RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 MUC3AQ02505 3323 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 PATL2C9JE40 543 aaKnown RBP10.66□□□□□ -0.7
VPS11-203ENST00000529545 RNF113AO15541 343 aaKnown RBP10.66□□□□□ -0.7
VPS11-203ENST00000529545 GPAA1O43292 621 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 PLA2G6O60733 806 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 MCCP23508 829 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 HNRNPUQ00839 825 aaKnown RBP eCLIP10.66□□□□□ -0.7
VPS11-203ENST00000529545 TFAP4Q01664 338 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 BFSP2Q13515 415 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 SIRT2Q8IXJ6 389 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 KBTBD3Q8NAB2 608 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 OSBP2Q969R2 916 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 MPHOSPH6Q99547 160 aaKnown RBP10.66□□□□□ -0.7
VPS11-203ENST00000529545 MTG1Q9BT17 334 aaPredicted RBP10.66□□□□□ -0.7
VPS11-203ENST00000529545 CYP39A1Q9NYL5 469 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 CCPG1Q9ULG6 757 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 NOD1Q9Y239 953 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 LRRC37A2A6NM11 1700 aa10.66□□□□□ -0.7
VPS11-203ENST00000529545 PLIN4Q96Q06 1357 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 PRRC2BQ5JSZ5 2229 aaKnown RBP10.65□□□□□ -0.7
VPS11-203ENST00000529545 LOC102724159A0A0B4J2E5 919 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 TLL1O43897 1013 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 KPNA6O60684 536 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 PTGS1P23219 599 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 KCNJ6P48051 423 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 FOXK1P85037 733 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 PURAQ00577 322 aaKnown RBP10.65□□□□□ -0.7
VPS11-203ENST00000529545 TAP1Q03518 808 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 PWP2Q15269 919 aaKnown RBP10.65□□□□□ -0.7
VPS11-203ENST00000529545 MUM1L1Q5H9M0 696 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 RCSD1Q6JBY9 416 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 HERC6Q8IVU3 1022 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 IFNL3Q8IZI9 196 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 CHMP4CQ96CF2 233 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 WDR11Q9BZH6 1224 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 ZBTB40Q9NUA8 1239 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 STX8Q9UNK0 236 aa10.65□□□□□ -0.7
VPS11-203ENST00000529545 PTPDC1A2A3K4 754 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 NKRFO15226 690 aaKnown RBP eCLIP10.64□□□□□ -0.71
VPS11-203ENST00000529545 GPR37L1O60883 481 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 BAIAP3O94812 1187 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 IQCF3P0C7M6 154 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 PTPN11Q06124 597 aaPredicted RBP10.64□□□□□ -0.71
VPS11-203ENST00000529545 CCDC96Q2M329 555 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 NBPF20Q3BBV1 942 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 NFRKBQ6P4R8 1299 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 KCTD1Q719H9 257 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 CCDC155Q8N6L0 562 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 OR6J1Q8NGC5 347 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 MORC4Q8TE76 937 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 VWCEQ96DN2 955 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 ZBED2Q9BTP6 218 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 NAPBQ9H115 298 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 EPB41L4AQ9HCS5 686 aaPredicted RBP10.64□□□□□ -0.71
VPS11-203ENST00000529545 PRR12Q9ULL5 1215 aa10.64□□□□□ -0.71
VPS11-203ENST00000529545 DDX49Q9Y6V7 483 aaKnown RBP10.64□□□□□ -0.71
VPS11-203ENST00000529545 SCN5AQ14524 2016 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 CHD7Q9P2D1 2997 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 TRANK1O15050 2925 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 EPOPA6NHQ4 379 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 TSPY2A6NKD2 308 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 B4DLN1 442 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 SMARCA5O60264 1052 aaPredicted RBP10.63□□□□□ -0.71
VPS11-203ENST00000529545 ICAM1P05362 532 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 MRPL12P52815 198 aaKnown RBP10.63□□□□□ -0.71
VPS11-203ENST00000529545 SNAP25P60880 206 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 PPARAQ07869 468 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 PDE4DQ08499 809 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 GRB10Q13322 594 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 BAATQ14032 418 aaPredicted RBP10.63□□□□□ -0.71
VPS11-203ENST00000529545 PPP2R5BQ15173 497 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 TMEM63BQ5T3F8 832 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 KRT40Q6A162 431 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 LMCD1Q9NZU5 365 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 PNMA2Q9UL42 364 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 MTMR7Q9Y216 660 aa10.63□□□□□ -0.71
VPS11-203ENST00000529545 M0R2C6 588 aa10.62□□□□□ -0.71
VPS11-203ENST00000529545 ALDH5A1P51649 535 aaPredicted RBP10.62□□□□□ -0.71
VPS11-203ENST00000529545 CHMP4BP1P59074 171 aa10.62□□□□□ -0.71
VPS11-203ENST00000529545 ARSIQ5FYB1 569 aa10.62□□□□□ -0.71
VPS11-203ENST00000529545 SCFD2Q8WU76 684 aa10.62□□□□□ -0.71
VPS11-203ENST00000529545 PURBQ96QR8 312 aaKnown RBP10.62□□□□□ -0.71
VPS11-203ENST00000529545 TANC1Q9C0D5 1861 aa10.61□□□□□ -0.71
VPS11-203ENST00000529545 RBM47A0AV96 593 aaKnown RBP10.61□□□□□ -0.71
VPS11-203ENST00000529545 PARNO95453 639 aaKnown RBP10.61□□□□□ -0.71
VPS11-203ENST00000529545 CALML3P27482 149 aa10.61□□□□□ -0.71
VPS11-203ENST00000529545 RNF207Q6ZRF8 634 aa10.61□□□□□ -0.71
VPS11-203ENST00000529545 CAGE1Q8TC20 777 aa10.61□□□□□ -0.71
VPS11-203ENST00000529545 AFAP1L1Q8TED9 768 aa10.61□□□□□ -0.71
VPS11-203ENST00000529545 DCAF4Q8WV16 495 aa10.61□□□□□ -0.71
VPS11-203ENST00000529545 CRBNQ96SW2 442 aa10.61□□□□□ -0.71
VPS11-203ENST00000529545 RANBP17Q9H2T7 1088 aaKnown RBP10.61□□□□□ -0.71
VPS11-203ENST00000529545 RTN4Q9NQC3 1192 aaKnown RBP10.61□□□□□ -0.71
VPS11-203ENST00000529545 SCN10AQ9Y5Y9 1956 aa10.6□□□□□ -0.71
VPS11-203ENST00000529545 FAM86C2PA6NEL3 165 aa10.6□□□□□ -0.71
VPS11-203ENST00000529545 A6NJR5 290 aa10.6□□□□□ -0.71
VPS11-203ENST00000529545 PI4K2BG5E9Z4 385 aa10.6□□□□□ -0.71
VPS11-203ENST00000529545 NFIBO00712 420 aa10.6□□□□□ -0.71
VPS11-203ENST00000529545 RANBP6O60518 1105 aaKnown RBP10.6□□□□□ -0.71
VPS11-203ENST00000529545 LPXNO60711 386 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms