RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 ATL3Q6DD88 541 aa10.84□□□□□ -0.67
ACTN4-207ENST00000495553 NSMFQ6X4W1 530 aa10.84□□□□□ -0.67
ACTN4-207ENST00000495553 NOSTRINQ8IVI9 506 aa10.84□□□□□ -0.67
ACTN4-207ENST00000495553 NPLOC4Q8TAT6 608 aa10.84□□□□□ -0.67
ACTN4-207ENST00000495553 FOXD4L4Q8WXT5 416 aaPredicted RBP10.84□□□□□ -0.67
ACTN4-207ENST00000495553 TRIB2Q92519 343 aa10.84□□□□□ -0.67
ACTN4-207ENST00000495553 ZNF396Q96N95 335 aaPredicted RBP10.84□□□□□ -0.67
ACTN4-207ENST00000495553 GBP4Q96PP9 640 aa10.84□□□□□ -0.67
ACTN4-207ENST00000495553 MPHOSPH6Q99547 160 aaKnown RBP10.84□□□□□ -0.67
ACTN4-207ENST00000495553 NAP1L4Q99733 375 aaKnown RBP10.84□□□□□ -0.67
ACTN4-207ENST00000495553 PFASO15067 1338 aa10.84□□□□□ -0.67
ACTN4-207ENST00000495553 B4DLN1 442 aa10.83□□□□□ -0.68
ACTN4-207ENST00000495553 GOLGA6L22H0YM25 854 aa10.83□□□□□ -0.68
ACTN4-207ENST00000495553 PPP1R11O60927 126 aaPredicted RBP10.83□□□□□ -0.68
ACTN4-207ENST00000495553 CFBP00751 764 aa10.83□□□□□ -0.68
ACTN4-207ENST00000495553 PRKAR2AP13861 404 aaKnown RBP10.83□□□□□ -0.68
ACTN4-207ENST00000495553 U2AF2P26368 475 aaKnown RBP eCLIP10.83□□□□□ -0.68
ACTN4-207ENST00000495553 AP3B2Q13367 1082 aa10.83□□□□□ -0.68
ACTN4-207ENST00000495553 ZNF792Q3KQV3 632 aa10.83□□□□□ -0.68
ACTN4-207ENST00000495553 OLFML2BQ68BL8 750 aa10.83□□□□□ -0.68
ACTN4-207ENST00000495553 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.83□□□□□ -0.688e-8■□□□□ 11.2
ACTN4-207ENST00000495553 FERMT3Q86UX7 667 aa10.83□□□□□ -0.68
ACTN4-207ENST00000495553 MAML3Q96JK9 1138 aa10.83□□□□□ -0.68
ACTN4-207ENST00000495553 RNF208Q9H0X6 261 aa10.83□□□□□ -0.68
ACTN4-207ENST00000495553 A1CFQ9NQ94 594 aaKnown RBP10.83□□□□□ -0.68
ACTN4-207ENST00000495553 CFAP45Q9UL16 551 aa10.83□□□□□ -0.68
ACTN4-207ENST00000495553 DIS3Q9Y2L1 958 aaKnown RBP10.83□□□□□ -0.68
ACTN4-207ENST00000495553 DNAJC25-GNG10A0A024R161 153 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 BTBD18B2RXH4 712 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 PIK3CDO00329 1044 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 NFIBO00712 420 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 CCL5P13501 91 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 NCLP19338 710 aaKnown RBP10.82□□□□□ -0.68
ACTN4-207ENST00000495553 CYP2C19P33261 490 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 TRAPPC10P48553 1259 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 BAATQ14032 418 aaPredicted RBP10.82□□□□□ -0.68
ACTN4-207ENST00000495553 NONOQ15233 471 aaKnown RBP eCLIP10.82□□□□□ -0.684e-7■■□□□ 12.5
ACTN4-207ENST00000495553 MTFR1Q15390 333 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 RILPL1Q5EBL4 403 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 RNF207Q6ZRF8 634 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 CLEC4DQ8WXI8 215 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 HMX1Q9NP08 348 aaPredicted RBP10.82□□□□□ -0.68
ACTN4-207ENST00000495553 GJB4Q9NTQ9 266 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 CYP39A1Q9NYL5 469 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 FLRT1Q9NZU1 646 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 CEP131Q9UPN4 1083 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 RPTORQ8N122 1335 aa10.82□□□□□ -0.68
ACTN4-207ENST00000495553 A0A0G2JMZ2 1700 aa10.81□□□□□ -0.68
ACTN4-207ENST00000495553 BMP15O95972 392 aa10.81□□□□□ -0.68
ACTN4-207ENST00000495553 SOX10P56693 466 aa10.81□□□□□ -0.68
ACTN4-207ENST00000495553 KRT85P78386 507 aa10.81□□□□□ -0.68
ACTN4-207ENST00000495553 CACNB2Q08289 660 aaPredicted RBP10.81□□□□□ -0.68
ACTN4-207ENST00000495553 TRIM32Q13049 653 aa10.81□□□□□ -0.68
ACTN4-207ENST00000495553 PKP1Q13835 747 aa10.81□□□□□ -0.68
ACTN4-207ENST00000495553 PIK3AP1Q6ZUJ8 805 aa10.81□□□□□ -0.68
ACTN4-207ENST00000495553 ZNF467Q7Z7K2 595 aaPredicted RBP10.81□□□□□ -0.68
ACTN4-207ENST00000495553 MSL3Q8N5Y2 521 aaKnown RBP10.81□□□□□ -0.68
ACTN4-207ENST00000495553 TINF2Q9BSI4 451 aa10.81□□□□□ -0.68
ACTN4-207ENST00000495553 UNC93B1Q9H1C4 597 aa10.81□□□□□ -0.68
ACTN4-207ENST00000495553 PCDHA6Q9UN73 950 aa10.81□□□□□ -0.68
ACTN4-207ENST00000495553 PCDHA8Q9Y5H6 950 aa10.81□□□□□ -0.68
ACTN4-207ENST00000495553 RLFQ13129 1914 aa10.81□□□□□ -0.68
ACTN4-207ENST00000495553 BRCA2P51587 3418 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 ZSWIM8A7E2V4 1837 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 PARP14Q460N5 1801 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 ASB14A6NK59 587 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 CNGA1P29973 690 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 HSD17B4P51659 736 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 RPS6P62753 249 aaKnown RBP10.8□□□□□ -0.68
ACTN4-207ENST00000495553 CNTN2Q02246 1040 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 RESTQ13127 1097 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 NR5A1Q13285 461 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 MAP3K21Q5TCX8 1036 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 JAKMIP3Q5VZ66 844 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 TYW1BQ6NUM6 668 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 FCHSD1Q86WN1 690 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 FAM133AQ8N9E0 248 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 SCAND2PQ9GZW5 306 aaPredicted RBP10.8□□□□□ -0.68
ACTN4-207ENST00000495553 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.8□□□□□ -0.684e-8■■■■□ 22.9
ACTN4-207ENST00000495553 ADD3Q9UEY8 706 aaKnown RBP10.8□□□□□ -0.68
ACTN4-207ENST00000495553 CNPY2Q9Y2B0 182 aa10.8□□□□□ -0.68
ACTN4-207ENST00000495553 MEIS2O14770 477 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 GJB1P08034 283 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 GCFC2P16383 781 aaKnown RBP10.79□□□□□ -0.68
ACTN4-207ENST00000495553 PTMSP20962 102 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 HOXA13P31271 388 aaPredicted RBP10.79□□□□□ -0.68
ACTN4-207ENST00000495553 ZNF76P36508 570 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 ORC2Q13416 577 aaPredicted RBP10.79□□□□□ -0.68
ACTN4-207ENST00000495553 UBE2SQ16763 222 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 ARHGEF16Q5VV41 709 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 MYSM1Q5VVJ2 828 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 USP17L6PQ6QN14 398 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 MAMDC4Q6UXC1 1216 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 SLC30A10Q6XR72 485 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 NEK8Q86SG6 692 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 OXER1Q8TDS5 423 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 TNPO1Q92973 898 aaKnown RBP10.79□□□□□ -0.68
ACTN4-207ENST00000495553 DEFB118Q96PH6 123 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 ANO3Q9BYT9 981 aa10.79□□□□□ -0.68
ACTN4-207ENST00000495553 NRBP1Q9UHY1 535 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 271.4 ms