RNA–Protein interactions for RNA: ENST00000544257.5

RIMKLB-212, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 1 (best)

Gene RIMKLB, Length 1,589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-212ENST00000544257 CPA1P15085 419 aa11.23□□□□□ -0.61
RIMKLB-212ENST00000544257 SLC35G1Q2M3R5 365 aa11.23□□□□□ -0.61
RIMKLB-212ENST00000544257 QRICH1Q2TAL8 776 aa11.23□□□□□ -0.61
RIMKLB-212ENST00000544257 MFSD14CQ5VZR4 134 aa11.23□□□□□ -0.61
RIMKLB-212ENST00000544257 RGS22Q8NE09 1264 aa11.23□□□□□ -0.61
RIMKLB-212ENST00000544257 MAML3Q96JK9 1138 aa11.23□□□□□ -0.61
RIMKLB-212ENST00000544257 AMNQ9BXJ7 453 aa11.23□□□□□ -0.61
RIMKLB-212ENST00000544257 A1CFQ9NQ94 594 aaKnown RBP11.23□□□□□ -0.61
RIMKLB-212ENST00000544257 HOMER2Q9NSB8 354 aa11.23□□□□□ -0.61
RIMKLB-212ENST00000544257 BIN2Q9UBW5 565 aaPredicted RBP11.23□□□□□ -0.61
RIMKLB-212ENST00000544257 NRBP1Q9UHY1 535 aa11.23□□□□□ -0.61
RIMKLB-212ENST00000544257 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
RIMKLB-212ENST00000544257 PLXNA1Q9UIW2 1896 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 LOC102724159A0A0B4J2E5 919 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 KLF18A0A0U1RQI7 1052 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 CYTH3O43739 400 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 PGK2P07205 417 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 SLC4A3P48751 1232 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 PWP2Q15269 919 aaKnown RBP11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 CCL14Q16627 93 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 MUM1L1Q5H9M0 696 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 MAMDC4Q6UXC1 1216 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 TMTC3Q6ZXV5 915 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 MICU3Q86XE3 530 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 FBXO11Q86XK2 927 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 FAM133AQ8N9E0 248 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 CLEC4DQ8WXI8 215 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 BRF1Q92994 677 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 ALDH8A1Q9H2A2 487 aaPredicted RBP11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 PAK6Q9NQU5 681 aaPredicted RBP11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 CYP39A1Q9NYL5 469 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 FLRT1Q9NZU1 646 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 RPTORQ8N122 1335 aa11.22□□□□□ -0.61
RIMKLB-212ENST00000544257 PNMA6FA0A0J9YX94 578 aa11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 CCDC196A0A1B0GTZ2 297 aa11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 CCL5P13501 91 aa11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 GHRHRQ02643 423 aa11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 RTN1Q16799 776 aa11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 IFFO2Q5TF58 517 aa11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 MCF2L2Q86YR7 1114 aa11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 SRBD1Q8N5C6 995 aaKnown RBP11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 SAMD3Q8N6K7 520 aa11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 VAT1LQ9HCJ6 419 aa11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 HMX1Q9NP08 348 aaPredicted RBP11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 MRPL11Q9Y3B7 192 aaKnown RBP11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 MYH6P13533 1939 aa11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 SYNGAP1Q96PV0 1343 aa11.21□□□□□ -0.61
RIMKLB-212ENST00000544257 GOLGA8AA7E2F4 631 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 GOLGA8BA8MQT2 603 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 NFIBO00712 420 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 PLEKHA8P1O95397 391 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 GJB1P08034 283 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 RXRAP19793 462 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 CACNB2Q08289 660 aaPredicted RBP11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 APOBRQ0VD83 1088 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 TOB2Q14106 344 aaPredicted RBP11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 MTFR1Q15390 333 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 USH1GQ495M9 461 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 RRP36Q96EU6 259 aaKnown RBP11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 PIGSQ96S52 555 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 TINF2Q9BSI4 451 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 UPF3BQ9BZI7 483 aaKnown RBP11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 RNF208Q9H0X6 261 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 UNC93B1Q9H1C4 597 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 PDRG1Q9NUG6 133 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 MAP3K20Q9NYL2 800 aaKnown RBP11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 SMCHD1A6NHR9 2005 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 PPP1R11O60927 126 aaPredicted RBP11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 RNF40O75150 1001 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 CYBAP13498 195 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 GJA8P48165 433 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 METAP2P50579 478 aaKnown RBP eCLIP11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 TRIM32Q13049 653 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 NSMFQ6X4W1 530 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 RNF207Q6ZRF8 634 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 HOMER1Q86YM7 354 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 CCDC144CPQ8IYA2 1237 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 ZNF274Q96GC6 653 aaPredicted RBP11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 FGD4Q96M96 766 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 FAM217BQ9NTX9 383 aaPredicted RBP11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 ADD3Q9UEY8 706 aaKnown RBP11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 SEC63Q9UGP8 760 aaKnown RBP11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 PCDHA1Q9Y5I3 950 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 CENPFP49454 3210 aa11.2□□□□□ -0.62
RIMKLB-212ENST00000544257 ASB14A6NK59 587 aa11.19□□□□□ -0.62
RIMKLB-212ENST00000544257 MSCO60682 206 aa11.19□□□□□ -0.62
RIMKLB-212ENST00000544257 TAL1P17542 331 aaPredicted RBP11.19□□□□□ -0.62
RIMKLB-212ENST00000544257 CYP2C19P33261 490 aa11.19□□□□□ -0.62
RIMKLB-212ENST00000544257 RBM25P49756 843 aaKnown RBP11.19□□□□□ -0.62
RIMKLB-212ENST00000544257 FUT2Q10981 343 aa11.19□□□□□ -0.62
RIMKLB-212ENST00000544257 BAATQ14032 418 aaPredicted RBP11.19□□□□□ -0.62
RIMKLB-212ENST00000544257 ANKRD1Q15327 319 aa11.19□□□□□ -0.62
RIMKLB-212ENST00000544257 TEX2Q8IWB9 1127 aa11.19□□□□□ -0.62
RIMKLB-212ENST00000544257 IL27Q8NEV9 243 aa11.19□□□□□ -0.62
RIMKLB-212ENST00000544257 DNERQ8NFT8 737 aa11.19□□□□□ -0.62
RIMKLB-212ENST00000544257 MORC4Q8TE76 937 aa11.19□□□□□ -0.62
RIMKLB-212ENST00000544257 CNTNAP5Q8WYK1 1306 aa11.19□□□□□ -0.62
RIMKLB-212ENST00000544257 LCTP09848 1927 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms