RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 PIGSQ96S52 555 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 GOLGA6AQ9NYA3 693 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 TUBB4BP68371 445 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 MAP9Q49MG5 647 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 ZNF444Q8N0Y2 327 aaPredicted RBP13.44□□□□□ -0.26
VARS2-205ENST00000469358 MTMR8Q96EF0 704 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 PURBQ96QR8 312 aaKnown RBP13.44□□□□□ -0.26
VARS2-205ENST00000469358 TANGO6Q9C0B7 1094 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 NDST4Q9H3R1 872 aa13.44□□□□□ -0.26
VARS2-205ENST00000469358 TDP2O95551 362 aa13.43□□□□□ -0.26
VARS2-205ENST00000469358 PCP11498 1178 aaKnown RBP13.43□□□□□ -0.26
VARS2-205ENST00000469358 SLC1A4P43007 532 aa13.43□□□□□ -0.26
VARS2-205ENST00000469358 CACNB1Q02641 598 aaPredicted RBP13.43□□□□□ -0.26
VARS2-205ENST00000469358 DGKHQ86XP1 1220 aa13.43□□□□□ -0.26
VARS2-205ENST00000469358 COA7Q96BR5 231 aa13.43□□□□□ -0.26
VARS2-205ENST00000469358 OSBPL9Q96SU4 736 aa13.43□□□□□ -0.26
VARS2-205ENST00000469358 SH2D4AQ9H788 454 aa13.43□□□□□ -0.26
VARS2-205ENST00000469358 RBM12Q9NTZ6 932 aaKnown RBP13.43□□□□□ -0.26
VARS2-205ENST00000469358 SAMM50Q9Y512 469 aa13.43□□□□□ -0.26
VARS2-205ENST00000469358 SLC37A4O43826 429 aa13.43□□□□□ -0.26
VARS2-205ENST00000469358 SLC20A2Q08357 652 aa13.43□□□□□ -0.26
VARS2-205ENST00000469358 MSL3Q8N5Y2 521 aaKnown RBP13.43□□□□□ -0.26
VARS2-205ENST00000469358 AENQ8WTP8 325 aaKnown RBP13.43□□□□□ -0.26
VARS2-205ENST00000469358 FGFBP2Q9BYJ0 223 aa13.43□□□□□ -0.26
VARS2-205ENST00000469358 VIPAS39Q9H9C1 493 aa13.43□□□□□ -0.26
VARS2-205ENST00000469358 SIK3Q9Y2K2 1263 aa13.43□□□□□ -0.26
VARS2-205ENST00000469358 A0A1B0GUL6 1792 aa13.43□□□□□ -0.26
VARS2-205ENST00000469358 ABCA3Q99758 1704 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 GRB10Q13322 594 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 VWA3BQ502W6 1294 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 SBK1Q52WX2 424 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 TMED8Q6PL24 325 aaPredicted RBP13.42□□□□□ -0.26
VARS2-205ENST00000469358 CCDC170Q8IYT3 715 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 BLOC1S4Q9NUP1 217 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 MKRN1Q9UHC7 482 aaKnown RBP13.42□□□□□ -0.26
VARS2-205ENST00000469358 ZNF652Q9Y2D9 606 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 ATP1A2P50993 1020 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 NONOQ15233 471 aaKnown RBP eCLIP13.42□□□□□ -0.26
VARS2-205ENST00000469358 AMIGO3Q86WK7 504 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 EHBP1Q8NDI1 1231 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 FAM76AQ8TAV0 307 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 PLAGL2Q9UPG8 496 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 TARSL2A2RTX5 802 aaKnown RBP13.42□□□□□ -0.26
VARS2-205ENST00000469358 PALM3A6NDB9 673 aaPredicted RBP13.42□□□□□ -0.26
VARS2-205ENST00000469358 RPS6KA5O75582 802 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 FTCDO95954 541 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 TUBBP07437 444 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 FAM153BP0C7A2 387 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 RASA1P20936 1047 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 MAGEA1P43355 309 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 IRAK1P51617 712 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 FAM153CQ494X1 144 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 TDRD12Q587J7 1177 aaKnown RBP13.42□□□□□ -0.26
VARS2-205ENST00000469358 PNMA5Q96PV4 448 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 NUP58Q9BVL2 599 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 TSPYL1Q9H0U9 437 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 GOLPH3Q9H4A6 298 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 SH3GLB2Q9NR46 395 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 FAM153AQ9UHL3 310 aa13.42□□□□□ -0.26
VARS2-205ENST00000469358 BICDL2A1A5D9 508 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 PPFIA4O75335 1185 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 TACC1O75410 805 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 KRT14P02533 472 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 SSBP05455 408 aaKnown RBP eCLIP13.41□□□□□ -0.26
VARS2-205ENST00000469358 SLURP2P0DP57 97 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 NFIXQ14938 502 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 CCDC181Q5TID7 509 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 IFT81Q8WYA0 676 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 ERGIC2Q96RQ1 377 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 C7orf25Q9BPX7 421 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 ANKIB1Q9P2G1 1089 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 FAM184BQ9ULE4 1060 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 JRKLQ9Y4A0 524 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 USP17L5A8MUK1 530 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 ECM1Q16610 540 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 HAUS3Q68CZ6 603 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 NEK8Q86SG6 692 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 NBPF5PQ86XG9 351 aaPredicted RBP13.41□□□□□ -0.26
VARS2-205ENST00000469358 ZSCAN29Q8IWY8 852 aaPredicted RBP13.41□□□□□ -0.26
VARS2-205ENST00000469358 LDHBP07195 334 aaKnown RBP13.41□□□□□ -0.26
VARS2-205ENST00000469358 GUCY2FP51841 1108 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 TTMPQ5BVD1 217 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 TLR10Q9BXR5 811 aa13.41□□□□□ -0.26
VARS2-205ENST00000469358 ANO9A1A5B4 782 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 USO1O60763 962 aaKnown RBP13.4□□□□□ -0.26
VARS2-205ENST00000469358 GLI1P08151 1106 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 LIG3P49916 1009 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 GNGT1P63211 74 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 NELFCDQ8IXH7 590 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 TRIM58Q8NG06 486 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 NLRP3Q96P20 1036 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 ZMYND12Q9H0C1 365 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 DOT1LQ8TEK3 1739 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 EDIL3O43854 480 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 NOP2P46087 812 aaKnown RBP13.4□□□□□ -0.26
VARS2-205ENST00000469358 CARSP49589 748 aaKnown RBP13.4□□□□□ -0.26
VARS2-205ENST00000469358 PDCLQ13371 301 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 CENPPQ6IPU0 288 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 CACNA2D4Q7Z3S7 1137 aa13.4□□□□□ -0.26
VARS2-205ENST00000469358 RETREG2Q8NC44 543 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms