RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 VTA1Q9NP79 307 aa22.79■■□□□ 1.24
CHEK1-215ENST00000533778 PXMP2Q9NR77 195 aa22.79■■□□□ 1.24
CHEK1-215ENST00000533778 COL20A1Q9P218 1284 aa22.79■■□□□ 1.24
CHEK1-215ENST00000533778 SMCO2A6NFE2 343 aa22.78■■□□□ 1.24
CHEK1-215ENST00000533778 CAPN15O75808 1086 aa22.78■■□□□ 1.24
CHEK1-215ENST00000533778 EDNRBP24530 442 aa22.78■■□□□ 1.24
CHEK1-215ENST00000533778 ADCY7P51828 1080 aa22.78■■□□□ 1.24
CHEK1-215ENST00000533778 NECAB1Q8N987 351 aa22.78■■□□□ 1.24
CHEK1-215ENST00000533778 CCDC148Q8NFR7 591 aa22.78■■□□□ 1.24
CHEK1-215ENST00000533778 RIC8AQ9NPQ8 531 aa22.78■■□□□ 1.24
CHEK1-215ENST00000533778 SH3GLB2Q9NR46 395 aa22.78■■□□□ 1.24
CHEK1-215ENST00000533778 POTEFA5A3E0 1075 aa22.77■■□□□ 1.24
CHEK1-215ENST00000533778 MEIS2O14770 477 aa22.77■■□□□ 1.24
CHEK1-215ENST00000533778 STXBP2Q15833 593 aa22.77■■□□□ 1.24
CHEK1-215ENST00000533778 USP17L6PQ6QN14 398 aa22.77■■□□□ 1.24
CHEK1-215ENST00000533778 FAM177A1Q8N128 213 aaPredicted RBP22.77■■□□□ 1.24
CHEK1-215ENST00000533778 WASF1Q92558 559 aa22.77■■□□□ 1.24
CHEK1-215ENST00000533778 CRISPLD2Q9H0B8 497 aa22.77■■□□□ 1.24
CHEK1-215ENST00000533778 C6orf50Q9HD87 102 aa22.77■■□□□ 1.24
CHEK1-215ENST00000533778 ESYT2A0FGR8 921 aa22.76■■□□□ 1.23
CHEK1-215ENST00000533778 PPFIA3O75145 1194 aa22.76■■□□□ 1.23
CHEK1-215ENST00000533778 LARGE1O95461 756 aa22.76■■□□□ 1.23
CHEK1-215ENST00000533778 RARBP10826 455 aa22.76■■□□□ 1.23
CHEK1-215ENST00000533778 EIF2AK2P19525 551 aaKnown RBP22.76■■□□□ 1.23
CHEK1-215ENST00000533778 GNA11P29992 359 aa22.76■■□□□ 1.23
CHEK1-215ENST00000533778 LHX8Q68G74 356 aa22.76■■□□□ 1.23
CHEK1-215ENST00000533778 KATNBL1Q9H079 304 aa22.76■■□□□ 1.23
CHEK1-215ENST00000533778 EHMT1Q9H9B1 1298 aa22.76■■□□□ 1.23
CHEK1-215ENST00000533778 ZNFX1Q9P2E3 1918 aaKnown RBP22.76■■□□□ 1.23
CHEK1-215ENST00000533778 STK36Q9NRP7 1315 aa22.76■■□□□ 1.23
CHEK1-215ENST00000533778 BAZ2BQ9UIF8 2168 aaKnown RBP22.76■■□□□ 1.23
CHEK1-215ENST00000533778 SPDYE3A6NKU9 549 aa22.75■■□□□ 1.23
CHEK1-215ENST00000533778 EIF3JO75822 258 aaKnown RBP22.75■■□□□ 1.23
CHEK1-215ENST00000533778 FOSP01100 380 aaPredicted RBP22.75■■□□□ 1.23
CHEK1-215ENST00000533778 NR3C2P08235 984 aa22.75■■□□□ 1.23
CHEK1-215ENST00000533778 XBP1P17861 261 aa22.75■■□□□ 1.23
CHEK1-215ENST00000533778 EN2P19622 333 aaPredicted RBP22.75■■□□□ 1.23
CHEK1-215ENST00000533778 CCDC144BQ3MJ40 725 aa22.75■■□□□ 1.23
CHEK1-215ENST00000533778 MCTP2Q6DN12 878 aa22.75■■□□□ 1.23
CHEK1-215ENST00000533778 IQSEC1Q6DN90 963 aa22.75■■□□□ 1.23
CHEK1-215ENST00000533778 TYW1BQ6NUM6 668 aa22.75■■□□□ 1.23
CHEK1-215ENST00000533778 EEPD1Q7L9B9 569 aa22.75■■□□□ 1.23
CHEK1-215ENST00000533778 BICD2Q8TD16 824 aa22.75■■□□□ 1.23
CHEK1-215ENST00000533778 PDCD2LQ9BRP1 358 aa22.75■■□□□ 1.23
CHEK1-215ENST00000533778 ZMYND12Q9H0C1 365 aa22.75■■□□□ 1.23
CHEK1-215ENST00000533778 OGDHLQ9ULD0 1010 aa22.75■■□□□ 1.23
CHEK1-215ENST00000533778 XRRA1Q6P2D8 792 aa22.74■■□□□ 1.23
CHEK1-215ENST00000533778 FBXO16Q8IX29 292 aaPredicted RBP22.74■■□□□ 1.23
CHEK1-215ENST00000533778 ANKLE1Q8NAG6 615 aa22.74■■□□□ 1.23
CHEK1-215ENST00000533778 LLPHQ9BRT6 129 aaKnown RBP22.74■■□□□ 1.23
CHEK1-215ENST00000533778 ORC3Q9UBD5 711 aaPredicted RBP22.74■■□□□ 1.23
CHEK1-215ENST00000533778 SMCHD1A6NHR9 2005 aa22.74■■□□□ 1.23
CHEK1-215ENST00000533778 CTDNEP1O95476 244 aa22.73■■□□□ 1.23
CHEK1-215ENST00000533778 CCND2P30279 289 aa22.73■■□□□ 1.23
CHEK1-215ENST00000533778 TNFAIP2Q03169 654 aa22.73■■□□□ 1.23
CHEK1-215ENST00000533778 PGM5Q15124 567 aa22.73■■□□□ 1.23
CHEK1-215ENST00000533778 IFFO2Q5TF58 517 aa22.73■■□□□ 1.23
CHEK1-215ENST00000533778 VSIG10LQ86VR7 867 aa22.73■■□□□ 1.23
CHEK1-215ENST00000533778 ARRDC4Q8NCT1 418 aa22.73■■□□□ 1.23
CHEK1-215ENST00000533778 DUSP11O75319 330 aaKnown RBP22.72■■□□□ 1.23
CHEK1-215ENST00000533778 STAM2O75886 525 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 MYCLP12524 364 aaPredicted RBP22.72■■□□□ 1.23
CHEK1-215ENST00000533778 NLRP5P59047 1200 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 AP3B2Q13367 1082 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 UBE2SQ16763 222 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 GALNT17Q6IS24 598 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 TAPT1Q6NXT6 567 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 NSUN7Q8NE18 718 aaKnown RBP22.72■■□□□ 1.23
CHEK1-215ENST00000533778 SCFD2Q8WU76 684 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 SPC25Q9HBM1 224 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 VPS54Q9P1Q0 977 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 PCDHA6Q9UN73 950 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 PCDHA8Q9Y5H6 950 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 DDX49Q9Y6V7 483 aaKnown RBP22.72■■□□□ 1.23
CHEK1-215ENST00000533778 FRMPD4Q14CM0 1322 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 PLXNA1Q9UIW2 1896 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 MYH6P13533 1939 aa22.72■■□□□ 1.23
CHEK1-215ENST00000533778 RBM47A0AV96 593 aaKnown RBP22.71■■□□□ 1.23
CHEK1-215ENST00000533778 CCDC83Q8IWF9 413 aa22.71■■□□□ 1.23
CHEK1-215ENST00000533778 SHISA4Q96DD7 197 aa22.71■■□□□ 1.23
CHEK1-215ENST00000533778 XPNPEP3Q9NQH7 507 aa22.71■■□□□ 1.23
CHEK1-215ENST00000533778 ADCYAP1R1P41586 468 aa22.7■■□□□ 1.22
CHEK1-215ENST00000533778 TTLL4Q14679 1199 aa22.7■■□□□ 1.22
CHEK1-215ENST00000533778 ANO1Q5XXA6 986 aa22.7■■□□□ 1.22
CHEK1-215ENST00000533778 PCNX4Q63HM2 1172 aa22.7■■□□□ 1.22
CHEK1-215ENST00000533778 KCNV1Q6PIU1 500 aa22.7■■□□□ 1.22
CHEK1-215ENST00000533778 RNF180Q86T96 592 aa22.7■■□□□ 1.22
CHEK1-215ENST00000533778 REXO1Q8N1G1 1221 aaKnown RBP22.7■■□□□ 1.22
CHEK1-215ENST00000533778 WDR11Q9BZH6 1224 aa22.7■■□□□ 1.22
CHEK1-215ENST00000533778 PDGFCQ9NRA1 345 aa22.7■■□□□ 1.22
CHEK1-215ENST00000533778 Q9Y3F1 56 aa22.7■■□□□ 1.22
CHEK1-215ENST00000533778 NKRFO15226 690 aaKnown RBP eCLIP22.69■■□□□ 1.22
CHEK1-215ENST00000533778 CLK2P49760 499 aaKnown RBP22.69■■□□□ 1.22
CHEK1-215ENST00000533778 GNPTABQ3T906 1256 aa22.69■■□□□ 1.22
CHEK1-215ENST00000533778 DUSP28Q4G0W2 176 aa22.69■■□□□ 1.22
CHEK1-215ENST00000533778 SEPT14Q6ZU15 432 aa22.69■■□□□ 1.22
CHEK1-215ENST00000533778 CENPFP49454 3210 aa22.69■■□□□ 1.22
CHEK1-215ENST00000533778 FARP2O94887 1054 aaPredicted RBP22.68■■□□□ 1.22
CHEK1-215ENST00000533778 SMPD1P17405 629 aa22.68■■□□□ 1.22
CHEK1-215ENST00000533778 RGS19P49795 217 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms