RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 LZTS2Q9BRK4 669 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 NCOA5Q9HCD5 579 aaKnown RBP12.39□□□□□ -0.43
HMGA2-209ENST00000539662 PXMP2Q9NR77 195 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 V9GY48 417 aaPredicted RBP12.39□□□□□ -0.43
HMGA2-209ENST00000539662 RBM47A0AV96 593 aaKnown RBP12.38□□□□□ -0.43
HMGA2-209ENST00000539662 MEIS2O14770 477 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 DUSP11O75319 330 aaKnown RBP12.38□□□□□ -0.43
HMGA2-209ENST00000539662 PDIA3P30101 505 aaKnown RBP12.38□□□□□ -0.43
HMGA2-209ENST00000539662 METAP2P50579 478 aaKnown RBP eCLIP12.38□□□□□ -0.43
HMGA2-209ENST00000539662 EVCP57679 992 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 PDE4DQ08499 809 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 NTRK3Q16288 839 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 KCNA10Q16322 511 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 UBE2SQ16763 222 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 WWC2Q6AWC2 1192 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 C7orf61Q8IZ16 206 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 ARRDC4Q8NCT1 418 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 DNERQ8NFT8 737 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 TM6SF1Q9BZW5 370 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 UPF3AQ9H1J1 476 aaKnown RBP12.38□□□□□ -0.43
HMGA2-209ENST00000539662 VTA1Q9NP79 307 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 PHF24Q9UPV7 400 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 CYP46A1Q9Y6A2 500 aa12.38□□□□□ -0.43
HMGA2-209ENST00000539662 GCOM1H8Y6P7 765 aaPredicted RBP12.37□□□□□ -0.43
HMGA2-209ENST00000539662 DYNC1LI2O43237 492 aaPredicted RBP12.37□□□□□ -0.43
HMGA2-209ENST00000539662 RGS20O76081 388 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 NR3C2P08235 984 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 C6orf222P0C671 652 aaPredicted RBP12.37□□□□□ -0.43
HMGA2-209ENST00000539662 POLR2MP0CAP2 368 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 SYN1P17600 705 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 GJA9P57773 515 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 ARHGEF16Q5VV41 709 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 SEPT14Q6ZU15 432 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 NOL8Q76FK4 1167 aaKnown RBP12.37□□□□□ -0.43
HMGA2-209ENST00000539662 HEATR3Q7Z4Q2 680 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 NSUN6Q8TEA1 469 aaKnown RBP12.37□□□□□ -0.43
HMGA2-209ENST00000539662 PHKBQ93100 1093 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 PDCD2LQ9BRP1 358 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 HTATIP2Q9BUP3 242 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 WDR11Q9BZH6 1224 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 BCAS3Q9H6U6 928 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 PDRG1Q9NUG6 133 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 RBM28Q9NW13 759 aaKnown RBP12.37□□□□□ -0.43
HMGA2-209ENST00000539662 SEC63Q9UGP8 760 aaKnown RBP12.37□□□□□ -0.43
HMGA2-209ENST00000539662 ZMYND8Q9ULU4 1186 aaPredicted RBP12.37□□□□□ -0.43
HMGA2-209ENST00000539662 NID2Q14112 1375 aa12.37□□□□□ -0.43
HMGA2-209ENST00000539662 DOCK5Q9H7D0 1870 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 A0A1W2PQ45 241 aaPredicted RBP12.36□□□□□ -0.43
HMGA2-209ENST00000539662 A0A1W2PQY0 241 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 KBTBD13C9JR72 458 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 RBAK-RBAKDNI3L0D1 243 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 EVI5O60447 810 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 MYCLP12524 364 aaPredicted RBP12.36□□□□□ -0.43
HMGA2-209ENST00000539662 CAPN2P17655 700 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 ACLYP53396 1101 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 STK3Q13188 491 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 PGM5Q15124 567 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 PKN1Q16512 942 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 LY6KQ17RY6 165 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 IQSEC1Q6DN90 963 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 CCDC62Q6P9F0 684 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 SLC39A5Q6ZMH5 540 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 RNF180Q86T96 592 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 TLK2Q86UE8 772 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 PPP1R13LQ8WUF5 828 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 TPCN1Q9ULQ1 816 aa12.36□□□□□ -0.43
HMGA2-209ENST00000539662 RANBP2P49792 3224 aaKnown RBP12.36□□□□□ -0.43
HMGA2-209ENST00000539662 MYH7BA7E2Y1 1941 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 LOC102724159A0A0B4J2E5 919 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 STXBP3O00186 592 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 SORBS3O60504 671 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 LARGE1O95461 756 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 ASGR1P07306 291 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 RTP1P59025 263 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 MRPS9P82933 396 aaKnown RBP12.35□□□□□ -0.43
HMGA2-209ENST00000539662 PWP2Q15269 919 aaKnown RBP12.35□□□□□ -0.43
HMGA2-209ENST00000539662 TRIM60Q495X7 471 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 DUSP28Q4G0W2 176 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 GNASQ5JWF2 1037 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 PRPF38BQ5VTL8 546 aaKnown RBP12.35□□□□□ -0.43
HMGA2-209ENST00000539662 VSIG10LQ86VR7 867 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 IL17RAQ96F46 866 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 PGBD1Q96JS3 809 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 KIF2CQ99661 725 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 TMEM260Q9NX78 707 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 TELO2Q9Y4R8 837 aa12.35□□□□□ -0.43
HMGA2-209ENST00000539662 TXNP10599 105 aaKnown RBP12.34□□□□□ -0.43
HMGA2-209ENST00000539662 CST5P28325 142 aaPredicted RBP12.34□□□□□ -0.43
HMGA2-209ENST00000539662 RCAN1P53805 252 aa12.34□□□□□ -0.43
HMGA2-209ENST00000539662 AK2P54819 239 aa12.34□□□□□ -0.43
HMGA2-209ENST00000539662 ANAPC15P60006 121 aa12.34□□□□□ -0.43
HMGA2-209ENST00000539662 PSMC6P62333 389 aa12.34□□□□□ -0.43
HMGA2-209ENST00000539662 NKX3-2P78367 333 aa12.34□□□□□ -0.43
HMGA2-209ENST00000539662 SP2Q02086 613 aa12.34□□□□□ -0.43
HMGA2-209ENST00000539662 SNX17Q15036 470 aa12.34□□□□□ -0.43
HMGA2-209ENST00000539662 STXBP2Q15833 593 aa12.34□□□□□ -0.43
HMGA2-209ENST00000539662 FSCN1Q16658 493 aaKnown RBP12.34□□□□□ -0.43
HMGA2-209ENST00000539662 CXCL17Q6UXB2 119 aa12.34□□□□□ -0.43
HMGA2-209ENST00000539662 SH3RF1Q7Z6J0 888 aa12.34□□□□□ -0.43
HMGA2-209ENST00000539662 SMARCC2Q8TAQ2 1214 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms