RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 OR6J1Q8NGC5 347 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 TBC1D5Q92609 795 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 TRIM43Q96BQ3 446 aaPredicted RBP17.29■□□□□ 0.36
HOXB3-206ENST00000471459 TAAR1Q96RJ0 339 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 RIOX1Q9H6W3 641 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 CTAGE5O15320 804 aa17.28■□□□□ 0.36
HOXB3-206ENST00000471459 CDK7P50613 346 aa17.28■□□□□ 0.36
HOXB3-206ENST00000471459 ITGA7Q13683 1181 aa17.28■□□□□ 0.36
HOXB3-206ENST00000471459 ZNF654Q8IZM8 581 aa17.28■□□□□ 0.36
HOXB3-206ENST00000471459 MTMR8Q96EF0 704 aa17.28■□□□□ 0.36
HOXB3-206ENST00000471459 RRP36Q96EU6 259 aaKnown RBP17.28■□□□□ 0.36
HOXB3-206ENST00000471459 PIGSQ96S52 555 aa17.28■□□□□ 0.36
HOXB3-206ENST00000471459 SEC63Q9UGP8 760 aaKnown RBP17.28■□□□□ 0.36
HOXB3-206ENST00000471459 GCOM1H8Y6P7 765 aaPredicted RBP17.27■□□□□ 0.36
HOXB3-206ENST00000471459 EIF3JO75822 258 aaKnown RBP17.27■□□□□ 0.36
HOXB3-206ENST00000471459 POLR2MP0CAP2 368 aa17.27■□□□□ 0.36
HOXB3-206ENST00000471459 SMARCA1P28370 1054 aa17.27■□□□□ 0.36
HOXB3-206ENST00000471459 LIFRP42702 1097 aa17.27■□□□□ 0.36
HOXB3-206ENST00000471459 ANTXR2P58335 489 aa17.27■□□□□ 0.36
HOXB3-206ENST00000471459 KRT32Q14532 448 aa17.27■□□□□ 0.36
HOXB3-206ENST00000471459 SEPT14Q6ZU15 432 aa17.27■□□□□ 0.36
HOXB3-206ENST00000471459 LY9Q9HBG7 655 aa17.27■□□□□ 0.36
HOXB3-206ENST00000471459 SENP2Q9HC62 589 aa17.27■□□□□ 0.36
HOXB3-206ENST00000471459 SLC12A7Q9Y666 1083 aa17.27■□□□□ 0.36
HOXB3-206ENST00000471459 TIMP1P01033 207 aa17.26■□□□□ 0.35
HOXB3-206ENST00000471459 NR3C2P08235 984 aa17.26■□□□□ 0.35
HOXB3-206ENST00000471459 MYL3P08590 195 aa17.26■□□□□ 0.35
HOXB3-206ENST00000471459 EIF2AK2P19525 551 aaKnown RBP17.26■□□□□ 0.35
HOXB3-206ENST00000471459 HSD17B4P51659 736 aa17.26■□□□□ 0.35
HOXB3-206ENST00000471459 FPGSQ05932 587 aa17.26■□□□□ 0.35
HOXB3-206ENST00000471459 TMEM199Q8N511 208 aa17.26■□□□□ 0.35
HOXB3-206ENST00000471459 LRCH3Q96II8 777 aa17.26■□□□□ 0.35
HOXB3-206ENST00000471459 NEK1Q96PY6 1258 aa17.26■□□□□ 0.35
HOXB3-206ENST00000471459 SOX1O00570 391 aaPredicted RBP17.25■□□□□ 0.35
HOXB3-206ENST00000471459 SH2B2O14492 632 aaPredicted RBP17.25■□□□□ 0.35
HOXB3-206ENST00000471459 SUPT20HL2P0C7V6 817 aa17.25■□□□□ 0.35
HOXB3-206ENST00000471459 KCNV1Q6PIU1 500 aa17.25■□□□□ 0.35
HOXB3-206ENST00000471459 SKAP1Q86WV1 359 aa17.25■□□□□ 0.35
HOXB3-206ENST00000471459 PIBF1Q8WXW3 757 aa17.25■□□□□ 0.35
HOXB3-206ENST00000471459 CUL5Q93034 780 aa17.25■□□□□ 0.35
HOXB3-206ENST00000471459 MTG1Q9BT17 334 aaPredicted RBP17.25■□□□□ 0.35
HOXB3-206ENST00000471459 PXMP2Q9NR77 195 aa17.25■□□□□ 0.35
HOXB3-206ENST00000471459 PPP1R11O60927 126 aaPredicted RBP17.24■□□□□ 0.35
HOXB3-206ENST00000471459 GH1P01241 217 aa17.24■□□□□ 0.35
HOXB3-206ENST00000471459 HMGB1P09429 215 aaKnown RBP17.24■□□□□ 0.35
HOXB3-206ENST00000471459 MYCLP12524 364 aaPredicted RBP17.24■□□□□ 0.35
HOXB3-206ENST00000471459 FGD1P98174 961 aa17.24■□□□□ 0.35
HOXB3-206ENST00000471459 PPIGQ13427 754 aaKnown RBP eCLIP17.24■□□□□ 0.35
HOXB3-206ENST00000471459 SHHQ15465 462 aa17.24■□□□□ 0.35
HOXB3-206ENST00000471459 TMEM63BQ5T3F8 832 aa17.24■□□□□ 0.35
HOXB3-206ENST00000471459 MFSD5Q6N075 450 aa17.24■□□□□ 0.35
HOXB3-206ENST00000471459 FAM126BQ8IXS8 530 aa17.24■□□□□ 0.35
HOXB3-206ENST00000471459 SLC43A3Q8NBI5 491 aa17.24■□□□□ 0.35
HOXB3-206ENST00000471459 MYL10Q9BUA6 226 aa17.24■□□□□ 0.35
HOXB3-206ENST00000471459 SPZ1Q9BXG8 430 aa17.24■□□□□ 0.35
HOXB3-206ENST00000471459 COL20A1Q9P218 1284 aa17.24■□□□□ 0.35
HOXB3-206ENST00000471459 MCM3APO60318 1980 aa17.23■□□□□ 0.35
HOXB3-206ENST00000471459 A6NJR5 290 aa17.23■□□□□ 0.35
HOXB3-206ENST00000471459 CYTH3O43739 400 aa17.23■□□□□ 0.35
HOXB3-206ENST00000471459 HOXA13P31271 388 aaPredicted RBP17.23■□□□□ 0.35
HOXB3-206ENST00000471459 GHRHRQ02643 423 aa17.23■□□□□ 0.35
HOXB3-206ENST00000471459 FCHSD1Q86WN1 690 aa17.23■□□□□ 0.35
HOXB3-206ENST00000471459 TBX21Q9UL17 535 aa17.23■□□□□ 0.35
HOXB3-206ENST00000471459 MRVI1Q9Y6F6 885 aa17.23■□□□□ 0.35
HOXB3-206ENST00000471459 CASTP20810 708 aaKnown RBP17.22■□□□□ 0.35
HOXB3-206ENST00000471459 PTGS1P23219 599 aa17.22■□□□□ 0.35
HOXB3-206ENST00000471459 CCND2P30279 289 aa17.22■□□□□ 0.35
HOXB3-206ENST00000471459 PSMC6P62333 389 aa17.22■□□□□ 0.35
HOXB3-206ENST00000471459 PURAQ00577 322 aaKnown RBP17.22■□□□□ 0.35
HOXB3-206ENST00000471459 LY6KQ17RY6 165 aa17.22■□□□□ 0.35
HOXB3-206ENST00000471459 TSGA10IPQ3SY00 556 aa17.22■□□□□ 0.35
HOXB3-206ENST00000471459 CCDC62Q6P9F0 684 aa17.22■□□□□ 0.35
HOXB3-206ENST00000471459 DHX32Q7L7V1 743 aaKnown RBP17.22■□□□□ 0.35
HOXB3-206ENST00000471459 DHX37Q8IY37 1157 aaKnown RBP17.22■□□□□ 0.35
HOXB3-206ENST00000471459 DEFB123Q8N688 67 aa17.22■□□□□ 0.35
HOXB3-206ENST00000471459 FANCBQ8NB91 859 aa17.22■□□□□ 0.35
HOXB3-206ENST00000471459 SMARCC2Q8TAQ2 1214 aa17.22■□□□□ 0.35
HOXB3-206ENST00000471459 PDCD2LQ9BRP1 358 aa17.22■□□□□ 0.35
HOXB3-206ENST00000471459 RANBP2P49792 3224 aaKnown RBP17.22■□□□□ 0.35
HOXB3-206ENST00000471459 OPLAHO14841 1288 aa17.21■□□□□ 0.35
HOXB3-206ENST00000471459 REC8O95072 547 aa17.21■□□□□ 0.35
HOXB3-206ENST00000471459 CD4P01730 458 aa17.21■□□□□ 0.35
HOXB3-206ENST00000471459 ITGB8P26012 769 aa17.21■□□□□ 0.35
HOXB3-206ENST00000471459 LAMC2Q13753 1193 aa17.21■□□□□ 0.35
HOXB3-206ENST00000471459 FAM47CQ5HY64 1035 aa17.21■□□□□ 0.35
HOXB3-206ENST00000471459 VSIG10LQ86VR7 867 aa17.21■□□□□ 0.35
HOXB3-206ENST00000471459 SGMS1Q86VZ5 419 aa17.21■□□□□ 0.35
HOXB3-206ENST00000471459 COPS5Q92905 334 aa17.21■□□□□ 0.35
HOXB3-206ENST00000471459 RNPC3Q96LT9 517 aaKnown RBP17.21■□□□□ 0.35
HOXB3-206ENST00000471459 PPP1R12CQ9BZL4 782 aa17.21■□□□□ 0.35
HOXB3-206ENST00000471459 HIPK3Q9H422 1215 aa17.21■□□□□ 0.35
HOXB3-206ENST00000471459 TGFB3P10600 412 aa17.2■□□□□ 0.34
HOXB3-206ENST00000471459 CHMP4BP1P59074 171 aa17.2■□□□□ 0.34
HOXB3-206ENST00000471459 PGM5Q15124 567 aa17.2■□□□□ 0.34
HOXB3-206ENST00000471459 DGKDQ16760 1214 aa17.2■□□□□ 0.34
HOXB3-206ENST00000471459 SLC35G1Q2M3R5 365 aa17.2■□□□□ 0.34
HOXB3-206ENST00000471459 GNPTABQ3T906 1256 aa17.2■□□□□ 0.34
HOXB3-206ENST00000471459 C9orf50Q5SZB4 431 aa17.2■□□□□ 0.34
HOXB3-206ENST00000471459 AFG1LQ8WV93 481 aa17.2■□□□□ 0.34
HOXB3-206ENST00000471459 LRRC2Q9BYS8 371 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms