RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 P4HA2O15460 535 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 PPFIA2O75334 1257 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 CLCN2P51788 898 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 ILF2Q12905 390 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 LIN9Q5TKA1 542 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 SLC30A9Q6PML9 568 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 RPUSD2Q8IZ73 545 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 IFT81Q8WYA0 676 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 DHX38Q92620 1227 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 WDR24Q96S15 920 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 ISCUQ9H1K1 167 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 COL4A3BPQ9Y5P4 624 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 TNKSO95271 1327 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 MACROD2A1Z1Q3 448 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 RASSF10A6NK89 507 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 ORC4O43929 436 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 SHOX2O60902 331 aaPredicted RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 MBD4O95243 580 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 SSBP05455 408 aaKnown RBP eCLIP4.43□□□□□ -1.7
SOX6-217ENST00000533870 SNX16P57768 344 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 HAND2P61296 217 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 RBL2Q08999 1139 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 PNOCQ13519 176 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 MEA1Q16626 185 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 KRT39Q6A163 491 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 UNC13DQ70J99 1090 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 NEK8Q86SG6 692 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 SSX2IPQ9Y2D8 614 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 ARL2BPQ9Y2Y0 163 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 JCADQ9P266 1359 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 PJA2O43164 708 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 TNFAIP3P21580 790 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 YY1P25490 414 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 SKIV2L2P42285 1042 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 ATP2C1P98194 919 aaPredicted RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 PDIA5Q14554 519 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 PTPAQ15257 358 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 IFNL3Q8IZI9 196 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 REXO1Q8N1G1 1221 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 PLCD3Q8N3E9 789 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 XPO6Q96QU8 1125 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 SYNCQ9H7C4 482 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 NCOA5Q9HCD5 579 aaKnown RBP4.43□□□□□ -1.7
SOX6-217ENST00000533870 NDE1Q9NXR1 346 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 ERBB3P21860 1342 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 SALL1Q9NSC2 1324 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 PREX2Q70Z35 1606 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 MAP3K4Q9Y6R4 1608 aa4.43□□□□□ -1.7
SOX6-217ENST00000533870 A0A1W2PRG0 241 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 ERVV-1B6SEH8 477 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 AHCYL1O43865 530 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 CDH16O75309 829 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 VIMP08670 466 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 KIF11P52732 1056 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 TMC4Q7Z404 712 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 CABP7Q86V35 215 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 MAB21L3Q8N8X9 362 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 CCDC89Q8N998 374 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 DAGLBQ8NCG7 672 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 ZNF496Q96IT1 587 aaPredicted RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 SH3GL2Q99962 352 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 V9GY48 417 aaPredicted RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 CYP7A1P22680 504 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 ADD1P35611 737 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 NAPAP54920 295 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 GUCY2DQ02846 1103 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 ZBTB16Q05516 673 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 DHX9Q08211 1270 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 TMED1Q13445 227 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 TCP11X2Q5H9J9 407 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 HHATQ5VTY9 493 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 FBXO31Q5XUX0 539 aaPredicted RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 CENPUQ71F23 418 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 DAAM2Q86T65 1068 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 METTL16Q86W50 562 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 FAM89AQ96GI7 184 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 CCT8L2Q96SF2 557 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 LRRC2Q9BYS8 371 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 TMEM60Q9H2L4 133 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 UBN1Q9NPG3 1134 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 RNF216Q9NWF9 866 aaPredicted RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 PCDHB13Q9Y5F0 798 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 EXOC5O00471 708 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 PDE8BO95263 885 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 CNGA1P29973 690 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 PHBP35232 272 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 TBCCQ15814 346 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 TCERG1LQ5VWI1 586 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 TMTC3Q6ZXV5 915 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 VPS52Q8N1B4 723 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 PAGE5Q96GU1 130 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 ZHX2Q9Y6X8 837 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 KRIT1O00522 736 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 SPAG6O75602 509 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 CHGBP05060 677 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 HLA-DOAP06340 250 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 XRCC5P13010 732 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 ACTN3Q08043 901 aaPredicted RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 IFT88Q13099 833 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 CUL3Q13618 768 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms