RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-213ENST00000529371 AIFM3Q96NN9 605 aa28.57■■■□□ 2.16
LTBP3-213ENST00000529371 ZMYND12Q9H0C1 365 aa28.57■■■□□ 2.16
LTBP3-213ENST00000529371 EHMT1Q9H9B1 1298 aa28.57■■■□□ 2.16
LTBP3-213ENST00000529371 LCTP09848 1927 aa28.56■■■□□ 2.16
LTBP3-213ENST00000529371 PDE4DQ08499 809 aa28.56■■■□□ 2.16
LTBP3-213ENST00000529371 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.56■■■□□ 2.16
LTBP3-213ENST00000529371 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.56■■■□□ 2.16
LTBP3-213ENST00000529371 MEIS2O14770 477 aa28.55■■■□□ 2.16
LTBP3-213ENST00000529371 FDPSP14324 419 aaKnown RBP28.55■■■□□ 2.16
LTBP3-213ENST00000529371 EIF2AK2P19525 551 aaKnown RBP28.55■■■□□ 2.16
LTBP3-213ENST00000529371 TRIM32Q13049 653 aa28.55■■■□□ 2.16
LTBP3-213ENST00000529371 PXMP2Q9NR77 195 aa28.55■■■□□ 2.16
LTBP3-213ENST00000529371 ASTN1O14525 1302 aa28.54■■■□□ 2.16
LTBP3-213ENST00000529371 MYCP01106 439 aaPredicted RBP28.54■■■□□ 2.16
LTBP3-213ENST00000529371 CACNB2Q08289 660 aaPredicted RBP28.54■■■□□ 2.16
LTBP3-213ENST00000529371 MCTP2Q6DN12 878 aa28.54■■■□□ 2.16
LTBP3-213ENST00000529371 GALNT17Q6IS24 598 aa28.54■■■□□ 2.16
LTBP3-213ENST00000529371 REXO1Q8N1G1 1221 aaKnown RBP28.54■■■□□ 2.16
LTBP3-213ENST00000529371 ZNF333Q96JL9 665 aa28.54■■■□□ 2.16
LTBP3-213ENST00000529371 IWS1Q96ST2 819 aa28.54■■■□□ 2.16
LTBP3-213ENST00000529371 HMX1Q9NP08 348 aaPredicted RBP28.54■■■□□ 2.16
LTBP3-213ENST00000529371 NRBP1Q9UHY1 535 aa28.54■■■□□ 2.16
LTBP3-213ENST00000529371 FOSP01100 380 aaPredicted RBP28.53■■■□□ 2.16
LTBP3-213ENST00000529371 AP3B2Q13367 1082 aa28.53■■■□□ 2.16
LTBP3-213ENST00000529371 ZHX1Q9UKY1 873 aaPredicted RBP28.53■■■□□ 2.16
LTBP3-213ENST00000529371 SMC3Q9UQE7 1217 aa28.53■■■□□ 2.16
LTBP3-213ENST00000529371 RPTORQ8N122 1335 aa28.52■■■□□ 2.16
LTBP3-213ENST00000529371 CNGA1P29973 690 aa28.52■■■□□ 2.16
LTBP3-213ENST00000529371 FOSBP53539 338 aa28.52■■■□□ 2.16
LTBP3-213ENST00000529371 MAP3K21Q5TCX8 1036 aa28.52■■■□□ 2.16
LTBP3-213ENST00000529371 ABHD16BQ9H3Z7 469 aa28.52■■■□□ 2.16
LTBP3-213ENST00000529371 BRMS1Q9HCU9 246 aa28.52■■■□□ 2.16
LTBP3-213ENST00000529371 PCDHA4Q9UN74 947 aa28.52■■■□□ 2.16
LTBP3-213ENST00000529371 SNAI1O95863 264 aaPredicted RBP28.51■■■□□ 2.15
LTBP3-213ENST00000529371 IGHA2P01877 340 aa28.51■■■□□ 2.15
LTBP3-213ENST00000529371 MORC4Q8TE76 937 aa28.51■■■□□ 2.15
LTBP3-213ENST00000529371 PDCD2LQ9BRP1 358 aa28.51■■■□□ 2.15
LTBP3-213ENST00000529371 PCDHA6Q9UN73 950 aa28.51■■■□□ 2.15
LTBP3-213ENST00000529371 PCDHA8Q9Y5H6 950 aa28.51■■■□□ 2.15
LTBP3-213ENST00000529371 NR3C2P08235 984 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 MYCLP12524 364 aaPredicted RBP28.5■■■□□ 2.15
LTBP3-213ENST00000529371 CYBAP13498 195 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 CCL5P13501 91 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 EDNRBP24530 442 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 CCND2P30279 289 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 CUL4AQ13619 759 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 PGM5Q15124 567 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 STXBP2Q15833 593 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 PRAMEF19Q5SWL8 479 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 JAKMIP3Q5VZ66 844 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 BLIDQ8IZY5 108 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 ABHD8Q96I13 439 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 C8orf76Q96K31 380 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 ANO3Q9BYT9 981 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 VTA1Q9NP79 307 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 KCNJ14Q9UNX9 436 aa28.5■■■□□ 2.15
LTBP3-213ENST00000529371 ACVR2BQ13705 512 aa28.49■■■□□ 2.15
LTBP3-213ENST00000529371 EEPD1Q7L9B9 569 aa28.49■■■□□ 2.15
LTBP3-213ENST00000529371 DAGLBQ8NCG7 672 aa28.49■■■□□ 2.15
LTBP3-213ENST00000529371 SHISA4Q96DD7 197 aa28.49■■■□□ 2.15
LTBP3-213ENST00000529371 PHF20Q9BVI0 1012 aa28.49■■■□□ 2.15
LTBP3-213ENST00000529371 TMEM106CQ9BVX2 250 aa28.49■■■□□ 2.15
LTBP3-213ENST00000529371 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.49■■■□□ 2.15
LTBP3-213ENST00000529371 RNF208Q9H0X6 261 aa28.49■■■□□ 2.15
LTBP3-213ENST00000529371 UNC93B1Q9H1C4 597 aa28.49■■■□□ 2.15
LTBP3-213ENST00000529371 TMEM260Q9NX78 707 aa28.49■■■□□ 2.15
LTBP3-213ENST00000529371 MCM3APO60318 1980 aa28.49■■■□□ 2.15
LTBP3-213ENST00000529371 FRMPD4Q14CM0 1322 aa28.48■■■□□ 2.15
LTBP3-213ENST00000529371 HSP90AA1P07900 732 aaKnown RBP28.48■■■□□ 2.15
LTBP3-213ENST00000529371 CCND3P30281 292 aaPredicted RBP28.48■■■□□ 2.15
LTBP3-213ENST00000529371 CLK2P49760 499 aaKnown RBP28.48■■■□□ 2.15
LTBP3-213ENST00000529371 MTFR1Q15390 333 aa28.48■■■□□ 2.15
LTBP3-213ENST00000529371 FBXO16Q8IX29 292 aaPredicted RBP28.48■■■□□ 2.15
LTBP3-213ENST00000529371 DDX49Q9Y6V7 483 aaKnown RBP28.48■■■□□ 2.15
LTBP3-213ENST00000529371 GJB2P29033 226 aa28.47■■■□□ 2.15
LTBP3-213ENST00000529371 SAFBQ15424 915 aaKnown RBP eCLIP28.47■■■□□ 2.15
LTBP3-213ENST00000529371 PGBD1Q96JS3 809 aa28.47■■■□□ 2.15
LTBP3-213ENST00000529371 GJB4Q9NTQ9 266 aa28.47■■■□□ 2.15
LTBP3-213ENST00000529371 AKR1A1P14550 325 aa28.46■■■□□ 2.15
LTBP3-213ENST00000529371 KRT2P35908 639 aa28.46■■■□□ 2.15
LTBP3-213ENST00000529371 KRT40Q6A162 431 aa28.46■■■□□ 2.15
LTBP3-213ENST00000529371 XRRA1Q6P2D8 792 aa28.46■■■□□ 2.15
LTBP3-213ENST00000529371 TRPV1Q8NER1 839 aa28.46■■■□□ 2.15
LTBP3-213ENST00000529371 RASGRP4Q8TDF6 673 aa28.46■■■□□ 2.15
LTBP3-213ENST00000529371 FAM184BQ9ULE4 1060 aa28.46■■■□□ 2.15
LTBP3-213ENST00000529371 LRRC37A2A6NM11 1700 aa28.46■■■□□ 2.15
LTBP3-213ENST00000529371 SEPT4O43236 478 aa28.45■■■□□ 2.14
LTBP3-213ENST00000529371 MSCO60682 206 aa28.45■■■□□ 2.14
LTBP3-213ENST00000529371 EIF3JO75822 258 aaKnown RBP28.45■■■□□ 2.14
LTBP3-213ENST00000529371 ZNF865P0CJ78 1059 aaPredicted RBP28.45■■■□□ 2.14
LTBP3-213ENST00000529371 PCNX4Q63HM2 1172 aa28.45■■■□□ 2.14
LTBP3-213ENST00000529371 IL31RAQ8NI17 732 aa28.45■■■□□ 2.14
LTBP3-213ENST00000529371 INTS4Q96HW7 963 aaKnown RBP28.45■■■□□ 2.14
LTBP3-213ENST00000529371 STAM2O75886 525 aa28.44■■■□□ 2.14
LTBP3-213ENST00000529371 MMP1P03956 469 aa28.44■■■□□ 2.14
LTBP3-213ENST00000529371 VSIG10LQ86VR7 867 aa28.44■■■□□ 2.14
LTBP3-213ENST00000529371 CCDC194A0A1B0GVG4 234 aa28.43■■■□□ 2.14
LTBP3-213ENST00000529371 SREBF1P36956 1147 aa28.43■■■□□ 2.14
LTBP3-213ENST00000529371 GUCY1B3Q02153 619 aa28.43■■■□□ 2.14
LTBP3-213ENST00000529371 BECN1Q14457 450 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms