RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 USH1GQ495M9 461 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 ANKRD20A3Q5VUR7 823 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 DHTKD1Q96HY7 919 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 VPS37BQ9H9H4 285 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 PLCB1Q9NQ66 1216 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 PANK4Q9NVE7 773 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 DAAM1Q9Y4D1 1078 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 MROH7-TTC4A0A0A0MT08 1334 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 NEDD4P46934 1319 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 DDX39AO00148 427 aaKnown RBP11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 IRAK1P51617 712 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 BIRC3Q13489 604 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 MESDQ14696 234 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 RETREG2Q8NC44 543 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 SPATA4Q8NEY3 305 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 PCDH11XQ9BZA7 1347 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 PCDH11YQ9BZA8 1340 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 SENP2Q9HC62 589 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 ANKRD26Q9UPS8 1709 aa11.6□□□□□ -0.55
TRAPPC10-207ENST00000468864 SETD1BQ9UPS6 1966 aaKnown RBP11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 LGALS16A8MUM7 142 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 SASH3O75995 380 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 PCCAP05165 728 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 MYO1EQ12965 1108 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 MAN2A1Q16706 1144 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 EXOC3L4Q17RC7 722 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 PPP1R1BQ9UD71 204 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 MROH5Q6ZUA9 1318 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 PGRMC1O00264 195 aaKnown RBP11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 PALMO75781 387 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 DESP17661 470 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 KCNJ6P48051 423 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 GFPT1Q06210 699 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 TMC4Q7Z404 712 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 SMIM24O75264 130 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 BAG2O95816 211 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 MUM1L1Q5H9M0 696 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 BEND6Q5SZJ8 279 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 FYB2Q5VWT5 728 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 FOXR1Q6PIV2 292 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 DDX12PQ92771 950 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 OSBPL9Q96SU4 736 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 DDX47Q9H0S4 455 aaKnown RBP11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 GGT7Q9UJ14 662 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 KIAA1024Q9UPX6 916 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 USP6P35125 1406 aa11.59□□□□□ -0.55
TRAPPC10-207ENST00000468864 CALUO43852 315 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 LRRN2O75325 713 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 SUN1O94901 812 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 NR2F2P24468 414 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 HSPA1LP34931 641 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 RFC4P35249 363 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 ADCY8P40145 1251 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 MAGOHP61326 146 aaKnown RBP11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 FKBP3Q00688 224 aaKnown RBP11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 RASIP1Q5U651 963 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 HAUS3Q68CZ6 603 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 CCDC13Q8IYE1 715 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 LRRC47Q8N1G4 583 aaKnown RBP11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 GDAP1Q8TB36 358 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 MS4A14Q96JA4 679 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 FAM167BQ9BTA0 163 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 AGPAT5Q9NUQ2 364 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 SPATS2LQ9NUQ6 558 aaKnown RBP11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 TUBE1Q9UJT0 475 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 ASAP1Q9ULH1 1129 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 H0Y3Z8 333 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 MYO1FO00160 1098 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 THAP12O43422 761 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 SNX1Q13596 522 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 RASGRF1Q13972 1273 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 COL9A3Q14050 684 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 CYP4F22Q6NT55 531 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 TPH2Q8IWU9 490 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 LARP4BQ92615 738 aaKnown RBP11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 HPS3Q969F9 1004 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 CXorf56Q9H5V9 222 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 ZNF609O15014 1411 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 POC1B-GALNT4F8VUJ3 575 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 TBC1D10BQ4KMP7 808 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 EYA3Q99504 573 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 VCXQ9H320 206 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 FAM114A2Q9NRY5 505 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 ARPP21Q9UBL0 812 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 ADD3Q9UEY8 706 aaKnown RBP11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 ATP7BP35670 1465 aa11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 VIRMAQ69YN4 1812 aaKnown RBP11.58□□□□□ -0.56
TRAPPC10-207ENST00000468864 LRRC53A6NM62 1247 aa11.57□□□□□ -0.56
TRAPPC10-207ENST00000468864 CLIC2O15247 247 aa11.57□□□□□ -0.56
TRAPPC10-207ENST00000468864 GAS8O95995 478 aa11.57□□□□□ -0.56
TRAPPC10-207ENST00000468864 PABPC4Q13310 644 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRAPPC10-207ENST00000468864 NUGGCQ68CJ6 796 aa11.57□□□□□ -0.56
TRAPPC10-207ENST00000468864 TPTE2Q6XPS3 522 aa11.57□□□□□ -0.56
TRAPPC10-207ENST00000468864 LY9Q9HBG7 655 aa11.57□□□□□ -0.56
TRAPPC10-207ENST00000468864 DISC1Q9NRI5 854 aa11.57□□□□□ -0.56
TRAPPC10-207ENST00000468864 SNX24Q9Y343 169 aa11.57□□□□□ -0.56
TRAPPC10-207ENST00000468864 A0A1B0GTH6 734 aa11.57□□□□□ -0.56
TRAPPC10-207ENST00000468864 CIAO1O76071 339 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms