RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 PURBQ96QR8 312 aaKnown RBP19.7■□□□□ 0.74
CLN6-202ENST00000538696 GLT8D2Q9H1C3 349 aa19.7■□□□□ 0.74
CLN6-202ENST00000538696 MAP3K20Q9NYL2 800 aaKnown RBP19.7■□□□□ 0.74
CLN6-202ENST00000538696 PCNTO95613 3336 aa19.7■□□□□ 0.74
CLN6-202ENST00000538696 M0R2N6 131 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 TRAK2O60296 914 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 COBLO75128 1261 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 KRT85P78386 507 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 CNTN2Q02246 1040 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 MAP2K5Q13163 448 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 TEX2Q8IWB9 1127 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 DIS3L2Q8IYB7 885 aaKnown RBP19.69■□□□□ 0.74
CLN6-202ENST00000538696 REXO1Q8N1G1 1221 aaKnown RBP19.69■□□□□ 0.74
CLN6-202ENST00000538696 FAM133AQ8N9E0 248 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 OXER1Q8TDS5 423 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 SOCS4Q8WXH5 440 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 USP6NLQ92738 828 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 BIN2Q9UBW5 565 aaPredicted RBP19.69■□□□□ 0.74
CLN6-202ENST00000538696 GJD2Q9UKL4 321 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 PCDHA6Q9UN73 950 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 PCDHA8Q9Y5H6 950 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 ASTN1O14525 1302 aa19.69■□□□□ 0.74
CLN6-202ENST00000538696 POTEB2H3BUK9 544 aa19.68■□□□□ 0.74
CLN6-202ENST00000538696 KRT2P35908 639 aa19.68■□□□□ 0.74
CLN6-202ENST00000538696 ZNF792Q3KQV3 632 aa19.68■□□□□ 0.74
CLN6-202ENST00000538696 JAKMIP3Q5VZ66 844 aa19.68■□□□□ 0.74
CLN6-202ENST00000538696 FCHSD1Q86WN1 690 aa19.68■□□□□ 0.74
CLN6-202ENST00000538696 BICD2Q8TD16 824 aa19.68■□□□□ 0.74
CLN6-202ENST00000538696 PGBD1Q96JS3 809 aa19.68■□□□□ 0.74
CLN6-202ENST00000538696 NUDT12Q9BQG2 462 aa19.68■□□□□ 0.74
CLN6-202ENST00000538696 TFIP11Q9UBB9 837 aaKnown RBP19.68■□□□□ 0.74
CLN6-202ENST00000538696 GABRQQ9UN88 632 aa19.68■□□□□ 0.74
CLN6-202ENST00000538696 SOWAHBA6NEL2 793 aa19.67■□□□□ 0.74
CLN6-202ENST00000538696 CTCFP49711 727 aaPredicted RBP19.67■□□□□ 0.74
CLN6-202ENST00000538696 PRKCZQ05513 592 aa19.67■□□□□ 0.74
CLN6-202ENST00000538696 AP3B2Q13367 1082 aa19.67■□□□□ 0.74
CLN6-202ENST00000538696 BRAPQ7Z569 592 aa19.67■□□□□ 0.74
CLN6-202ENST00000538696 NPLOC4Q8TAT6 608 aa19.67■□□□□ 0.74
CLN6-202ENST00000538696 TNFRSF25Q93038 417 aa19.67■□□□□ 0.74
CLN6-202ENST00000538696 TAAR1Q96RJ0 339 aa19.67■□□□□ 0.74
CLN6-202ENST00000538696 BRMS1Q9HCU9 246 aa19.67■□□□□ 0.74
CLN6-202ENST00000538696 FRMPD4Q14CM0 1322 aa19.67■□□□□ 0.74
CLN6-202ENST00000538696 BTBD18B2RXH4 712 aa19.66■□□□□ 0.74
CLN6-202ENST00000538696 GADD45BO75293 160 aaPredicted RBP19.66■□□□□ 0.74
CLN6-202ENST00000538696 RGS2P41220 211 aa19.66■□□□□ 0.74
CLN6-202ENST00000538696 LBX1P52954 281 aa19.66■□□□□ 0.74
CLN6-202ENST00000538696 NR5A1Q13285 461 aa19.66■□□□□ 0.74
CLN6-202ENST00000538696 APBA2Q99767 749 aa19.66■□□□□ 0.74
CLN6-202ENST00000538696 ANO3Q9BYT9 981 aa19.66■□□□□ 0.74
CLN6-202ENST00000538696 FTOQ9C0B1 505 aaKnown RBP eCLIP19.66■□□□□ 0.74
CLN6-202ENST00000538696 SRRDQ9UH36 339 aa19.66■□□□□ 0.74
CLN6-202ENST00000538696 RPTORQ8N122 1335 aa19.66■□□□□ 0.74
CLN6-202ENST00000538696 TCHHQ07283 1943 aa19.66■□□□□ 0.74
CLN6-202ENST00000538696 HOXC6P09630 235 aa19.65■□□□□ 0.74
CLN6-202ENST00000538696 CYP2B6P20813 491 aa19.65■□□□□ 0.74
CLN6-202ENST00000538696 ALDH5A1P51649 535 aaPredicted RBP19.65■□□□□ 0.74
CLN6-202ENST00000538696 SAFBQ15424 915 aaKnown RBP eCLIP19.65■□□□□ 0.74
CLN6-202ENST00000538696 EARS2Q5JPH6 523 aaKnown RBP19.65■□□□□ 0.74
CLN6-202ENST00000538696 MYSM1Q5VVJ2 828 aa19.65■□□□□ 0.74
CLN6-202ENST00000538696 DPP9Q86TI2 863 aa19.65■□□□□ 0.74
CLN6-202ENST00000538696 ZNF396Q96N95 335 aaPredicted RBP19.65■□□□□ 0.74
CLN6-202ENST00000538696 USP28Q96RU2 1077 aa19.65■□□□□ 0.74
CLN6-202ENST00000538696 PXMP2Q9NR77 195 aa19.65■□□□□ 0.74
CLN6-202ENST00000538696 KIAA1217Q5T5P2 1943 aa19.65■□□□□ 0.74
CLN6-202ENST00000538696 FAM205CA6NFA0 338 aa19.64■□□□□ 0.73
CLN6-202ENST00000538696 SPDYE3A6NKU9 549 aa19.64■□□□□ 0.73
CLN6-202ENST00000538696 FOSP01100 380 aaPredicted RBP19.64■□□□□ 0.73
CLN6-202ENST00000538696 GNRH1P01148 92 aa19.64■□□□□ 0.73
CLN6-202ENST00000538696 EIF2AK2P19525 551 aaKnown RBP19.64■□□□□ 0.73
CLN6-202ENST00000538696 U2AF2P26368 475 aaKnown RBP eCLIP19.64■□□□□ 0.73
CLN6-202ENST00000538696 FLT3LGP49771 235 aa19.64■□□□□ 0.73
CLN6-202ENST00000538696 GNL2Q13823 731 aaKnown RBP19.64■□□□□ 0.73
CLN6-202ENST00000538696 CSPP1Q1MSJ5 1256 aa19.64■□□□□ 0.73
CLN6-202ENST00000538696 OTOP1Q7RTM1 612 aa19.64■□□□□ 0.73
CLN6-202ENST00000538696 DNERQ8NFT8 737 aa19.64■□□□□ 0.73
CLN6-202ENST00000538696 LEO1Q8WVC0 666 aaPredicted RBP19.64■□□□□ 0.73
CLN6-202ENST00000538696 RMDN3Q96TC7 470 aa19.64■□□□□ 0.73
CLN6-202ENST00000538696 FOXP1Q9H334 677 aaPredicted RBP19.64■□□□□ 0.73
CLN6-202ENST00000538696 DIS3Q9Y2L1 958 aaKnown RBP19.64■□□□□ 0.73
CLN6-202ENST00000538696 HOXD10P28358 340 aa19.63■□□□□ 0.73
CLN6-202ENST00000538696 UBXN2AP68543 259 aa19.63■□□□□ 0.73
CLN6-202ENST00000538696 ARHGEF6Q15052 776 aa19.63■□□□□ 0.73
CLN6-202ENST00000538696 MCTP2Q6DN12 878 aa19.63■□□□□ 0.73
CLN6-202ENST00000538696 KRT25Q7Z3Z0 450 aa19.63■□□□□ 0.73
CLN6-202ENST00000538696 IL31RAQ8NI17 732 aa19.63■□□□□ 0.73
CLN6-202ENST00000538696 GPT2Q8TD30 523 aa19.63■□□□□ 0.73
CLN6-202ENST00000538696 MAML3Q96JK9 1138 aa19.63■□□□□ 0.73
CLN6-202ENST00000538696 PDCD2LQ9BRP1 358 aa19.63■□□□□ 0.73
CLN6-202ENST00000538696 ADD3Q9UEY8 706 aaKnown RBP19.63■□□□□ 0.73
CLN6-202ENST00000538696 TRIM17Q9Y577 477 aa19.63■□□□□ 0.73
CLN6-202ENST00000538696 DDX49Q9Y6V7 483 aaKnown RBP19.63■□□□□ 0.73
CLN6-202ENST00000538696 CEBPZQ03701 1054 aaKnown RBP19.62■□□□□ 0.73
CLN6-202ENST00000538696 PGM5Q15124 567 aa19.62■□□□□ 0.73
CLN6-202ENST00000538696 CCL14Q16627 93 aa19.62■□□□□ 0.73
CLN6-202ENST00000538696 SKOR2Q2VWA4 1001 aaPredicted RBP19.62■□□□□ 0.73
CLN6-202ENST00000538696 ARHGEF16Q5VV41 709 aa19.62■□□□□ 0.73
CLN6-202ENST00000538696 ATL3Q6DD88 541 aa19.62■□□□□ 0.73
CLN6-202ENST00000538696 PIK3AP1Q6ZUJ8 805 aa19.62■□□□□ 0.73
CLN6-202ENST00000538696 ZNF467Q7Z7K2 595 aaPredicted RBP19.62■□□□□ 0.73
CLN6-202ENST00000538696 NSUN6Q8TEA1 469 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms