RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 KPNA6O60684 536 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 EIF3JO75822 258 aaKnown RBP12.72□□□□□ -0.37
CAPN1-221ENST00000531068 CFBP00751 764 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 RAG1P15918 1043 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 CPT1AP50416 773 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 GHRHRQ02643 423 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 KRT32Q14532 448 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 TTLL4Q14679 1199 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 PPP2R5BQ15173 497 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 TSGA10IPQ3SY00 556 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 SYNE3Q6ZMZ3 975 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 HOMER1Q86YM7 354 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 ZNF654Q8IZM8 581 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 KCNB2Q92953 911 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 TRIM43Q96BQ3 446 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-221ENST00000531068 TAAR1Q96RJ0 339 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 PIGSQ96S52 555 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 C22orf23Q9BZE7 217 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 GPHNQ9NQX3 736 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-221ENST00000531068 POLR3EQ9NVU0 708 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 SLC12A7Q9Y666 1083 aa12.72□□□□□ -0.37
CAPN1-221ENST00000531068 DDX49Q9Y6V7 483 aaKnown RBP12.72□□□□□ -0.37
CAPN1-221ENST00000531068 MYH4Q9Y623 1939 aa12.71□□□□□ -0.37
CAPN1-221ENST00000531068 GCOM1H8Y6P7 765 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-221ENST00000531068 SH2B2O14492 632 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-221ENST00000531068 REC8O95072 547 aa12.71□□□□□ -0.37
CAPN1-221ENST00000531068 HMGB1P09429 215 aaKnown RBP12.71□□□□□ -0.37
CAPN1-221ENST00000531068 POLR2MP0CAP2 368 aa12.71□□□□□ -0.37
CAPN1-221ENST00000531068 TXNP10599 105 aaKnown RBP12.71□□□□□ -0.37
CAPN1-221ENST00000531068 HSD17B4P51659 736 aa12.71□□□□□ -0.37
CAPN1-221ENST00000531068 IRX5P78411 483 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-221ENST00000531068 FAAP100Q0VG06 881 aa12.71□□□□□ -0.37
CAPN1-221ENST00000531068 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
CAPN1-221ENST00000531068 CXCL17Q6UXB2 119 aa12.71□□□□□ -0.37
CAPN1-221ENST00000531068 SH3RF1Q7Z6J0 888 aa12.71□□□□□ -0.37
CAPN1-221ENST00000531068 OR6J1Q8NGC5 347 aa12.71□□□□□ -0.37
CAPN1-221ENST00000531068 BADQ92934 168 aa12.71□□□□□ -0.37
CAPN1-221ENST00000531068 RRP36Q96EU6 259 aaKnown RBP12.71□□□□□ -0.37
CAPN1-221ENST00000531068 NEK1Q96PY6 1258 aa12.71□□□□□ -0.37
CAPN1-221ENST00000531068 PCDH10Q9P2E7 1040 aa12.71□□□□□ -0.37
CAPN1-221ENST00000531068 SEC63Q9UGP8 760 aaKnown RBP12.71□□□□□ -0.37
CAPN1-221ENST00000531068 CYTH3O43739 400 aa12.7□□□□□ -0.38
CAPN1-221ENST00000531068 PPP1R11O60927 126 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-221ENST00000531068 NR3C2P08235 984 aa12.7□□□□□ -0.38
CAPN1-221ENST00000531068 ITGA7Q13683 1181 aa12.7□□□□□ -0.38
CAPN1-221ENST00000531068 DHX32Q7L7V1 743 aaKnown RBP12.7□□□□□ -0.38
CAPN1-221ENST00000531068 SLC43A3Q8NBI5 491 aa12.7□□□□□ -0.38
CAPN1-221ENST00000531068 SPZ1Q9BXG8 430 aa12.7□□□□□ -0.38
CAPN1-221ENST00000531068 UPF2Q9HAU5 1272 aaKnown RBP12.7□□□□□ -0.38
CAPN1-221ENST00000531068 PXMP2Q9NR77 195 aa12.7□□□□□ -0.38
CAPN1-221ENST00000531068 PARP14Q460N5 1801 aa12.69□□□□□ -0.38
CAPN1-221ENST00000531068 TIMP1P01033 207 aa12.69□□□□□ -0.38
CAPN1-221ENST00000531068 EIF2AK2P19525 551 aaKnown RBP12.69□□□□□ -0.38
CAPN1-221ENST00000531068 SLC35G1Q2M3R5 365 aa12.69□□□□□ -0.38
CAPN1-221ENST00000531068 TMEM63BQ5T3F8 832 aa12.69□□□□□ -0.38
CAPN1-221ENST00000531068 KCNV1Q6PIU1 500 aa12.69□□□□□ -0.38
CAPN1-221ENST00000531068 SEPT14Q6ZU15 432 aa12.69□□□□□ -0.38
CAPN1-221ENST00000531068 FANCBQ8NB91 859 aa12.69□□□□□ -0.38
CAPN1-221ENST00000531068 MTG1Q9BT17 334 aaPredicted RBP12.69□□□□□ -0.38
CAPN1-221ENST00000531068 COL20A1Q9P218 1284 aa12.69□□□□□ -0.38
CAPN1-221ENST00000531068 COL11A1P12107 1806 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-221ENST00000531068 A6NJR5 290 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 OPLAHO14841 1288 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 GH1P01241 217 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 MYL3P08590 195 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 SUPT20HL2P0C7V6 817 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 HOXA13P31271 388 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-221ENST00000531068 HSPA4P34932 840 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 EXOSC10Q01780 885 aaKnown RBP12.68□□□□□ -0.38
CAPN1-221ENST00000531068 FPGSQ05932 587 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 CCDC62Q6P9F0 684 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 VSIG10LQ86VR7 867 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 SGMS1Q86VZ5 419 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 FAM126BQ8IXS8 530 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 PIBF1Q8WXW3 757 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 CUL5Q93034 780 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 MYL10Q9BUA6 226 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 TBX21Q9UL17 535 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 CEP290O15078 2479 aa12.68□□□□□ -0.38
CAPN1-221ENST00000531068 CD4P01730 458 aa12.67□□□□□ -0.38
CAPN1-221ENST00000531068 TGFB3P10600 412 aa12.67□□□□□ -0.38
CAPN1-221ENST00000531068 MYCLP12524 364 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-221ENST00000531068 FGD1P98174 961 aa12.67□□□□□ -0.38
CAPN1-221ENST00000531068 PURAQ00577 322 aaKnown RBP12.67□□□□□ -0.38
CAPN1-221ENST00000531068 LAMC2Q13753 1193 aa12.67□□□□□ -0.38
CAPN1-221ENST00000531068 MFSD5Q6N075 450 aa12.67□□□□□ -0.38
CAPN1-221ENST00000531068 FCHSD1Q86WN1 690 aa12.67□□□□□ -0.38
CAPN1-221ENST00000531068 TMEM199Q8N511 208 aa12.67□□□□□ -0.38
CAPN1-221ENST00000531068 SRBD1Q8N5C6 995 aaKnown RBP12.67□□□□□ -0.38
CAPN1-221ENST00000531068 PDCD2LQ9BRP1 358 aa12.67□□□□□ -0.38
CAPN1-221ENST00000531068 LRRC2Q9BYS8 371 aa12.67□□□□□ -0.38
CAPN1-221ENST00000531068 RBM28Q9NW13 759 aaKnown RBP12.67□□□□□ -0.38
CAPN1-221ENST00000531068 MRVI1Q9Y6F6 885 aa12.67□□□□□ -0.38
CAPN1-221ENST00000531068 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-221ENST00000531068 CASTP20810 708 aaKnown RBP12.66□□□□□ -0.38
CAPN1-221ENST00000531068 PTGS1P23219 599 aa12.66□□□□□ -0.38
CAPN1-221ENST00000531068 ITGB8P26012 769 aa12.66□□□□□ -0.38
CAPN1-221ENST00000531068 CCND2P30279 289 aa12.66□□□□□ -0.38
CAPN1-221ENST00000531068 PSMC6P62333 389 aa12.66□□□□□ -0.38
CAPN1-221ENST00000531068 PPIGQ13427 754 aaKnown RBP eCLIP12.66□□□□□ -0.383e-6■■■□□ 18.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms