RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 FTOQ9C0B1 505 aaKnown RBP eCLIP16.13■□□□□ 0.17
SAMM50-204ENST00000493161 TCP11L1Q9NUJ3 509 aa16.13■□□□□ 0.17
SAMM50-204ENST00000493161 LOC102724159A0A0B4J2E5 919 aa16.12■□□□□ 0.17
SAMM50-204ENST00000493161 GOLGA8HP0CJ92 632 aa16.12■□□□□ 0.17
SAMM50-204ENST00000493161 TXNP10599 105 aaKnown RBP16.12■□□□□ 0.17
SAMM50-204ENST00000493161 POU3F3P20264 500 aaPredicted RBP16.12■□□□□ 0.17
SAMM50-204ENST00000493161 ZNF543Q08ER8 600 aa16.12■□□□□ 0.17
SAMM50-204ENST00000493161 GPNMBQ14956 572 aa16.12■□□□□ 0.17
SAMM50-204ENST00000493161 PWP2Q15269 919 aaKnown RBP16.12■□□□□ 0.17
SAMM50-204ENST00000493161 NFRKBQ6P4R8 1299 aa16.12■□□□□ 0.17
SAMM50-204ENST00000493161 TMCO2Q7Z6W1 182 aaPredicted RBP16.12■□□□□ 0.17
SAMM50-204ENST00000493161 ZNF589Q86UQ0 364 aaPredicted RBP16.12■□□□□ 0.17
SAMM50-204ENST00000493161 HERC6Q8IVU3 1022 aa16.12■□□□□ 0.17
SAMM50-204ENST00000493161 SCFD2Q8WU76 684 aa16.12■□□□□ 0.17
SAMM50-204ENST00000493161 ARNTL2Q8WYA1 636 aa16.12■□□□□ 0.17
SAMM50-204ENST00000493161 TBC1D5Q92609 795 aa16.12■□□□□ 0.17
SAMM50-204ENST00000493161 SLC9A7Q96T83 725 aa16.12■□□□□ 0.17
SAMM50-204ENST00000493161 HELLSQ9NRZ9 838 aa16.12■□□□□ 0.17
SAMM50-204ENST00000493161 PRRC2BQ5JSZ5 2229 aaKnown RBP16.11■□□□□ 0.17
SAMM50-204ENST00000493161 PITPNM1O00562 1244 aa16.11■□□□□ 0.17
SAMM50-204ENST00000493161 NKRFO15226 690 aaKnown RBP eCLIP16.11■□□□□ 0.17
SAMM50-204ENST00000493161 ACTN1P12814 892 aa16.11■□□□□ 0.17
SAMM50-204ENST00000493161 RFC2P35250 354 aa16.11■□□□□ 0.17
SAMM50-204ENST00000493161 USH1GQ495M9 461 aa16.11■□□□□ 0.17
SAMM50-204ENST00000493161 RETREG2Q8NC44 543 aa16.11■□□□□ 0.17
SAMM50-204ENST00000493161 EVI5LQ96CN4 794 aa16.11■□□□□ 0.17
SAMM50-204ENST00000493161 TANC1Q9C0D5 1861 aa16.11■□□□□ 0.17
SAMM50-204ENST00000493161 PTPRSQ13332 1948 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 LCHNA4D1U4 455 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 LPXNO60711 386 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 SNHG28P0DPA3 235 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 HSPD1P10809 573 aaKnown RBP16.1■□□□□ 0.17
SAMM50-204ENST00000493161 TCTN1Q2MV58 587 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 BRDTQ58F21 947 aaPredicted RBP16.1■□□□□ 0.17
SAMM50-204ENST00000493161 ANKRD45Q5TZF3 282 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 CCDC62Q6P9F0 684 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 TBC1D10CQ8IV04 446 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 DNERQ8NFT8 737 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 PHOSPHO2Q8TCD6 241 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 AFG1LQ8WV93 481 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 ZKSCAN3Q9BRR0 538 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 UBA5Q9GZZ9 404 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 WDR19Q8NEZ3 1342 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 RAD50Q92878 1312 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 TET1Q8NFU7 2136 aa16.1■□□□□ 0.17
SAMM50-204ENST00000493161 GTPBP6O43824 516 aaPredicted RBP16.09■□□□□ 0.17
SAMM50-204ENST00000493161 KPNA6O60684 536 aa16.09■□□□□ 0.17
SAMM50-204ENST00000493161 PDE1AP54750 535 aa16.09■□□□□ 0.17
SAMM50-204ENST00000493161 PTPN11Q06124 597 aaPredicted RBP16.09■□□□□ 0.17
SAMM50-204ENST00000493161 NMIQ13287 307 aaPredicted RBP16.09■□□□□ 0.17
SAMM50-204ENST00000493161 GRB10Q13322 594 aa16.09■□□□□ 0.17
SAMM50-204ENST00000493161 BFSP2Q13515 415 aa16.09■□□□□ 0.17
SAMM50-204ENST00000493161 PTGISQ16647 500 aa16.09■□□□□ 0.17
SAMM50-204ENST00000493161 LY6KQ17RY6 165 aa16.09■□□□□ 0.17
SAMM50-204ENST00000493161 MCMDC2Q4G0Z9 681 aa16.09■□□□□ 0.17
SAMM50-204ENST00000493161 GDF6Q6KF10 455 aaPredicted RBP16.09■□□□□ 0.17
SAMM50-204ENST00000493161 DHX38Q92620 1227 aaKnown RBP16.09■□□□□ 0.17
SAMM50-204ENST00000493161 KAT2BQ92831 832 aa16.09■□□□□ 0.17
SAMM50-204ENST00000493161 TAAR1Q96RJ0 339 aa16.09■□□□□ 0.17
SAMM50-204ENST00000493161 EPHX3Q9H6B9 360 aa16.09■□□□□ 0.17
SAMM50-204ENST00000493161 COL20A1Q9P218 1284 aa16.09■□□□□ 0.17
SAMM50-204ENST00000493161 NOD1Q9Y239 953 aa16.09■□□□□ 0.17
SAMM50-204ENST00000493161 TLL1O43897 1013 aa16.08■□□□□ 0.16
SAMM50-204ENST00000493161 AAK1Q2M2I8 961 aa16.08■□□□□ 0.16
SAMM50-204ENST00000493161 SEPT14Q6ZU15 432 aa16.08■□□□□ 0.16
SAMM50-204ENST00000493161 CHST3Q7LGC8 479 aa16.08■□□□□ 0.16
SAMM50-204ENST00000493161 NEDD4P46934 1319 aa16.08■□□□□ 0.16
SAMM50-204ENST00000493161 COL4A4P53420 1690 aaPredicted RBP16.08■□□□□ 0.16
SAMM50-204ENST00000493161 MMP3P08254 477 aa16.07■□□□□ 0.16
SAMM50-204ENST00000493161 PLA2G5P39877 138 aa16.07■□□□□ 0.16
SAMM50-204ENST00000493161 WDR5P61964 334 aaKnown RBP16.07■□□□□ 0.16
SAMM50-204ENST00000493161 DEFB103AP81534 67 aa16.07■□□□□ 0.16
SAMM50-204ENST00000493161 ARHGAP1Q07960 439 aa16.07■□□□□ 0.16
SAMM50-204ENST00000493161 MFSD6Q6ZSS7 791 aa16.07■□□□□ 0.16
SAMM50-204ENST00000493161 KHSRPQ92945 711 aaKnown RBP eCLIP16.07■□□□□ 0.16
SAMM50-204ENST00000493161 TTC14Q96N46 770 aa16.07■□□□□ 0.16
SAMM50-204ENST00000493161 MPHOSPH6Q99547 160 aaKnown RBP16.07■□□□□ 0.16
SAMM50-204ENST00000493161 NCOR1O75376 2440 aa16.07■□□□□ 0.16
SAMM50-204ENST00000493161 TRIP12Q14669 1992 aaPredicted RBP16.06■□□□□ 0.16
SAMM50-204ENST00000493161 ZMYM6O95789 1325 aa16.06■□□□□ 0.16
SAMM50-204ENST00000493161 KIF28PB7ZC32 967 aa16.06■□□□□ 0.16
SAMM50-204ENST00000493161 NBNO60934 754 aa16.06■□□□□ 0.16
SAMM50-204ENST00000493161 BAIAP3O94812 1187 aa16.06■□□□□ 0.16
SAMM50-204ENST00000493161 CDC37Q16543 378 aaPredicted RBP16.06■□□□□ 0.16
SAMM50-204ENST00000493161 RGS22Q8NE09 1264 aa16.06■□□□□ 0.16
SAMM50-204ENST00000493161 SYTL5Q8TDW5 730 aaPredicted RBP16.06■□□□□ 0.16
SAMM50-204ENST00000493161 GDPD5Q8WTR4 605 aa16.06■□□□□ 0.16
SAMM50-204ENST00000493161 C1QTNF1Q9BXJ1 281 aa16.06■□□□□ 0.16
SAMM50-204ENST00000493161 PNMA2Q9UL42 364 aa16.06■□□□□ 0.16
SAMM50-204ENST00000493161 COG5Q9UP83 839 aa16.06■□□□□ 0.16
SAMM50-204ENST00000493161 CCDC171Q6TFL3 1326 aa16.05■□□□□ 0.16
SAMM50-204ENST00000493161 GH1P01241 217 aa16.05■□□□□ 0.16
SAMM50-204ENST00000493161 SELPP16109 830 aa16.05■□□□□ 0.16
SAMM50-204ENST00000493161 KCNJ6P48051 423 aa16.05■□□□□ 0.16
SAMM50-204ENST00000493161 LRRC8DQ7L1W4 858 aa16.05■□□□□ 0.16
SAMM50-204ENST00000493161 SESTD1Q86VW0 696 aa16.05■□□□□ 0.16
SAMM50-204ENST00000493161 AFAP1L1Q8TED9 768 aa16.05■□□□□ 0.16
SAMM50-204ENST00000493161 WNT8BQ93098 351 aa16.05■□□□□ 0.16
SAMM50-204ENST00000493161 HLA-CQ95604 372 aa16.05■□□□□ 0.16
SAMM50-204ENST00000493161 HDAC6Q9UBN7 1215 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms