RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 MTMR8Q96EF0 704 aa13.28□□□□□ -0.28
CCM2-213ENST00000480658 LRCH3Q96II8 777 aa13.28□□□□□ -0.28
CCM2-213ENST00000480658 RNPC3Q96LT9 517 aaKnown RBP13.28□□□□□ -0.28
CCM2-213ENST00000480658 KATNAL1Q9BW62 490 aa13.28□□□□□ -0.28
CCM2-213ENST00000480658 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
CCM2-213ENST00000480658 LAMA3Q16787 3333 aa13.27□□□□□ -0.28
CCM2-213ENST00000480658 PNMA6FA0A0J9YX94 578 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 CCDC69A6NI79 296 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 A6NJR5 290 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 SOX1O00570 391 aaPredicted RBP13.27□□□□□ -0.29
CCM2-213ENST00000480658 GH1P01241 217 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 TXNP10599 105 aaKnown RBP13.27□□□□□ -0.29
CCM2-213ENST00000480658 HSD17B4P51659 736 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 BEX3Q00994 111 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 PTH1RQ03431 593 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 TROAPQ12815 778 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 KRT32Q14532 448 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 CYB5R4Q7L1T6 521 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 RPUSD2Q8IZ73 545 aaKnown RBP13.27□□□□□ -0.29
CCM2-213ENST00000480658 CCDC155Q8N6L0 562 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 SYTL5Q8TDW5 730 aaPredicted RBP13.27□□□□□ -0.29
CCM2-213ENST00000480658 ESYT1Q9BSJ8 1104 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 SPZ1Q9BXG8 430 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 IL25Q9H293 177 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 RIOX1Q9H6W3 641 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 ANO2Q9NQ90 1003 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 LCTP09848 1927 aa13.27□□□□□ -0.29
CCM2-213ENST00000480658 SMCHD1A6NHR9 2005 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 GCOM1H8Y6P7 765 aaPredicted RBP13.26□□□□□ -0.29
CCM2-213ENST00000480658 MCM3APO60318 1980 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 CFBP00751 764 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 CD4P01730 458 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 HMGB1P09429 215 aaKnown RBP13.26□□□□□ -0.29
CCM2-213ENST00000480658 POLR2MP0CAP2 368 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 TGFB3P10600 412 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 LIFRP42702 1097 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 PURAQ00577 322 aaKnown RBP13.26□□□□□ -0.29
CCM2-213ENST00000480658 GNPTABQ3T906 1256 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 SYNE3Q6ZMZ3 975 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 NFXL1Q6ZNB6 911 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 DNAH12Q6ZR08 3092 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 SH3RF1Q7Z6J0 888 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 MB21D2Q8IYB1 491 aaPredicted RBP13.26□□□□□ -0.29
CCM2-213ENST00000480658 EMID1Q96A84 441 aaPredicted RBP13.26□□□□□ -0.29
CCM2-213ENST00000480658 RRP36Q96EU6 259 aaKnown RBP13.26□□□□□ -0.29
CCM2-213ENST00000480658 HIPK3Q9H422 1215 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 VAT1LQ9HCJ6 419 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 PDGFCQ9NRA1 345 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 STXBP5LQ9Y2K9 1186 aa13.26□□□□□ -0.29
CCM2-213ENST00000480658 PARNO95453 639 aaKnown RBP13.25□□□□□ -0.29
CCM2-213ENST00000480658 CASTP20810 708 aaKnown RBP13.25□□□□□ -0.29
CCM2-213ENST00000480658 CCND2P30279 289 aa13.25□□□□□ -0.29
CCM2-213ENST00000480658 RFC2P35250 354 aa13.25□□□□□ -0.29
CCM2-213ENST00000480658 LAMC2Q13753 1193 aa13.25□□□□□ -0.29
CCM2-213ENST00000480658 SHHQ15465 462 aa13.25□□□□□ -0.29
CCM2-213ENST00000480658 DGKDQ16760 1214 aa13.25□□□□□ -0.29
CCM2-213ENST00000480658 XRRA1Q6P2D8 792 aa13.25□□□□□ -0.29
CCM2-213ENST00000480658 STOX1Q6ZVD7 989 aa13.25□□□□□ -0.29
CCM2-213ENST00000480658 HOMER1Q86YM7 354 aa13.25□□□□□ -0.29
CCM2-213ENST00000480658 STAG2Q8N3U4 1231 aa13.25□□□□□ -0.29
CCM2-213ENST00000480658 CUL5Q93034 780 aa13.25□□□□□ -0.29
CCM2-213ENST00000480658 PXMP2Q9NR77 195 aa13.25□□□□□ -0.29
CCM2-213ENST00000480658 MRVI1Q9Y6F6 885 aa13.25□□□□□ -0.29
CCM2-213ENST00000480658 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
CCM2-213ENST00000480658 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
CCM2-213ENST00000480658 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
CCM2-213ENST00000480658 PRC1O43663 620 aa13.24□□□□□ -0.29
CCM2-213ENST00000480658 CDC45O75419 566 aa13.24□□□□□ -0.29
CCM2-213ENST00000480658 NR3C2P08235 984 aa13.24□□□□□ -0.29
CCM2-213ENST00000480658 MYL3P08590 195 aa13.24□□□□□ -0.29
CCM2-213ENST00000480658 ZNF654Q8IZM8 581 aa13.24□□□□□ -0.29
CCM2-213ENST00000480658 PPTC7Q8NI37 304 aa13.24□□□□□ -0.29
CCM2-213ENST00000480658 IGDCC4Q8TDY8 1250 aa13.24□□□□□ -0.29
CCM2-213ENST00000480658 PURBQ96QR8 312 aaKnown RBP13.24□□□□□ -0.29
CCM2-213ENST00000480658 LSG1Q9H089 658 aaKnown RBP13.24□□□□□ -0.29
CCM2-213ENST00000480658 ALDH8A1Q9H2A2 487 aaPredicted RBP13.24□□□□□ -0.29
CCM2-213ENST00000480658 CPVLQ9H3G5 476 aa13.24□□□□□ -0.29
CCM2-213ENST00000480658 NOD1Q9Y239 953 aa13.24□□□□□ -0.29
CCM2-213ENST00000480658 SLC12A7Q9Y666 1083 aa13.24□□□□□ -0.29
CCM2-213ENST00000480658 SZT2Q5T011 3432 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 NEFLP07196 543 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 EIF2AK2P19525 551 aaKnown RBP13.23□□□□□ -0.29
CCM2-213ENST00000480658 RCAN1P53805 252 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 BFSP2Q13515 415 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 NECTIN1Q15223 517 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 CREB3L3Q68CJ9 461 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 CCDC62Q6P9F0 684 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 SESTD1Q86VW0 696 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 SGMS1Q86VZ5 419 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 CAGE1Q8TC20 777 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 TAAR1Q96RJ0 339 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 PIGSQ96S52 555 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 PDCD2LQ9BRP1 358 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 EHMT1Q9H9B1 1298 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 LY9Q9HBG7 655 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 IL23AQ9NPF7 189 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 RBM28Q9NW13 759 aaKnown RBP13.23□□□□□ -0.29
CCM2-213ENST00000480658 MTMR10Q9NXD2 777 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 MYH6P13533 1939 aa13.23□□□□□ -0.29
CCM2-213ENST00000480658 hCG_1984214I3L0E3 225 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms