□□ -0.26
SNHG1-221ENST00000544983 CYP2C19P33261 490 aa13.41□□□□□ -0.26
SNHG1-221ENST00000544983 CACNB2Q08289 660 aaPredicted RBP13.41□□□□□ -0.26
SNHG1-221ENST00000544983 ACVR2BQ13705 512 aa13.41□□□□□ -0.26
SNHG1-221ENST00000544983 NONOQ15233 471 aaKnown RBP eCLIP13.41□□□□□ -0.26
SNHG1-221ENST00000544983 GNPTABQ3T906 1256 aa13.41□□□□□ -0.26
SNHG1-221ENST00000544983 JAKMIP3Q5VZ66 844 aa13.41□□□□□ -0.26
SNHG1-221ENST00000544983 IQSEC1Q6DN90 963 aa13.41□□□□□ -0.26
SNHG1-221ENST00000544983 DIS3L2Q8IYB7 885 aaKnown RBP13.41□□□□□ -0.26
SNHG1-221ENST00000544983 CDHR1Q96JP9 859 aa13.41□□□□□ -0.26
SNHG1-221ENST00000544983 PURBQ96QR8 312 aaKnown RBP13.41□□□□□ -0.26
SNHG1-221ENST00000544983 NKRFO15226 690 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNHG1-221ENST00000544983 SEPT4O43236 478 aa13.4□□□□□ -0.26
SNHG1-221ENST00000544983 U2AF2P26368 475 aaKnown RBP eCLIP13.4□□□□□ -0.262e-28■□□□□ 11.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms