RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 CXCL17Q6UXB2 119 aa15.97■□□□□ 0.15
TMCO1-205ENST00000476143 MTMR8Q96EF0 704 aa15.97■□□□□ 0.15
TMCO1-205ENST00000476143 NEK1Q96PY6 1258 aa15.97■□□□□ 0.15
TMCO1-205ENST00000476143 PIGSQ96S52 555 aa15.97■□□□□ 0.15
TMCO1-205ENST00000476143 LY9Q9HBG7 655 aa15.97■□□□□ 0.15
TMCO1-205ENST00000476143 TAF6LQ9Y6J9 622 aa15.97■□□□□ 0.15
TMCO1-205ENST00000476143 DDX49Q9Y6V7 483 aaKnown RBP15.97■□□□□ 0.15
TMCO1-205ENST00000476143 LTBP2Q14767 1821 aa15.96■□□□□ 0.15
TMCO1-205ENST00000476143 RBM47A0AV96 593 aaKnown RBP15.96■□□□□ 0.15
TMCO1-205ENST00000476143 GCOM1H8Y6P7 765 aaPredicted RBP15.96■□□□□ 0.15
TMCO1-205ENST00000476143 SH2B2O14492 632 aaPredicted RBP15.96■□□□□ 0.15
TMCO1-205ENST00000476143 KIAA0355O15063 1070 aa15.96■□□□□ 0.15
TMCO1-205ENST00000476143 KPNA6O60684 536 aa15.96■□□□□ 0.15
TMCO1-205ENST00000476143 CENPBP07199 599 aaPredicted RBP15.96■□□□□ 0.15
TMCO1-205ENST00000476143 HMGB1P09429 215 aaKnown RBP15.96■□□□□ 0.15
TMCO1-205ENST00000476143 POLR2MP0CAP2 368 aa15.96■□□□□ 0.15
TMCO1-205ENST00000476143 TXNP10599 105 aaKnown RBP15.96■□□□□ 0.15
TMCO1-205ENST00000476143 SMARCA1P28370 1054 aa15.96■□□□□ 0.15
TMCO1-205ENST00000476143 FGD1P98174 961 aa15.96■□□□□ 0.15
TMCO1-205ENST00000476143 LRIT3Q3SXY7 679 aa15.96■□□□□ 0.15
TMCO1-205ENST00000476143 SKAP1Q86WV1 359 aa15.96■□□□□ 0.15
TMCO1-205ENST00000476143 BADQ92934 168 aa15.96■□□□□ 0.15
TMCO1-205ENST00000476143 CUL5Q93034 780 aa15.96■□□□□ 0.15
TMCO1-205ENST00000476143 TAAR1Q96RJ0 339 aa15.96■□□□□ 0.15
TMCO1-205ENST00000476143 REC8O95072 547 aa15.95■□□□□ 0.14
TMCO1-205ENST00000476143 MYL3P08590 195 aa15.95■□□□□ 0.14
TMCO1-205ENST00000476143 EIF2AK2P19525 551 aaKnown RBP15.95■□□□□ 0.14
TMCO1-205ENST00000476143 HSD17B4P51659 736 aa15.95■□□□□ 0.14
TMCO1-205ENST00000476143 ITGA7Q13683 1181 aa15.95■□□□□ 0.14
TMCO1-205ENST00000476143 SEPT14Q6ZU15 432 aa15.95■□□□□ 0.14
TMCO1-205ENST00000476143 SPZ1Q9BXG8 430 aa15.95■□□□□ 0.14
TMCO1-205ENST00000476143 SENP2Q9HC62 589 aa15.95■□□□□ 0.14
TMCO1-205ENST00000476143 PCDH10Q9P2E7 1040 aa15.95■□□□□ 0.14
TMCO1-205ENST00000476143 CTAGE5O15320 804 aa15.94■□□□□ 0.14
TMCO1-205ENST00000476143 EIF3JO75822 258 aaKnown RBP15.94■□□□□ 0.14
TMCO1-205ENST00000476143 FPGSQ05932 587 aa15.94■□□□□ 0.14
TMCO1-205ENST00000476143 FAAP100Q0VG06 881 aa15.94■□□□□ 0.14
TMCO1-205ENST00000476143 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
TMCO1-205ENST00000476143 KCNV1Q6PIU1 500 aa15.94■□□□□ 0.14
TMCO1-205ENST00000476143 SH3RF1Q7Z6J0 888 aa15.94■□□□□ 0.14
TMCO1-205ENST00000476143 PIBF1Q8WXW3 757 aa15.94■□□□□ 0.14
TMCO1-205ENST00000476143 TBC1D5Q92609 795 aa15.94■□□□□ 0.14
TMCO1-205ENST00000476143 MTG1Q9BT17 334 aaPredicted RBP15.94■□□□□ 0.14
TMCO1-205ENST00000476143 MYL10Q9BUA6 226 aa15.94■□□□□ 0.14
TMCO1-205ENST00000476143 PXMP2Q9NR77 195 aa15.94■□□□□ 0.14
TMCO1-205ENST00000476143 MRVI1Q9Y6F6 885 aa15.94■□□□□ 0.14
TMCO1-205ENST00000476143 KIAA1217Q5T5P2 1943 aa15.94■□□□□ 0.14
TMCO1-205ENST00000476143 BAZ2BQ9UIF8 2168 aaKnown RBP15.93■□□□□ 0.14
TMCO1-205ENST00000476143 TRIM43BA6NCK2 446 aa15.93■□□□□ 0.14
TMCO1-205ENST00000476143 GH1P01241 217 aa15.93■□□□□ 0.14
TMCO1-205ENST00000476143 NR3C2P08235 984 aa15.93■□□□□ 0.14
TMCO1-205ENST00000476143 MYCLP12524 364 aaPredicted RBP15.93■□□□□ 0.14
TMCO1-205ENST00000476143 CDK7P50613 346 aa15.93■□□□□ 0.14
TMCO1-205ENST00000476143 IRX5P78411 483 aaPredicted RBP15.93■□□□□ 0.14
TMCO1-205ENST00000476143 GHRHRQ02643 423 aa15.93■□□□□ 0.14
TMCO1-205ENST00000476143 GPR153Q6NV75 609 aa15.93■□□□□ 0.14
TMCO1-205ENST00000476143 DHX32Q7L7V1 743 aaKnown RBP15.93■□□□□ 0.14
TMCO1-205ENST00000476143 MICU3Q86XE3 530 aa15.93■□□□□ 0.14
TMCO1-205ENST00000476143 TMEM199Q8N511 208 aa15.93■□□□□ 0.14
TMCO1-205ENST00000476143 SMARCC2Q8TAQ2 1214 aa15.93■□□□□ 0.14
TMCO1-205ENST00000476143 TRIM43Q96BQ3 446 aaPredicted RBP15.93■□□□□ 0.14
TMCO1-205ENST00000476143 RBM28Q9NW13 759 aaKnown RBP15.93■□□□□ 0.14
TMCO1-205ENST00000476143 COL20A1Q9P218 1284 aa15.93■□□□□ 0.14
TMCO1-205ENST00000476143 CYTH3O43739 400 aa15.92■□□□□ 0.14
TMCO1-205ENST00000476143 TIMP1P01033 207 aa15.92■□□□□ 0.14
TMCO1-205ENST00000476143 SUPT20HL2P0C7V6 817 aa15.92■□□□□ 0.14
TMCO1-205ENST00000476143 CCND2P30279 289 aa15.92■□□□□ 0.14
TMCO1-205ENST00000476143 HOXA13P31271 388 aaPredicted RBP15.92■□□□□ 0.14
TMCO1-205ENST00000476143 PPIGQ13427 754 aaKnown RBP eCLIP15.92■□□□□ 0.14
TMCO1-205ENST00000476143 GNPTABQ3T906 1256 aa15.92■□□□□ 0.14
TMCO1-205ENST00000476143 FAM47CQ5HY64 1035 aa15.92■□□□□ 0.14
TMCO1-205ENST00000476143 ERICH6BQ5W0A0 696 aa15.92■□□□□ 0.14
TMCO1-205ENST00000476143 SGMS1Q86VZ5 419 aa15.92■□□□□ 0.14
TMCO1-205ENST00000476143 FCHSD1Q86WN1 690 aa15.92■□□□□ 0.14
TMCO1-205ENST00000476143 FAM126BQ8IXS8 530 aa15.92■□□□□ 0.14
TMCO1-205ENST00000476143 PPP1R11O60927 126 aaPredicted RBP15.91■□□□□ 0.14
TMCO1-205ENST00000476143 CASTP20810 708 aaKnown RBP15.91■□□□□ 0.14
TMCO1-205ENST00000476143 PURAQ00577 322 aaKnown RBP15.91■□□□□ 0.14
TMCO1-205ENST00000476143 TSGA10IPQ3SY00 556 aa15.91■□□□□ 0.14
TMCO1-205ENST00000476143 FANCBQ8NB91 859 aa15.91■□□□□ 0.14
TMCO1-205ENST00000476143 PDCD2LQ9BRP1 358 aa15.91■□□□□ 0.14
TMCO1-205ENST00000476143 LRRC2Q9BYS8 371 aa15.91■□□□□ 0.14
TMCO1-205ENST00000476143 NAP1L2Q9ULW6 460 aaPredicted RBP15.91■□□□□ 0.14
TMCO1-205ENST00000476143 A6NJR5 290 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 ZBTB43O43298 467 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 STAM2O75886 525 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 RXRAP19793 462 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 PSMA5P28066 241 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 PSMC6P62333 389 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 LAMC2Q13753 1193 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 PGM5Q15124 567 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 MFSD5Q6N075 450 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 DHX37Q8IY37 1157 aaKnown RBP15.9■□□□□ 0.14
TMCO1-205ENST00000476143 LRCH3Q96II8 777 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 RNPC3Q96LT9 517 aaKnown RBP15.9■□□□□ 0.14
TMCO1-205ENST00000476143 KATNAL1Q9BW62 490 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 PPP1R12CQ9BZL4 782 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 MTIF3Q9H2K0 278 aaKnown RBP15.9■□□□□ 0.14
TMCO1-205ENST00000476143 PPP4R2Q9NY27 417 aa15.9■□□□□ 0.14
TMCO1-205ENST00000476143 TBX21Q9UL17 535 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms