RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 CTAGE5O15320 804 aa13.77□□□□□ -0.21
KNTC1-208ENST00000535410 PRC1O43663 620 aa13.77□□□□□ -0.21
KNTC1-208ENST00000535410 EIF3JO75822 258 aaKnown RBP13.77□□□□□ -0.21
KNTC1-208ENST00000535410 TIMP1P01033 207 aa13.77□□□□□ -0.21
KNTC1-208ENST00000535410 SUPT20HL2P0C7V6 817 aa13.77□□□□□ -0.21
KNTC1-208ENST00000535410 TXNP10599 105 aaKnown RBP13.77□□□□□ -0.21
KNTC1-208ENST00000535410 FPGSQ05932 587 aa13.77□□□□□ -0.21
KNTC1-208ENST00000535410 TROAPQ12815 778 aa13.77□□□□□ -0.21
KNTC1-208ENST00000535410 ITGA7Q13683 1181 aa13.77□□□□□ -0.21
KNTC1-208ENST00000535410 KCNV1Q6PIU1 500 aa13.77□□□□□ -0.21
KNTC1-208ENST00000535410 SYNE3Q6ZMZ3 975 aa13.77□□□□□ -0.21
KNTC1-208ENST00000535410 SH3RF1Q7Z6J0 888 aa13.77□□□□□ -0.21
KNTC1-208ENST00000535410 MB21D2Q8IYB1 491 aaPredicted RBP13.77□□□□□ -0.21
KNTC1-208ENST00000535410 TMEM199Q8N511 208 aa13.77□□□□□ -0.21
KNTC1-208ENST00000535410 OR6J1Q8NGC5 347 aa13.77□□□□□ -0.21
KNTC1-208ENST00000535410 SLC27A2O14975 620 aa13.76□□□□□ -0.21
KNTC1-208ENST00000535410 CDC45O75419 566 aa13.76□□□□□ -0.21
KNTC1-208ENST00000535410 LIFRP42702 1097 aa13.76□□□□□ -0.21
KNTC1-208ENST00000535410 PPIGQ13427 754 aaKnown RBP eCLIP13.76□□□□□ -0.21
KNTC1-208ENST00000535410 KRT32Q14532 448 aa13.76□□□□□ -0.21
KNTC1-208ENST00000535410 NECTIN1Q15223 517 aa13.76□□□□□ -0.21
KNTC1-208ENST00000535410 CREB3L3Q68CJ9 461 aa13.76□□□□□ -0.21
KNTC1-208ENST00000535410 STOX1Q6ZVD7 989 aa13.76□□□□□ -0.21
KNTC1-208ENST00000535410 CHST3Q7LGC8 479 aa13.76□□□□□ -0.21
KNTC1-208ENST00000535410 HOMER1Q86YM7 354 aa13.76□□□□□ -0.21
KNTC1-208ENST00000535410 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
KNTC1-208ENST00000535410 TAAR1Q96RJ0 339 aa13.76□□□□□ -0.21
KNTC1-208ENST00000535410 SEC63Q9UGP8 760 aaKnown RBP13.76□□□□□ -0.21
KNTC1-208ENST00000535410 SLC12A7Q9Y666 1083 aa13.76□□□□□ -0.21
KNTC1-208ENST00000535410 GCOM1H8Y6P7 765 aaPredicted RBP13.75□□□□□ -0.21
KNTC1-208ENST00000535410 NR3C2P08235 984 aa13.75□□□□□ -0.21
KNTC1-208ENST00000535410 POLR2MP0CAP2 368 aa13.75□□□□□ -0.21
KNTC1-208ENST00000535410 HSD17B4P51659 736 aa13.75□□□□□ -0.21
KNTC1-208ENST00000535410 GHRHRQ02643 423 aa13.75□□□□□ -0.21
KNTC1-208ENST00000535410 MFSD5Q6N075 450 aa13.75□□□□□ -0.21
KNTC1-208ENST00000535410 FAM126BQ8IXS8 530 aa13.75□□□□□ -0.21
KNTC1-208ENST00000535410 ZNF654Q8IZM8 581 aa13.75□□□□□ -0.21
KNTC1-208ENST00000535410 SLC43A3Q8NBI5 491 aa13.75□□□□□ -0.21
KNTC1-208ENST00000535410 LRCH3Q96II8 777 aa13.75□□□□□ -0.21
KNTC1-208ENST00000535410 MTG1Q9BT17 334 aaPredicted RBP13.75□□□□□ -0.21
KNTC1-208ENST00000535410 TBX21Q9UL17 535 aa13.75□□□□□ -0.21
KNTC1-208ENST00000535410 A6NJR5 290 aa13.74□□□□□ -0.21
KNTC1-208ENST00000535410 SOX1O00570 391 aaPredicted RBP13.74□□□□□ -0.21
KNTC1-208ENST00000535410 GH1P01241 217 aa13.74□□□□□ -0.21
KNTC1-208ENST00000535410 MYL3P08590 195 aa13.74□□□□□ -0.21
KNTC1-208ENST00000535410 HMGB1P09429 215 aaKnown RBP13.74□□□□□ -0.21
KNTC1-208ENST00000535410 EIF2AK2P19525 551 aaKnown RBP13.74□□□□□ -0.21
KNTC1-208ENST00000535410 ANTXR2P58335 489 aa13.74□□□□□ -0.21
KNTC1-208ENST00000535410 IRX5P78411 483 aaPredicted RBP13.74□□□□□ -0.21
KNTC1-208ENST00000535410 SHHQ15465 462 aa13.74□□□□□ -0.21
KNTC1-208ENST00000535410 FAM109BQ6ICB4 259 aaPredicted RBP13.74□□□□□ -0.21
KNTC1-208ENST00000535410 SEPT14Q6ZU15 432 aa13.74□□□□□ -0.21
KNTC1-208ENST00000535410 DEFB123Q8N688 67 aa13.74□□□□□ -0.21
KNTC1-208ENST00000535410 TBC1D5Q92609 795 aa13.74□□□□□ -0.21
KNTC1-208ENST00000535410 CUL5Q93034 780 aa13.74□□□□□ -0.21
KNTC1-208ENST00000535410 PIGSQ96S52 555 aa13.74□□□□□ -0.21
KNTC1-208ENST00000535410 SPZ1Q9BXG8 430 aa13.74□□□□□ -0.21
KNTC1-208ENST00000535410 MTIF3Q9H2K0 278 aaKnown RBP13.74□□□□□ -0.21
KNTC1-208ENST00000535410 LY9Q9HBG7 655 aa13.74□□□□□ -0.21
KNTC1-208ENST00000535410 PXMP2Q9NR77 195 aa13.74□□□□□ -0.21
KNTC1-208ENST00000535410 DDX49Q9Y6V7 483 aaKnown RBP13.74□□□□□ -0.21
KNTC1-208ENST00000535410 MCM3APO60318 1980 aa13.73□□□□□ -0.21
KNTC1-208ENST00000535410 STAM2O75886 525 aa13.73□□□□□ -0.21
KNTC1-208ENST00000535410 CD4P01730 458 aa13.73□□□□□ -0.21
KNTC1-208ENST00000535410 TGFB3P10600 412 aa13.73□□□□□ -0.21
KNTC1-208ENST00000535410 CASTP20810 708 aaKnown RBP13.73□□□□□ -0.21
KNTC1-208ENST00000535410 PURAQ00577 322 aaKnown RBP13.73□□□□□ -0.21
KNTC1-208ENST00000535410 PTPN11Q06124 597 aaPredicted RBP13.73□□□□□ -0.21
KNTC1-208ENST00000535410 LAMC2Q13753 1193 aa13.73□□□□□ -0.21
KNTC1-208ENST00000535410 NFRKBQ6P4R8 1299 aa13.73□□□□□ -0.21
KNTC1-208ENST00000535410 RNPC3Q96LT9 517 aaKnown RBP13.73□□□□□ -0.21
KNTC1-208ENST00000535410 NEK1Q96PY6 1258 aa13.73□□□□□ -0.21
KNTC1-208ENST00000535410 HIPK3Q9H422 1215 aa13.73□□□□□ -0.21
KNTC1-208ENST00000535410 MRVI1Q9Y6F6 885 aa13.73□□□□□ -0.21
KNTC1-208ENST00000535410 TAF6LQ9Y6J9 622 aa13.73□□□□□ -0.21
KNTC1-208ENST00000535410 DNAH12Q6ZR08 3092 aa13.72□□□□□ -0.21
KNTC1-208ENST00000535410 SH2B2O14492 632 aaPredicted RBP13.72□□□□□ -0.21
KNTC1-208ENST00000535410 CCND2P30279 289 aa13.72□□□□□ -0.21
KNTC1-208ENST00000535410 SMAD3P84022 425 aaKnown RBP13.72□□□□□ -0.21
KNTC1-208ENST00000535410 TSGA10IPQ3SY00 556 aa13.72□□□□□ -0.21
KNTC1-208ENST00000535410 GNPTABQ3T906 1256 aa13.72□□□□□ -0.21
KNTC1-208ENST00000535410 CCDC62Q6P9F0 684 aa13.72□□□□□ -0.21
KNTC1-208ENST00000535410 DHX32Q7L7V1 743 aaKnown RBP13.72□□□□□ -0.21
KNTC1-208ENST00000535410 VSIG10LQ86VR7 867 aa13.72□□□□□ -0.21
KNTC1-208ENST00000535410 RPUSD2Q8IZ73 545 aaKnown RBP13.72□□□□□ -0.21
KNTC1-208ENST00000535410 PDCD2LQ9BRP1 358 aa13.72□□□□□ -0.21
KNTC1-208ENST00000535410 ALDH8A1Q9H2A2 487 aaPredicted RBP13.72□□□□□ -0.21
KNTC1-208ENST00000535410 SENP2Q9HC62 589 aa13.72□□□□□ -0.21
KNTC1-208ENST00000535410 CYTH3O43739 400 aa13.71□□□□□ -0.21
KNTC1-208ENST00000535410 PPP1R11O60927 126 aaPredicted RBP13.71□□□□□ -0.21
KNTC1-208ENST00000535410 REC8O95072 547 aa13.71□□□□□ -0.21
KNTC1-208ENST00000535410 MYCLP12524 364 aaPredicted RBP13.71□□□□□ -0.21
KNTC1-208ENST00000535410 ITGB8P26012 769 aa13.71□□□□□ -0.21
KNTC1-208ENST00000535410 FGD1P98174 961 aa13.71□□□□□ -0.21
KNTC1-208ENST00000535410 DGKDQ16760 1214 aa13.71□□□□□ -0.21
KNTC1-208ENST00000535410 FAM47CQ5HY64 1035 aa13.71□□□□□ -0.21
KNTC1-208ENST00000535410 XRRA1Q6P2D8 792 aa13.71□□□□□ -0.21
KNTC1-208ENST00000535410 PSRC1Q6PGN9 363 aaPredicted RBP13.71□□□□□ -0.21
KNTC1-208ENST00000535410 SGMS1Q86VZ5 419 aa13.71□□□□□ -0.21
KNTC1-208ENST00000535410 TEX2Q8IWB9 1127 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms