RNA–Protein interactions for RNA: ENST00000534098.1

TTC39A-218, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2

Gene TTC39A, Length 930 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-218ENST00000534098 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
TTC39A-218ENST00000534098 SIP14410 1827 aa13.77□□□□□ -0.21
TTC39A-218ENST00000534098 PPP2R5BQ15173 497 aa13.77□□□□□ -0.21
TTC39A-218ENST00000534098 NFRKBQ6P4R8 1299 aa13.77□□□□□ -0.21
TTC39A-218ENST00000534098 HERC6Q8IVU3 1022 aa13.77□□□□□ -0.21
TTC39A-218ENST00000534098 OTUD7AQ8TE49 926 aaPredicted RBP13.77□□□□□ -0.21
TTC39A-218ENST00000534098 CLEC4DQ8WXI8 215 aa13.77□□□□□ -0.21
TTC39A-218ENST00000534098 ARNTL2Q8WYA1 636 aa13.77□□□□□ -0.21
TTC39A-218ENST00000534098 COG5Q9UP83 839 aa13.77□□□□□ -0.21
TTC39A-218ENST00000534098 FRMPD2Q68DX3 1309 aaPredicted RBP13.76□□□□□ -0.21
TTC39A-218ENST00000534098 RAD50Q92878 1312 aa13.76□□□□□ -0.21
TTC39A-218ENST00000534098 A6NJR5 290 aa13.76□□□□□ -0.21
TTC39A-218ENST00000534098 TLL1O43897 1013 aa13.76□□□□□ -0.21
TTC39A-218ENST00000534098 KPNA6O60684 536 aa13.76□□□□□ -0.21
TTC39A-218ENST00000534098 FGRP09769 529 aa13.76□□□□□ -0.21
TTC39A-218ENST00000534098 EDNRBP24530 442 aa13.76□□□□□ -0.21
TTC39A-218ENST00000534098 CALML3P27482 149 aa13.76□□□□□ -0.21
TTC39A-218ENST00000534098 PTPN11Q06124 597 aaPredicted RBP13.76□□□□□ -0.21
TTC39A-218ENST00000534098 BRDTQ58F21 947 aaPredicted RBP13.76□□□□□ -0.21
TTC39A-218ENST00000534098 RETREG2Q8NC44 543 aa13.76□□□□□ -0.21
TTC39A-218ENST00000534098 SCFD2Q8WU76 684 aa13.76□□□□□ -0.21
TTC39A-218ENST00000534098 COPS5Q92905 334 aa13.76□□□□□ -0.21
TTC39A-218ENST00000534098 GPCPD1Q9NPB8 672 aa13.76□□□□□ -0.21
TTC39A-218ENST00000534098 U3KPZ7 1027 aaPredicted RBP13.76□□□□□ -0.21
TTC39A-218ENST00000534098 KIF28PB7ZC32 967 aa13.75□□□□□ -0.21
TTC39A-218ENST00000534098 LPXNO60711 386 aa13.75□□□□□ -0.21
TTC39A-218ENST00000534098 BAIAP3O94812 1187 aa13.75□□□□□ -0.21
TTC39A-218ENST00000534098 TOP1P11387 765 aaKnown RBP13.75□□□□□ -0.21
TTC39A-218ENST00000534098 RPS6P62753 249 aaKnown RBP13.75□□□□□ -0.21
TTC39A-218ENST00000534098 PDE4DQ08499 809 aa13.75□□□□□ -0.21
TTC39A-218ENST00000534098 GRB10Q13322 594 aa13.75□□□□□ -0.21
TTC39A-218ENST00000534098 BFSP2Q13515 415 aa13.75□□□□□ -0.21
TTC39A-218ENST00000534098 VPS53Q5VIR6 699 aa13.75□□□□□ -0.21
TTC39A-218ENST00000534098 RNF207Q6ZRF8 634 aa13.75□□□□□ -0.21
TTC39A-218ENST00000534098 SPRED2Q7Z698 418 aa13.75□□□□□ -0.21
TTC39A-218ENST00000534098 DNERQ8NFT8 737 aa13.75□□□□□ -0.21
TTC39A-218ENST00000534098 TMEM47Q9BQJ4 181 aa13.75□□□□□ -0.21
TTC39A-218ENST00000534098 FTOQ9C0B1 505 aaKnown RBP eCLIP13.75□□□□□ -0.21
TTC39A-218ENST00000534098 EPHX3Q9H6B9 360 aa13.75□□□□□ -0.21
TTC39A-218ENST00000534098 WDR19Q8NEZ3 1342 aa13.74□□□□□ -0.21
TTC39A-218ENST00000534098 ARIH2O95376 493 aa13.74□□□□□ -0.21
TTC39A-218ENST00000534098 PDHBP11177 359 aa13.74□□□□□ -0.21
TTC39A-218ENST00000534098 ALX1Q15699 326 aa13.74□□□□□ -0.21
TTC39A-218ENST00000534098 HLA-CQ95604 372 aa13.74□□□□□ -0.21
TTC39A-218ENST00000534098 CTAGE1Q96RT6 745 aa13.74□□□□□ -0.21
TTC39A-218ENST00000534098 LRFN3Q9BTN0 628 aa13.74□□□□□ -0.21
TTC39A-218ENST00000534098 TCP11L1Q9NUJ3 509 aa13.74□□□□□ -0.21
TTC39A-218ENST00000534098 PNMA2Q9UL42 364 aa13.74□□□□□ -0.21
TTC39A-218ENST00000534098 SALL3Q9BXA9 1300 aa13.73□□□□□ -0.21
TTC39A-218ENST00000534098 TXNP10599 105 aaKnown RBP13.73□□□□□ -0.21
TTC39A-218ENST00000534098 MX1P20591 662 aa13.73□□□□□ -0.21
TTC39A-218ENST00000534098 ZNF543Q08ER8 600 aa13.73□□□□□ -0.21
TTC39A-218ENST00000534098 GPNMBQ14956 572 aa13.73□□□□□ -0.21
TTC39A-218ENST00000534098 CAGE1Q8TC20 777 aa13.73□□□□□ -0.21
TTC39A-218ENST00000534098 MPHOSPH6Q99547 160 aaKnown RBP13.73□□□□□ -0.21
TTC39A-218ENST00000534098 TOMM22Q9NS69 142 aa13.73□□□□□ -0.21
TTC39A-218ENST00000534098 NOD1Q9Y239 953 aa13.73□□□□□ -0.21
TTC39A-218ENST00000534098 ARIH1Q9Y4X5 557 aaPredicted RBP13.73□□□□□ -0.21
TTC39A-218ENST00000534098 MICAL3Q7RTP6 2002 aa13.73□□□□□ -0.21
TTC39A-218ENST00000534098 LCHNA4D1U4 455 aa13.72□□□□□ -0.21
TTC39A-218ENST00000534098 SNHG28P0DPA3 235 aa13.72□□□□□ -0.21
TTC39A-218ENST00000534098 KCNJ6P48051 423 aa13.72□□□□□ -0.21
TTC39A-218ENST00000534098 WDR5P61964 334 aaKnown RBP13.72□□□□□ -0.21
TTC39A-218ENST00000534098 PTGISQ16647 500 aa13.72□□□□□ -0.21
TTC39A-218ENST00000534098 RRP12Q5JTH9 1297 aaKnown RBP13.72□□□□□ -0.21
TTC39A-218ENST00000534098 CCDC62Q6P9F0 684 aa13.72□□□□□ -0.21
TTC39A-218ENST00000534098 SESTD1Q86VW0 696 aa13.72□□□□□ -0.21
TTC39A-218ENST00000534098 CCDC155Q8N6L0 562 aa13.72□□□□□ -0.21
TTC39A-218ENST00000534098 AFAP1L1Q8TED9 768 aa13.72□□□□□ -0.21
TTC39A-218ENST00000534098 KHSRPQ92945 711 aaKnown RBP eCLIP13.72□□□□□ -0.21
TTC39A-218ENST00000534098 LAMA4Q16363 1823 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 B4DLN1 442 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 FGAP02671 866 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 MMP3P08254 477 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 MRPL12P52815 198 aaKnown RBP13.71□□□□□ -0.21
TTC39A-218ENST00000534098 DEFB103AP81534 67 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 RBL2Q08999 1139 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 TMEM31Q5JXX7 168 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 GDF6Q6KF10 455 aaPredicted RBP13.71□□□□□ -0.21
TTC39A-218ENST00000534098 TMCO2Q7Z6W1 182 aaPredicted RBP13.71□□□□□ -0.21
TTC39A-218ENST00000534098 GDPD5Q8WTR4 605 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 AFG1LQ8WV93 481 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 DHX38Q92620 1227 aaKnown RBP13.71□□□□□ -0.21
TTC39A-218ENST00000534098 KAT2BQ92831 832 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 C11orf16Q9NQ32 467 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 LMCD1Q9NZU5 365 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 HCN4Q9Y3Q4 1203 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 PCDHB15Q9Y5E8 787 aa13.71□□□□□ -0.21
TTC39A-218ENST00000534098 ZMYM6O95789 1325 aa13.7□□□□□ -0.22
TTC39A-218ENST00000534098 MUC6Q6W4X9 2439 aa13.7□□□□□ -0.22
TTC39A-218ENST00000534098 SELPP16109 830 aa13.7□□□□□ -0.22
TTC39A-218ENST00000534098 CHMP4BP1P59074 171 aa13.7□□□□□ -0.22
TTC39A-218ENST00000534098 ARHGAP1Q07960 439 aa13.7□□□□□ -0.22
TTC39A-218ENST00000534098 USH1GQ495M9 461 aa13.7□□□□□ -0.22
TTC39A-218ENST00000534098 CNKSR3Q6P9H4 555 aa13.7□□□□□ -0.22
TTC39A-218ENST00000534098 LRRC8DQ7L1W4 858 aa13.7□□□□□ -0.22
TTC39A-218ENST00000534098 RGS22Q8NE09 1264 aa13.7□□□□□ -0.22
TTC39A-218ENST00000534098 TTC14Q96N46 770 aa13.7□□□□□ -0.22
TTC39A-218ENST00000534098 HELLSQ9NRZ9 838 aa13.7□□□□□ -0.22
TTC39A-218ENST00000534098 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms