RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 MRFAP1L1Q96HT8 127 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 CDC6Q99741 560 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 DBR1Q9UK59 544 aaKnown RBP7.18□□□□□ -1.26
SSR3-209ENST00000498205 KDM2BQ8NHM5 1336 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 PRODHO43272 600 aa7.17□□□□□ -1.26
SSR3-209ENST00000498205 APPP05067 770 aa7.17□□□□□ -1.26
SSR3-209ENST00000498205 SUMO1P63165 101 aaKnown RBP7.17□□□□□ -1.26
SSR3-209ENST00000498205 SRSF3P84103 164 aaKnown RBP7.17□□□□□ -1.26
SSR3-209ENST00000498205 LSAMPQ13449 338 aa7.17□□□□□ -1.26
SSR3-209ENST00000498205 KIR3DS1Q14943 382 aa7.17□□□□□ -1.26
SSR3-209ENST00000498205 SF1Q15637 639 aaKnown RBP7.17□□□□□ -1.26
SSR3-209ENST00000498205 PRSS53Q2L4Q9 553 aa7.17□□□□□ -1.26
SSR3-209ENST00000498205 WWC2Q6AWC2 1192 aa7.17□□□□□ -1.26
SSR3-209ENST00000498205 RPTNQ6XPR3 784 aa7.17□□□□□ -1.26
SSR3-209ENST00000498205 MTA3Q9BTC8 594 aa7.17□□□□□ -1.26
SSR3-209ENST00000498205 MCOLN1Q9GZU1 580 aa7.17□□□□□ -1.26
SSR3-209ENST00000498205 KLHL14Q9P2G3 628 aa7.17□□□□□ -1.26
SSR3-209ENST00000498205 GULP1Q9UBP9 304 aa7.17□□□□□ -1.26
SSR3-209ENST00000498205 CDK11AQ9UQ88 783 aaPredicted RBP7.17□□□□□ -1.26
SSR3-209ENST00000498205 RWDD3Q9Y3V2 267 aa7.17□□□□□ -1.26
SSR3-209ENST00000498205 NUDT19A8MXV4 375 aa7.16□□□□□ -1.26
SSR3-209ENST00000498205 ADCY3O60266 1144 aa7.16□□□□□ -1.26
SSR3-209ENST00000498205 YBX3P16989 372 aaKnown RBP eCLIP7.16□□□□□ -1.26
SSR3-209ENST00000498205 CHRNA2Q15822 529 aa7.16□□□□□ -1.26
SSR3-209ENST00000498205 INF2Q27J81 1249 aa7.16□□□□□ -1.26
SSR3-209ENST00000498205 MAMDC2Q7Z304 686 aaPredicted RBP7.16□□□□□ -1.26
SSR3-209ENST00000498205 CCDC103Q8IW40 242 aa7.16□□□□□ -1.26
SSR3-209ENST00000498205 JMYQ8N9B5 988 aa7.16□□□□□ -1.26
SSR3-209ENST00000498205 THAP3Q8WTV1 239 aaPredicted RBP7.16□□□□□ -1.26
SSR3-209ENST00000498205 TMEM169Q96HH4 297 aa7.16□□□□□ -1.26
SSR3-209ENST00000498205 AP5M1Q9H0R1 490 aa7.16□□□□□ -1.26
SSR3-209ENST00000498205 MARCH2Q9P0N8 246 aa7.16□□□□□ -1.26
SSR3-209ENST00000498205 PFDN2Q9UHV9 154 aa7.16□□□□□ -1.26
SSR3-209ENST00000498205 COA3Q9Y2R0 106 aaPredicted RBP7.16□□□□□ -1.26
SSR3-209ENST00000498205 X6R8D5 127 aa7.16□□□□□ -1.26
SSR3-209ENST00000498205 TRBV23-1A0A0A0MS06 115 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 FUCA1P04066 466 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 TACR1P25103 407 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 VIPR1P32241 457 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 RAP1GAPP47736 663 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 SLC6A11P48066 632 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 PLEKHN1Q494U1 663 aaPredicted RBP7.15□□□□□ -1.26
SSR3-209ENST00000498205 ZNF648Q5T619 568 aaPredicted RBP7.15□□□□□ -1.26
SSR3-209ENST00000498205 MBLAC2Q68D91 279 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 STYK1Q6J9G0 422 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 USP53Q70EK8 1073 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 RCBTB1Q8NDN9 531 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 ZSWIM2Q8NEG5 633 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 PLEKHO2Q8TD55 490 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 OSBP2Q969R2 916 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 TRMT2BQ96GJ1 504 aaKnown RBP7.15□□□□□ -1.26
SSR3-209ENST00000498205 DNAJC7Q99615 494 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 KRTAP4-8Q9BYQ9 185 aa7.15□□□□□ -1.26
SSR3-209ENST00000498205 ABCC9O60706 1549 aa7.15□□□□□ -1.27
SSR3-209ENST00000498205 MYOCOSA0A1B0GUC4 107 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 FAM221BA6H8Z2 402 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 TCAF2A6NFQ2 919 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 C22orf46C9J442 243 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 F8W031 263 aaPredicted RBP7.14□□□□□ -1.27
SSR3-209ENST00000498205 AQP7O14520 342 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 C8AP07357 584 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 TARBP2Q15633 366 aaKnown RBP7.14□□□□□ -1.27
SSR3-209ENST00000498205 CEP68Q76N32 757 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 TMC6Q7Z403 805 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 IFNL3Q8IZI9 196 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 SEC14L1Q92503 715 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 PTPRN2Q92932 1015 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 TSPAN17Q96FV3 270 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 CHAMP1Q96JM3 812 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 DHRS4Q9BTZ2 278 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 LNPKQ9C0E8 428 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 RNF38Q9H0F5 515 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 ZSWIM4Q9H7M6 989 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 TMEFF2Q9UIK5 374 aaPredicted RBP7.14□□□□□ -1.27
SSR3-209ENST00000498205 MBD1Q9UIS9 605 aaPredicted RBP7.14□□□□□ -1.27
SSR3-209ENST00000498205 PCDHA2Q9Y5H9 948 aa7.14□□□□□ -1.27
SSR3-209ENST00000498205 MAFKO60675 156 aa7.13□□□□□ -1.27
SSR3-209ENST00000498205 PPP1R11O60927 126 aaPredicted RBP7.13□□□□□ -1.27
SSR3-209ENST00000498205 PFKLP17858 780 aa7.13□□□□□ -1.27
SSR3-209ENST00000498205 BCL6P41182 706 aa7.13□□□□□ -1.27
SSR3-209ENST00000498205 GABREP78334 506 aa7.13□□□□□ -1.27
SSR3-209ENST00000498205 DLG4P78352 724 aa7.13□□□□□ -1.27
SSR3-209ENST00000498205 KIZQ2M2Z5 673 aa7.13□□□□□ -1.27
SSR3-209ENST00000498205 C2orf27AQ580R0 203 aa7.13□□□□□ -1.27
SSR3-209ENST00000498205 DENND5AQ6IQ26 1287 aa7.13□□□□□ -1.27
SSR3-209ENST00000498205 ANKLE2Q86XL3 938 aa7.13□□□□□ -1.27
SSR3-209ENST00000498205 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.13□□□□□ -1.27
SSR3-209ENST00000498205 DPF3Q92784 378 aa7.13□□□□□ -1.27
SSR3-209ENST00000498205 GOLGA2P5Q9HBQ8 144 aa7.13□□□□□ -1.27
SSR3-209ENST00000498205 ETV2O00321 342 aaPredicted RBP7.12□□□□□ -1.27
SSR3-209ENST00000498205 N4BP3O15049 544 aa7.12□□□□□ -1.27
SSR3-209ENST00000498205 DIAPH1O60610 1272 aaKnown RBP7.12□□□□□ -1.27
SSR3-209ENST00000498205 EFCAB14O75071 495 aa7.12□□□□□ -1.27
SSR3-209ENST00000498205 NTRK1P04629 796 aa7.12□□□□□ -1.27
SSR3-209ENST00000498205 SDHBP21912 280 aa7.12□□□□□ -1.27
SSR3-209ENST00000498205 GPR85P60893 370 aa7.12□□□□□ -1.27
SSR3-209ENST00000498205 BMS1Q14692 1282 aaKnown RBP7.12□□□□□ -1.27
SSR3-209ENST00000498205 CCDC144BQ3MJ40 725 aa7.12□□□□□ -1.27
SSR3-209ENST00000498205 PHF20Q9BVI0 1012 aa7.12□□□□□ -1.27
SSR3-209ENST00000498205 EPB41L1Q9H4G0 881 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms