RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 NFRKBQ6P4R8 1299 aa14.72□□□□□ -0.05
TREX1-204ENST00000492235 HERC6Q8IVU3 1022 aa14.72□□□□□ -0.05
TREX1-204ENST00000492235 PHOSPHO2Q8TCD6 241 aa14.72□□□□□ -0.05
TREX1-204ENST00000492235 TMEM47Q9BQJ4 181 aa14.72□□□□□ -0.05
TREX1-204ENST00000492235 C1QTNF1Q9BXJ1 281 aa14.72□□□□□ -0.05
TREX1-204ENST00000492235 NOD1Q9Y239 953 aa14.72□□□□□ -0.05
TREX1-204ENST00000492235 PTPRSQ13332 1948 aa14.72□□□□□ -0.05
TREX1-204ENST00000492235 A6NJR5 290 aa14.71□□□□□ -0.05
TREX1-204ENST00000492235 PITPNM1O00562 1244 aa14.71□□□□□ -0.05
TREX1-204ENST00000492235 NKRFO15226 690 aaKnown RBP eCLIP14.71□□□□□ -0.05
TREX1-204ENST00000492235 RPS6P62753 249 aaKnown RBP14.71□□□□□ -0.05
TREX1-204ENST00000492235 SCFD2Q8WU76 684 aa14.71□□□□□ -0.05
TREX1-204ENST00000492235 MPHOSPH6Q99547 160 aaKnown RBP14.71□□□□□ -0.05
TREX1-204ENST00000492235 COL4A4P53420 1690 aaPredicted RBP14.71□□□□□ -0.06
TREX1-204ENST00000492235 TRIP12Q14669 1992 aaPredicted RBP14.71□□□□□ -0.06
TREX1-204ENST00000492235 TET1Q8NFU7 2136 aa14.71□□□□□ -0.06
TREX1-204ENST00000492235 KIF28PB7ZC32 967 aa14.7□□□□□ -0.06
TREX1-204ENST00000492235 KPNA6O60684 536 aa14.7□□□□□ -0.06
TREX1-204ENST00000492235 FGRP09769 529 aa14.7□□□□□ -0.06
TREX1-204ENST00000492235 TXNP10599 105 aaKnown RBP14.7□□□□□ -0.06
TREX1-204ENST00000492235 PDHBP11177 359 aa14.7□□□□□ -0.06
TREX1-204ENST00000492235 EDNRBP24530 442 aa14.7□□□□□ -0.06
TREX1-204ENST00000492235 PTPN11Q06124 597 aaPredicted RBP14.7□□□□□ -0.06
TREX1-204ENST00000492235 BFSP2Q13515 415 aa14.7□□□□□ -0.06
TREX1-204ENST00000492235 SPRED2Q7Z698 418 aa14.7□□□□□ -0.06
TREX1-204ENST00000492235 COG5Q9UP83 839 aa14.7□□□□□ -0.06
TREX1-204ENST00000492235 TLL1O43897 1013 aa14.69□□□□□ -0.06
TREX1-204ENST00000492235 ARIH2O95376 493 aa14.69□□□□□ -0.06
TREX1-204ENST00000492235 KCNJ6P48051 423 aa14.69□□□□□ -0.06
TREX1-204ENST00000492235 GRB10Q13322 594 aa14.69□□□□□ -0.06
TREX1-204ENST00000492235 PTGISQ16647 500 aa14.69□□□□□ -0.06
TREX1-204ENST00000492235 DNERQ8NFT8 737 aa14.69□□□□□ -0.06
TREX1-204ENST00000492235 EPHX3Q9H6B9 360 aa14.69□□□□□ -0.06
TREX1-204ENST00000492235 PCDHB15Q9Y5E8 787 aa14.69□□□□□ -0.06
TREX1-204ENST00000492235 BAIAP3O94812 1187 aa14.68□□□□□ -0.06
TREX1-204ENST00000492235 FGAP02671 866 aa14.68□□□□□ -0.06
TREX1-204ENST00000492235 ZNF543Q08ER8 600 aa14.68□□□□□ -0.06
TREX1-204ENST00000492235 ALX1Q15699 326 aa14.68□□□□□ -0.06
TREX1-204ENST00000492235 USH1GQ495M9 461 aa14.68□□□□□ -0.06
TREX1-204ENST00000492235 TMCO2Q7Z6W1 182 aaPredicted RBP14.68□□□□□ -0.06
TREX1-204ENST00000492235 HLA-CQ95604 372 aa14.68□□□□□ -0.06
TREX1-204ENST00000492235 TCP11L1Q9NUJ3 509 aa14.68□□□□□ -0.06
TREX1-204ENST00000492235 PNMA2Q9UL42 364 aa14.68□□□□□ -0.06
TREX1-204ENST00000492235 WDR19Q8NEZ3 1342 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 SALL3Q9BXA9 1300 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 LCHNA4D1U4 455 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 B4DLN1 442 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 LPXNO60711 386 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 MRPL12P52815 198 aaKnown RBP14.67□□□□□ -0.06
TREX1-204ENST00000492235 HAND2P61296 217 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 GDF6Q6KF10 455 aaPredicted RBP14.67□□□□□ -0.06
TREX1-204ENST00000492235 SEPT14Q6ZU15 432 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 CHST3Q7LGC8 479 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 CCDC155Q8N6L0 562 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 AFAP1L1Q8TED9 768 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 AFG1LQ8WV93 481 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 EVI5LQ96CN4 794 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 FAM227BQ96M60 508 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 LRFN3Q9BTN0 628 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 CPVLQ9H3G5 476 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 HELLSQ9NRZ9 838 aa14.67□□□□□ -0.06
TREX1-204ENST00000492235 A0A0D9SFI3 127 aa14.66□□□□□ -0.06
TREX1-204ENST00000492235 RBAK-RBAKDNI3L0D1 243 aa14.66□□□□□ -0.06
TREX1-204ENST00000492235 MMP3P08254 477 aa14.66□□□□□ -0.06
TREX1-204ENST00000492235 GOLGA8HP0CJ92 632 aa14.66□□□□□ -0.06
TREX1-204ENST00000492235 WDR5P61964 334 aaKnown RBP14.66□□□□□ -0.06
TREX1-204ENST00000492235 GPNMBQ14956 572 aa14.66□□□□□ -0.06
TREX1-204ENST00000492235 LY6KQ17RY6 165 aa14.66□□□□□ -0.06
TREX1-204ENST00000492235 CCDC62Q6P9F0 684 aa14.66□□□□□ -0.06
TREX1-204ENST00000492235 CAGE1Q8TC20 777 aa14.66□□□□□ -0.06
TREX1-204ENST00000492235 GDPD5Q8WTR4 605 aa14.66□□□□□ -0.06
TREX1-204ENST00000492235 CTAGE1Q96RT6 745 aa14.66□□□□□ -0.06
TREX1-204ENST00000492235 ZBED2Q9BTP6 218 aa14.66□□□□□ -0.06
TREX1-204ENST00000492235 HCN4Q9Y3Q4 1203 aa14.66□□□□□ -0.06
TREX1-204ENST00000492235 GH1P01241 217 aa14.65□□□□□ -0.06
TREX1-204ENST00000492235 SNHG28P0DPA3 235 aa14.65□□□□□ -0.06
TREX1-204ENST00000492235 HSPD1P10809 573 aaKnown RBP14.65□□□□□ -0.06
TREX1-204ENST00000492235 SELPP16109 830 aa14.65□□□□□ -0.06
TREX1-204ENST00000492235 DEFB103AP81534 67 aa14.65□□□□□ -0.06
TREX1-204ENST00000492235 MCMDC2Q4G0Z9 681 aa14.65□□□□□ -0.06
TREX1-204ENST00000492235 LRRC8DQ7L1W4 858 aa14.65□□□□□ -0.06
TREX1-204ENST00000492235 TBC1D5Q92609 795 aa14.65□□□□□ -0.06
TREX1-204ENST00000492235 DHX38Q92620 1227 aaKnown RBP14.65□□□□□ -0.06
TREX1-204ENST00000492235 KAT2BQ92831 832 aa14.65□□□□□ -0.06
TREX1-204ENST00000492235 TTC14Q96N46 770 aa14.65□□□□□ -0.06
TREX1-204ENST00000492235 UBA5Q9GZZ9 404 aa14.65□□□□□ -0.06
TREX1-204ENST00000492235 ZBTB47Q9UFB7 747 aaPredicted RBP14.65□□□□□ -0.06
TREX1-204ENST00000492235 MTUS1Q9ULD2 1270 aa14.65□□□□□ -0.06
TREX1-204ENST00000492235 KIAA1217Q5T5P2 1943 aa14.64□□□□□ -0.07
TREX1-204ENST00000492235 ARHGAP1Q07960 439 aa14.64□□□□□ -0.07
TREX1-204ENST00000492235 TCTN1Q2MV58 587 aa14.64□□□□□ -0.07
TREX1-204ENST00000492235 TMEM31Q5JXX7 168 aa14.64□□□□□ -0.07
TREX1-204ENST00000492235 ANKRD45Q5TZF3 282 aa14.64□□□□□ -0.07
TREX1-204ENST00000492235 CNKSR3Q6P9H4 555 aa14.64□□□□□ -0.07
TREX1-204ENST00000492235 MFSD6Q6ZSS7 791 aa14.64□□□□□ -0.07
TREX1-204ENST00000492235 ZNF589Q86UQ0 364 aaPredicted RBP14.64□□□□□ -0.07
TREX1-204ENST00000492235 SESTD1Q86VW0 696 aa14.64□□□□□ -0.07
TREX1-204ENST00000492235 RGS22Q8NE09 1264 aa14.64□□□□□ -0.07
TREX1-204ENST00000492235 KHSRPQ92945 711 aaKnown RBP eCLIP14.64□□□□□ -0.07
TREX1-204ENST00000492235 TAAR1Q96RJ0 339 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms