RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 FOSP01100 380 aaPredicted RBP16.05■□□□□ 0.16
PCIF1-202ENST00000479348 CYBAP13498 195 aa16.05■□□□□ 0.16
PCIF1-202ENST00000479348 CCL5P13501 91 aa16.05■□□□□ 0.16
PCIF1-202ENST00000479348 EDNRBP24530 442 aa16.05■□□□□ 0.16
PCIF1-202ENST00000479348 HMGN5P82970 282 aaKnown RBP16.05■□□□□ 0.16
PCIF1-202ENST00000479348 ST3GAL1Q11201 340 aa16.05■□□□□ 0.16
PCIF1-202ENST00000479348 TRIM32Q13049 653 aa16.05■□□□□ 0.16
PCIF1-202ENST00000479348 ARHGEF16Q5VV41 709 aa16.05■□□□□ 0.16
PCIF1-202ENST00000479348 GALNT17Q6IS24 598 aa16.05■□□□□ 0.16
PCIF1-202ENST00000479348 BICD2Q8TD16 824 aa16.05■□□□□ 0.16
PCIF1-202ENST00000479348 PURBQ96QR8 312 aaKnown RBP16.05■□□□□ 0.16
PCIF1-202ENST00000479348 PXMP2Q9NR77 195 aa16.05■□□□□ 0.16
PCIF1-202ENST00000479348 MSCO60682 206 aa16.04■□□□□ 0.16
PCIF1-202ENST00000479348 PDE4DQ08499 809 aa16.04■□□□□ 0.16
PCIF1-202ENST00000479348 USP17L6PQ6QN14 398 aa16.04■□□□□ 0.16
PCIF1-202ENST00000479348 FCHSD1Q86WN1 690 aa16.04■□□□□ 0.16
PCIF1-202ENST00000479348 TMEM106CQ9BVX2 250 aa16.04■□□□□ 0.16
PCIF1-202ENST00000479348 RNF208Q9H0X6 261 aa16.04■□□□□ 0.16
PCIF1-202ENST00000479348 EHMT1Q9H9B1 1298 aa16.04■□□□□ 0.16
PCIF1-202ENST00000479348 VTA1Q9NP79 307 aa16.04■□□□□ 0.16
PCIF1-202ENST00000479348 SPDYE3A6NKU9 549 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 NR3C2P08235 984 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 FDPSP14324 419 aaKnown RBP16.03■□□□□ 0.16
PCIF1-202ENST00000479348 NLRP5P59047 1200 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 AP3B2Q13367 1082 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 ACVR2BQ13705 512 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 MTFR1Q15390 333 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 STXBP2Q15833 593 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 XRRA1Q6P2D8 792 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 SNX21Q969T3 373 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 PDCD2LQ9BRP1 358 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 ALG1Q9BT22 464 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.03■□□□□ 0.16
PCIF1-202ENST00000479348 UNC93B1Q9H1C4 597 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 PAK6Q9NQU5 681 aaPredicted RBP16.03■□□□□ 0.16
PCIF1-202ENST00000479348 VPS54Q9P1Q0 977 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 FRMPD4Q14CM0 1322 aa16.03■□□□□ 0.16
PCIF1-202ENST00000479348 LCTP09848 1927 aa16.02■□□□□ 0.16
PCIF1-202ENST00000479348 SEPT4O43236 478 aa16.02■□□□□ 0.16
PCIF1-202ENST00000479348 STAM2O75886 525 aa16.02■□□□□ 0.16
PCIF1-202ENST00000479348 GJB1P08034 283 aa16.02■□□□□ 0.16
PCIF1-202ENST00000479348 ZNF865P0CJ78 1059 aaPredicted RBP16.02■□□□□ 0.16
PCIF1-202ENST00000479348 CLK2P49760 499 aaKnown RBP16.02■□□□□ 0.16
PCIF1-202ENST00000479348 KATNBL1Q9H079 304 aa16.02■□□□□ 0.16
PCIF1-202ENST00000479348 FAM184BQ9ULE4 1060 aa16.02■□□□□ 0.16
PCIF1-202ENST00000479348 KIF3AQ9Y496 699 aa16.02■□□□□ 0.16
PCIF1-202ENST00000479348 JAK2O60674 1132 aa16.01■□□□□ 0.15
PCIF1-202ENST00000479348 EIF3JO75822 258 aaKnown RBP16.01■□□□□ 0.15
PCIF1-202ENST00000479348 EIF2AK2P19525 551 aaKnown RBP16.01■□□□□ 0.15
PCIF1-202ENST00000479348 CNGA1P29973 690 aa16.01■□□□□ 0.15
PCIF1-202ENST00000479348 CCND2P30279 289 aa16.01■□□□□ 0.15
PCIF1-202ENST00000479348 CCND3P30281 292 aaPredicted RBP16.01■□□□□ 0.15
PCIF1-202ENST00000479348 PGM5Q15124 567 aa16.01■□□□□ 0.15
PCIF1-202ENST00000479348 UBE2SQ16763 222 aa16.01■□□□□ 0.15
PCIF1-202ENST00000479348 PRAMEF19Q5SWL8 479 aa16.01■□□□□ 0.15
PCIF1-202ENST00000479348 VSIG10LQ86VR7 867 aa16.01■□□□□ 0.15
PCIF1-202ENST00000479348 REXO1Q8N1G1 1221 aaKnown RBP16.01■□□□□ 0.15
PCIF1-202ENST00000479348 DAGLBQ8NCG7 672 aa16.01■□□□□ 0.15
PCIF1-202ENST00000479348 TRPV1Q8NER1 839 aa16.01■□□□□ 0.15
PCIF1-202ENST00000479348 AIFM3Q96NN9 605 aa16.01■□□□□ 0.15
PCIF1-202ENST00000479348 PCDHA6Q9UN73 950 aa16.01■□□□□ 0.15
PCIF1-202ENST00000479348 PCDHA4Q9UN74 947 aa16.01■□□□□ 0.15
PCIF1-202ENST00000479348 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.01■□□□□ 0.15
PCIF1-202ENST00000479348 PCDHA8Q9Y5H6 950 aa16.01■□□□□ 0.15
PCIF1-202ENST00000479348 AKR1A1P14550 325 aa16■□□□□ 0.15
PCIF1-202ENST00000479348 CUL4AQ13619 759 aa16■□□□□ 0.15
PCIF1-202ENST00000479348 TRIM29Q14134 588 aa16■□□□□ 0.15
PCIF1-202ENST00000479348 PCNX4Q63HM2 1172 aa16■□□□□ 0.15
PCIF1-202ENST00000479348 IQSEC1Q6DN90 963 aa16■□□□□ 0.15
PCIF1-202ENST00000479348 FAM184AQ8NB25 1140 aa16■□□□□ 0.15
PCIF1-202ENST00000479348 PHF20Q9BVI0 1012 aa16■□□□□ 0.15
PCIF1-202ENST00000479348 DDX20Q9UHI6 824 aaKnown RBP16■□□□□ 0.15
PCIF1-202ENST00000479348 ZHX1Q9UKY1 873 aaPredicted RBP16■□□□□ 0.15
PCIF1-202ENST00000479348 RBM47A0AV96 593 aaKnown RBP15.99■□□□□ 0.15
PCIF1-202ENST00000479348 K7ELQ4 463 aaPredicted RBP15.99■□□□□ 0.15
PCIF1-202ENST00000479348 SGPL1O95470 568 aa15.99■□□□□ 0.15
PCIF1-202ENST00000479348 MYCP01106 439 aaPredicted RBP15.99■□□□□ 0.15
PCIF1-202ENST00000479348 GJA8P48165 433 aa15.99■□□□□ 0.15
PCIF1-202ENST00000479348 CCDC144BQ3MJ40 725 aa15.99■□□□□ 0.15
PCIF1-202ENST00000479348 TAPT1Q6NXT6 567 aa15.99■□□□□ 0.15
PCIF1-202ENST00000479348 BLIDQ8IZY5 108 aa15.99■□□□□ 0.15
PCIF1-202ENST00000479348 SHISA4Q96DD7 197 aa15.99■□□□□ 0.15
PCIF1-202ENST00000479348 ANO3Q9BYT9 981 aa15.99■□□□□ 0.15
PCIF1-202ENST00000479348 CCDC85CA6NKD9 419 aa15.98■□□□□ 0.15
PCIF1-202ENST00000479348 MYCLP12524 364 aaPredicted RBP15.98■□□□□ 0.15
PCIF1-202ENST00000479348 SREBF1P36956 1147 aa15.98■□□□□ 0.15
PCIF1-202ENST00000479348 LHX8Q68G74 356 aa15.98■□□□□ 0.15
PCIF1-202ENST00000479348 KCNV1Q6PIU1 500 aa15.98■□□□□ 0.15
PCIF1-202ENST00000479348 EEPD1Q7L9B9 569 aa15.98■□□□□ 0.15
PCIF1-202ENST00000479348 U2AF1L4Q8WU68 220 aaKnown RBP15.98■□□□□ 0.15
PCIF1-202ENST00000479348 SCFD2Q8WU76 684 aa15.98■□□□□ 0.15
PCIF1-202ENST00000479348 DEFB118Q96PH6 123 aa15.98■□□□□ 0.15
PCIF1-202ENST00000479348 CRISPLD2Q9H0B8 497 aa15.98■□□□□ 0.15
PCIF1-202ENST00000479348 BRMS1Q9HCU9 246 aa15.98■□□□□ 0.15
PCIF1-202ENST00000479348 MCM3APO60318 1980 aa15.98■□□□□ 0.15
PCIF1-202ENST00000479348 NKRFO15226 690 aaKnown RBP eCLIP15.97■□□□□ 0.15
PCIF1-202ENST00000479348 DUSP11O75319 330 aaKnown RBP15.97■□□□□ 0.15
PCIF1-202ENST00000479348 TGFB3P10600 412 aa15.97■□□□□ 0.15
PCIF1-202ENST00000479348 RARBP10826 455 aa15.97■□□□□ 0.15
PCIF1-202ENST00000479348 TNFAIP2Q03169 654 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms