RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 NAPAP54920 295 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 SIK1P57059 783 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 TDRD12Q587J7 1177 aaKnown RBP11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 ARL6IP4Q66PJ3 421 aaKnown RBP11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 MAPKAPK5Q8IW41 473 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 MTA3Q9BTC8 594 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 CRNKL1Q9BZJ0 848 aaKnown RBP11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 MKNK2Q9HBH9 465 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 NFU1Q9UMS0 254 aa11.52□□□□□ -0.57
CDC42SE1-207ENST00000540998 MYMKA6NI61 221 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 ADAMTS2O95450 1211 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 FGRP09769 529 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 EIF6P56537 245 aaKnown RBP11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 CKAP4Q07065 602 aaKnown RBP11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 TGFBRAP1Q8WUH2 860 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 PACSIN1Q9BY11 444 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 MKRN1Q9UHC7 482 aaKnown RBP11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 ZNF335Q9H4Z2 1342 aaPredicted RBP11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 SLURP2P0DP57 97 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 GUCY1A3Q02108 690 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 CCDC181Q5TID7 509 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 PURBQ96QR8 312 aaKnown RBP11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 CAPS2Q9BXY5 557 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 VIPAS39Q9H9C1 493 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 FAM184BQ9ULE4 1060 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 JRKLQ9Y4A0 524 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 FAM169AQ9Y6X4 670 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 ORC4O43929 436 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 PTF1AQ7RTS3 328 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 ZIM3Q96PE6 472 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 TLR10Q9BXR5 811 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 NDST4Q9H3R1 872 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 CENPHQ9H3R5 247 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 SRP68Q9UHB9 627 aaKnown RBP11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 SIK3Q9Y2K2 1263 aa11.51□□□□□ -0.57
CDC42SE1-207ENST00000540998 FRMPD2Q68DX3 1309 aaPredicted RBP11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 SLC37A4O43826 429 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 TDP2O95551 362 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 SSBP05455 408 aaKnown RBP eCLIP11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 TSPY3P0CV98 308 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 TSPY8P0CW00 308 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 CALML3P27482 149 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 KIF5BP33176 963 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 MAGEA1P43355 309 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 KCNB1Q14721 858 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 DZIP1Q86YF9 867 aaKnown RBP11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 TBCKQ8TEA7 893 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 TMEM47Q9BQJ4 181 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 TARSL2A2RTX5 802 aaKnown RBP11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 KLRF2D3W0D1 207 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 TACC1O75410 805 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 OR52Z1P0C646 297 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 GTF2A1P52655 376 aaPredicted RBP11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 SEC24CP53992 1094 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 GUCY2DQ02846 1103 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 TADA2BQ86TJ2 420 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 NELFCDQ8IXH7 590 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 MSL3Q8N5Y2 521 aaKnown RBP11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 COA7Q96BR5 231 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 CCDC43Q96MW1 224 aaKnown RBP11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 TCP11L1Q9NUJ3 509 aa11.5□□□□□ -0.57
CDC42SE1-207ENST00000540998 SMCO2A6NFE2 343 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 PDE4CQ08493 712 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 ECM1Q16610 540 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 OR2W6PQ8NHA6 318 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 PIGSQ96S52 555 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 NPHP3-ACAD11A0A0J9YXS1 232 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 HIBADHP31937 336 aaKnown RBP11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 GRB10Q13322 594 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 VWA3BQ502W6 1294 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 ICE2Q659A1 982 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 C8orf74Q6P047 294 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 DHTKD1Q96HY7 919 aaPredicted RBP11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 EPB41L5Q9HCM4 733 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 BLOC1S4Q9NUP1 217 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 BARHL2Q9NY43 387 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 PLAGL2Q9UPG8 496 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 MYO1FO00160 1098 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 UBE4AQ14139 1066 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 KLHDC7AQ5VTJ3 777 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 TBC1D9BQ66K14 1250 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 DDX42Q86XP3 938 aaKnown RBP eCLIP11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 KLHL7Q8IXQ5 586 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 EHBP1Q8NDI1 1231 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 KRT12Q99456 494 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 CCSER1Q9C0I3 900 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 STIM2Q9P246 746 aa11.49□□□□□ -0.57
CDC42SE1-207ENST00000540998 TLR2O60603 784 aa11.48□□□□□ -0.57
CDC42SE1-207ENST00000540998 PALMO75781 387 aa11.48□□□□□ -0.57
CDC42SE1-207ENST00000540998 EHHADHQ08426 723 aa11.48□□□□□ -0.57
CDC42SE1-207ENST00000540998 CHADLQ6NUI6 762 aa11.48□□□□□ -0.57
CDC42SE1-207ENST00000540998 TMED8Q6PL24 325 aaPredicted RBP11.48□□□□□ -0.57
CDC42SE1-207ENST00000540998 CACNA2D4Q7Z3S7 1137 aa11.48□□□□□ -0.57
CDC42SE1-207ENST00000540998 CCDC170Q8IYT3 715 aa11.48□□□□□ -0.57
CDC42SE1-207ENST00000540998 TRIM58Q8NG06 486 aa11.48□□□□□ -0.57
CDC42SE1-207ENST00000540998 BAP1Q92560 729 aa11.48□□□□□ -0.57
CDC42SE1-207ENST00000540998 RNPC3Q96LT9 517 aaKnown RBP11.48□□□□□ -0.57
CDC42SE1-207ENST00000540998 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.48□□□□□ -0.57
CDC42SE1-207ENST00000540998 ZNF233A6NK53 670 aa11.48□□□□□ -0.57
CDC42SE1-207ENST00000540998 EIF3HO15372 352 aaKnown RBP eCLIP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms