RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 COL20A1Q9P218 1284 aa18.17■□□□□ 0.5
TRA2A-208ENST00000490942 ASTN1O14525 1302 aa18.17■□□□□ 0.5
TRA2A-208ENST00000490942 SPDYE3A6NKU9 549 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 JAK2O60674 1132 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 STAM2O75886 525 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 INHAP05111 366 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 CLK2P49760 499 aaKnown RBP18.16■□□□□ 0.5
TRA2A-208ENST00000490942 USP17L6PQ6QN14 398 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 ARMCX2Q7L311 632 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 HSCBQ8IWL3 235 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 EHMT1Q9H9B1 1298 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 PXMP2Q9NR77 195 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 VPS54Q9P1Q0 977 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 PCDHA4Q9UN74 947 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 CNPY2Q9Y2B0 182 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 RPTORQ8N122 1335 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 PLXNA1Q9UIW2 1896 aa18.16■□□□□ 0.5
TRA2A-208ENST00000490942 HOXA13P31271 388 aaPredicted RBP18.15■□□□□ 0.5
TRA2A-208ENST00000490942 NLRP5P59047 1200 aa18.15■□□□□ 0.5
TRA2A-208ENST00000490942 CACNB1Q02641 598 aaPredicted RBP18.15■□□□□ 0.5
TRA2A-208ENST00000490942 ARHGEF16Q5VV41 709 aa18.15■□□□□ 0.5
TRA2A-208ENST00000490942 REXO1Q8N1G1 1221 aaKnown RBP18.15■□□□□ 0.5
TRA2A-208ENST00000490942 TAAR1Q96RJ0 339 aa18.15■□□□□ 0.5
TRA2A-208ENST00000490942 PDCD2LQ9BRP1 358 aa18.15■□□□□ 0.5
TRA2A-208ENST00000490942 PHF20Q9BVI0 1012 aa18.15■□□□□ 0.5
TRA2A-208ENST00000490942 VTA1Q9NP79 307 aa18.15■□□□□ 0.5
TRA2A-208ENST00000490942 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.15■□□□□ 0.5
TRA2A-208ENST00000490942 MSCO60682 206 aa18.14■□□□□ 0.49
TRA2A-208ENST00000490942 PPFIA3O75145 1194 aa18.14■□□□□ 0.49
TRA2A-208ENST00000490942 SNAI1O95863 264 aaPredicted RBP18.14■□□□□ 0.49
TRA2A-208ENST00000490942 CYBAP13498 195 aa18.14■□□□□ 0.49
TRA2A-208ENST00000490942 PRKAR2AP13861 404 aaKnown RBP18.14■□□□□ 0.49
TRA2A-208ENST00000490942 CYP2C19P33261 490 aa18.14■□□□□ 0.49
TRA2A-208ENST00000490942 TRIM29Q14134 588 aa18.14■□□□□ 0.49
TRA2A-208ENST00000490942 VSIG10LQ86VR7 867 aa18.14■□□□□ 0.49
TRA2A-208ENST00000490942 FAM184AQ8NB25 1140 aa18.14■□□□□ 0.49
TRA2A-208ENST00000490942 SH3TC2Q8TF17 1288 aa18.14■□□□□ 0.49
TRA2A-208ENST00000490942 SHISA4Q96DD7 197 aa18.14■□□□□ 0.49
TRA2A-208ENST00000490942 BIN2Q9UBW5 565 aaPredicted RBP18.14■□□□□ 0.49
TRA2A-208ENST00000490942 LCTP09848 1927 aa18.13■□□□□ 0.49
TRA2A-208ENST00000490942 EIF3JO75822 258 aaKnown RBP18.13■□□□□ 0.49
TRA2A-208ENST00000490942 NR3C2P08235 984 aa18.13■□□□□ 0.49
TRA2A-208ENST00000490942 CACNB2Q08289 660 aaPredicted RBP18.13■□□□□ 0.49
TRA2A-208ENST00000490942 PDE4DQ08499 809 aa18.13■□□□□ 0.49
TRA2A-208ENST00000490942 STXBP2Q15833 593 aa18.13■□□□□ 0.49
TRA2A-208ENST00000490942 FCHSD1Q86WN1 690 aa18.13■□□□□ 0.49
TRA2A-208ENST00000490942 AIFM3Q96NN9 605 aa18.13■□□□□ 0.49
TRA2A-208ENST00000490942 PURBQ96QR8 312 aaKnown RBP18.13■□□□□ 0.49
TRA2A-208ENST00000490942 KATNBL1Q9H079 304 aa18.13■□□□□ 0.49
TRA2A-208ENST00000490942 BRMS1Q9HCU9 246 aa18.13■□□□□ 0.49
TRA2A-208ENST00000490942 HMX1Q9NP08 348 aaPredicted RBP18.13■□□□□ 0.49
TRA2A-208ENST00000490942 PCDHA6Q9UN73 950 aa18.13■□□□□ 0.49
TRA2A-208ENST00000490942 PCDHA8Q9Y5H6 950 aa18.13■□□□□ 0.49
TRA2A-208ENST00000490942 M0R2N6 131 aa18.12■□□□□ 0.49
TRA2A-208ENST00000490942 ACVR2BQ13705 512 aa18.12■□□□□ 0.49
TRA2A-208ENST00000490942 PGM5Q15124 567 aa18.12■□□□□ 0.49
TRA2A-208ENST00000490942 NPY5RQ15761 445 aa18.12■□□□□ 0.49
TRA2A-208ENST00000490942 PCNX4Q63HM2 1172 aa18.12■□□□□ 0.49
TRA2A-208ENST00000490942 BLIDQ8IZY5 108 aa18.12■□□□□ 0.49
TRA2A-208ENST00000490942 FBXO18Q8NFZ0 1043 aa18.12■□□□□ 0.49
TRA2A-208ENST00000490942 PAK6Q9NQU5 681 aaPredicted RBP18.12■□□□□ 0.49
TRA2A-208ENST00000490942 SMC3Q9UQE7 1217 aa18.12■□□□□ 0.49
TRA2A-208ENST00000490942 RBM47A0AV96 593 aaKnown RBP18.11■□□□□ 0.49
TRA2A-208ENST00000490942 SEPT4O43236 478 aa18.11■□□□□ 0.49
TRA2A-208ENST00000490942 MMP1P03956 469 aa18.11■□□□□ 0.49
TRA2A-208ENST00000490942 ZNF865P0CJ78 1059 aaPredicted RBP18.11■□□□□ 0.49
TRA2A-208ENST00000490942 EIF2AK2P19525 551 aaKnown RBP18.11■□□□□ 0.49
TRA2A-208ENST00000490942 CCND2P30279 289 aa18.11■□□□□ 0.49
TRA2A-208ENST00000490942 SREBF1P36956 1147 aa18.11■□□□□ 0.49
TRA2A-208ENST00000490942 UBE2SQ16763 222 aa18.11■□□□□ 0.49
TRA2A-208ENST00000490942 C8orf76Q96K31 380 aa18.11■□□□□ 0.49
TRA2A-208ENST00000490942 ANO3Q9BYT9 981 aa18.11■□□□□ 0.49
TRA2A-208ENST00000490942 PDIA4P13667 645 aaKnown RBP18.1■□□□□ 0.49
TRA2A-208ENST00000490942 AKR1A1P14550 325 aa18.1■□□□□ 0.49
TRA2A-208ENST00000490942 PDCP20941 246 aa18.1■□□□□ 0.49
TRA2A-208ENST00000490942 TRIM32Q13049 653 aa18.1■□□□□ 0.49
TRA2A-208ENST00000490942 SAFBQ15424 915 aaKnown RBP eCLIP18.1■□□□□ 0.49
TRA2A-208ENST00000490942 KRT40Q6A162 431 aa18.1■□□□□ 0.49
TRA2A-208ENST00000490942 KCNV1Q6PIU1 500 aa18.1■□□□□ 0.49
TRA2A-208ENST00000490942 KRT25Q7Z3Z0 450 aa18.1■□□□□ 0.49
TRA2A-208ENST00000490942 TNS4Q8IZW8 715 aa18.1■□□□□ 0.49
TRA2A-208ENST00000490942 CRYGNQ8WXF5 182 aa18.1■□□□□ 0.49
TRA2A-208ENST00000490942 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.1■□□□□ 0.493e-9■■□□□ 13.6
TRA2A-208ENST00000490942 FAM184BQ9ULE4 1060 aa18.1■□□□□ 0.49
TRA2A-208ENST00000490942 MAFGO15525 162 aa18.09■□□□□ 0.49
TRA2A-208ENST00000490942 GJB1P08034 283 aa18.09■□□□□ 0.49
TRA2A-208ENST00000490942 CYP3A4P08684 503 aa18.09■□□□□ 0.49
TRA2A-208ENST00000490942 TGFB3P10600 412 aa18.09■□□□□ 0.49
TRA2A-208ENST00000490942 CCL5P13501 91 aa18.09■□□□□ 0.49
TRA2A-208ENST00000490942 GJB2P29033 226 aa18.09■□□□□ 0.49
TRA2A-208ENST00000490942 KRT2P35908 639 aa18.09■□□□□ 0.49
TRA2A-208ENST00000490942 GNPTABQ3T906 1256 aa18.09■□□□□ 0.49
TRA2A-208ENST00000490942 IQSEC1Q6DN90 963 aa18.09■□□□□ 0.49
TRA2A-208ENST00000490942 TRPV1Q8NER1 839 aa18.09■□□□□ 0.49
TRA2A-208ENST00000490942 SCFD2Q8WU76 684 aa18.09■□□□□ 0.49
TRA2A-208ENST00000490942 ABHD8Q96I13 439 aa18.09■□□□□ 0.49
TRA2A-208ENST00000490942 INPP4AQ96PE3 977 aaPredicted RBP18.09■□□□□ 0.49
TRA2A-208ENST00000490942 KCNJ14Q9UNX9 436 aa18.09■□□□□ 0.49
TRA2A-208ENST00000490942 NKRFO15226 690 aaKnown RBP eCLIP18.08■□□□□ 0.481e-12■■□□□ 11.7
TRA2A-208ENST00000490942 ICAM3P32942 547 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms