RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 OTUD7AQ8TE49 926 aaPredicted RBP18.29■□□□□ 0.52
CD4-212ENST00000544344 HLA-CQ95604 372 aa18.29■□□□□ 0.52
CD4-212ENST00000544344 GPHNQ9NQX3 736 aaPredicted RBP18.29■□□□□ 0.52
CD4-212ENST00000544344 ANAPC4Q9UJX5 808 aa18.29■□□□□ 0.52
CD4-212ENST00000544344 TTC41PQ6P2S7 1318 aa18.28■□□□□ 0.52
CD4-212ENST00000544344 PTPDC1A2A3K4 754 aa18.28■□□□□ 0.52
CD4-212ENST00000544344 LCHNA4D1U4 455 aa18.28■□□□□ 0.52
CD4-212ENST00000544344 NKRFO15226 690 aaKnown RBP eCLIP18.28■□□□□ 0.52
CD4-212ENST00000544344 PPP2R5BQ15173 497 aa18.28■□□□□ 0.52
CD4-212ENST00000544344 RETREG2Q8NC44 543 aa18.28■□□□□ 0.52
CD4-212ENST00000544344 FTOQ9C0B1 505 aaKnown RBP eCLIP18.28■□□□□ 0.52
CD4-212ENST00000544344 CD320Q9NPF0 282 aa18.28■□□□□ 0.52
CD4-212ENST00000544344 RBAK-RBAKDNI3L0D1 243 aa18.27■□□□□ 0.52
CD4-212ENST00000544344 ORC4O43929 436 aa18.27■□□□□ 0.52
CD4-212ENST00000544344 RANBP6O60518 1105 aaKnown RBP18.27■□□□□ 0.52
CD4-212ENST00000544344 KPNA6O60684 536 aa18.27■□□□□ 0.52
CD4-212ENST00000544344 BAIAP3O94812 1187 aa18.27■□□□□ 0.52
CD4-212ENST00000544344 ARIH2O95376 493 aa18.27■□□□□ 0.52
CD4-212ENST00000544344 CALML3P27482 149 aa18.27■□□□□ 0.52
CD4-212ENST00000544344 RPS6P62753 249 aaKnown RBP18.27■□□□□ 0.52
CD4-212ENST00000544344 VPS53Q5VIR6 699 aa18.27■□□□□ 0.52
CD4-212ENST00000544344 RNF207Q6ZRF8 634 aa18.27■□□□□ 0.52
CD4-212ENST00000544344 TMCO2Q7Z6W1 182 aaPredicted RBP18.27■□□□□ 0.52
CD4-212ENST00000544344 SCFD2Q8WU76 684 aa18.27■□□□□ 0.52
CD4-212ENST00000544344 FSD1Q9BTV5 496 aa18.27■□□□□ 0.52
CD4-212ENST00000544344 RCAN3Q9UKA8 241 aa18.27■□□□□ 0.52
CD4-212ENST00000544344 FRMPD2Q68DX3 1309 aaPredicted RBP18.26■□□□□ 0.51
CD4-212ENST00000544344 KIF28PB7ZC32 967 aa18.26■□□□□ 0.51
CD4-212ENST00000544344 WDR5P61964 334 aaKnown RBP18.26■□□□□ 0.51
CD4-212ENST00000544344 PDE4DQ08499 809 aa18.26■□□□□ 0.51
CD4-212ENST00000544344 BFSP2Q13515 415 aa18.26■□□□□ 0.51
CD4-212ENST00000544344 TMEM31Q5JXX7 168 aa18.26■□□□□ 0.51
CD4-212ENST00000544344 TMEM47Q9BQJ4 181 aa18.26■□□□□ 0.51
CD4-212ENST00000544344 GPCPD1Q9NPB8 672 aa18.26■□□□□ 0.51
CD4-212ENST00000544344 RAD50Q92878 1312 aa18.25■□□□□ 0.51
CD4-212ENST00000544344 GPR37L1O60883 481 aa18.25■□□□□ 0.51
CD4-212ENST00000544344 TXNP10599 105 aaKnown RBP18.25■□□□□ 0.51
CD4-212ENST00000544344 TCTN1Q2MV58 587 aa18.25■□□□□ 0.51
CD4-212ENST00000544344 BRDTQ58F21 947 aaPredicted RBP18.25■□□□□ 0.51
CD4-212ENST00000544344 CCDC62Q6P9F0 684 aa18.25■□□□□ 0.51
CD4-212ENST00000544344 DHX38Q92620 1227 aaKnown RBP18.25■□□□□ 0.51
CD4-212ENST00000544344 HCN4Q9Y3Q4 1203 aa18.25■□□□□ 0.51
CD4-212ENST00000544344 PDHBP11177 359 aa18.24■□□□□ 0.51
CD4-212ENST00000544344 TOP1P11387 765 aaKnown RBP18.24■□□□□ 0.51
CD4-212ENST00000544344 DEFB103AP81534 67 aa18.24■□□□□ 0.51
CD4-212ENST00000544344 PTGISQ16647 500 aa18.24■□□□□ 0.51
CD4-212ENST00000544344 GDF6Q6KF10 455 aaPredicted RBP18.24■□□□□ 0.51
CD4-212ENST00000544344 SESTD1Q86VW0 696 aa18.24■□□□□ 0.51
CD4-212ENST00000544344 DNERQ8NFT8 737 aa18.24■□□□□ 0.51
CD4-212ENST00000544344 AFAP1L1Q8TED9 768 aa18.24■□□□□ 0.51
CD4-212ENST00000544344 GDPD5Q8WTR4 605 aa18.24■□□□□ 0.51
CD4-212ENST00000544344 KAT2BQ92831 832 aa18.24■□□□□ 0.51
CD4-212ENST00000544344 WDR19Q8NEZ3 1342 aa18.23■□□□□ 0.51
CD4-212ENST00000544344 RBL2Q08999 1139 aa18.23■□□□□ 0.51
CD4-212ENST00000544344 CAGE1Q8TC20 777 aa18.23■□□□□ 0.51
CD4-212ENST00000544344 SUGCTQ9HAC7 445 aa18.23■□□□□ 0.51
CD4-212ENST00000544344 TCP11L1Q9NUJ3 509 aa18.23■□□□□ 0.51
CD4-212ENST00000544344 LMCD1Q9NZU5 365 aa18.23■□□□□ 0.51
CD4-212ENST00000544344 NOD1Q9Y239 953 aa18.23■□□□□ 0.51
CD4-212ENST00000544344 PIEZO1Q92508 2521 aa18.23■□□□□ 0.51
CD4-212ENST00000544344 MUC6Q6W4X9 2439 aa18.23■□□□□ 0.51
CD4-212ENST00000544344 SIP14410 1827 aa18.23■□□□□ 0.51
CD4-212ENST00000544344 SALL3Q9BXA9 1300 aa18.23■□□□□ 0.51
CD4-212ENST00000544344 FAM86C2PA6NEL3 165 aa18.22■□□□□ 0.51
CD4-212ENST00000544344 PI4K2BG5E9Z4 385 aa18.22■□□□□ 0.51
CD4-212ENST00000544344 NBNO60934 754 aa18.22■□□□□ 0.51
CD4-212ENST00000544344 CXCL10P02778 98 aa18.22■□□□□ 0.51
CD4-212ENST00000544344 MMP3P08254 477 aa18.22■□□□□ 0.51
CD4-212ENST00000544344 SNHG28P0DPA3 235 aa18.22■□□□□ 0.51
CD4-212ENST00000544344 KCNJ6P48051 423 aa18.22■□□□□ 0.51
CD4-212ENST00000544344 ZNF543Q08ER8 600 aa18.22■□□□□ 0.51
CD4-212ENST00000544344 ALX1Q15699 326 aa18.22■□□□□ 0.51
CD4-212ENST00000544344 AFG1LQ8WV93 481 aa18.22■□□□□ 0.51
CD4-212ENST00000544344 PNMA2Q9UL42 364 aa18.22■□□□□ 0.51
CD4-212ENST00000544344 KIAA1217Q5T5P2 1943 aa18.21■□□□□ 0.51
CD4-212ENST00000544344 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.21■□□□□ 0.51
CD4-212ENST00000544344 SELPP16109 830 aa18.21■□□□□ 0.51
CD4-212ENST00000544344 CHMP4BP1P59074 171 aa18.21■□□□□ 0.51
CD4-212ENST00000544344 ERVK-21P61565 698 aa18.21■□□□□ 0.51
CD4-212ENST00000544344 ARHGAP1Q07960 439 aa18.21■□□□□ 0.51
CD4-212ENST00000544344 TRAF7Q6Q0C0 670 aa18.21■□□□□ 0.51
CD4-212ENST00000544344 LRRC8DQ7L1W4 858 aa18.21■□□□□ 0.51
CD4-212ENST00000544344 LINC01553A4QN01 128 aa18.2■□□□□ 0.5
CD4-212ENST00000544344 GJB5O95377 273 aa18.2■□□□□ 0.5
CD4-212ENST00000544344 FGAP02671 866 aa18.2■□□□□ 0.5
CD4-212ENST00000544344 CKBP12277 381 aa18.2■□□□□ 0.5
CD4-212ENST00000544344 MX1P20591 662 aa18.2■□□□□ 0.5
CD4-212ENST00000544344 CNKSR3Q6P9H4 555 aa18.2■□□□□ 0.5
CD4-212ENST00000544344 CCDC155Q8N6L0 562 aa18.2■□□□□ 0.5
CD4-212ENST00000544344 RGS22Q8NE09 1264 aa18.2■□□□□ 0.5
CD4-212ENST00000544344 TBC1D5Q92609 795 aa18.2■□□□□ 0.5
CD4-212ENST00000544344 MPHOSPH6Q99547 160 aaKnown RBP18.2■□□□□ 0.5
CD4-212ENST00000544344 COL20A1Q9P218 1284 aa18.2■□□□□ 0.5
CD4-212ENST00000544344 LY6KQ17RY6 165 aa18.19■□□□□ 0.5
CD4-212ENST00000544344 RRP12Q5JTH9 1297 aaKnown RBP18.19■□□□□ 0.5
CD4-212ENST00000544344 WNT8BQ93098 351 aa18.19■□□□□ 0.5
CD4-212ENST00000544344 RAD9AQ99638 391 aa18.19■□□□□ 0.5
CD4-212ENST00000544344 ZBED2Q9BTP6 218 aa18.19■□□□□ 0.5
CD4-212ENST00000544344 CPVLQ9H3G5 476 aa18.19■□□□□ 0.5
CD4-212ENST00000544344 UBE2ZQ9H832 354 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms